Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.7e-26 120.6 66 100.0
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 8.0e-10 66.6 54 70.4
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-07 59.3 103 43.7
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-07 59.3 40 77.5
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-07 59.3 103 43.7
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.7e-07 58.9 40 75.0
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.7e-07 58.9 40 75.0
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-07 58.5 40 72.5
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 2.2e-07 58.5 48 66.7
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 2.2e-07 58.5 47 68.1
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 3.7e-07 57.8 48 66.7
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 3.7e-07 57.8 48 64.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 3.7e-07 57.8 40 70.0
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 3.7e-07 57.8 48 66.7
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 4.9e-07 57.4 48 64.6
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 66.7
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 6.4e-07 57.0 103 43.7
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 6.4e-07 57.0 103 41.7
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 6.4e-07 57.0 103 43.7
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 6.4e-07 57.0 103 43.7
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 6.4e-07 57.0 48 64.6
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 6.4e-07 57.0 103 42.7
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 8.3e-07 56.6 48 64.6
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 8.3e-07 56.6 48 62.5
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 8.3e-07 56.6 48 64.6
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 8.3e-07 56.6 48 64.6
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 8.3e-07 56.6 40 67.5
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 1.1e-06 56.2 103 42.7
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.1e-06 56.2 48 62.5
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.1e-06 56.2 48 62.5
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.1e-06 56.2 48 64.6
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.1e-06 56.2 48 62.5
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 1.1e-06 56.2 48 64.6
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.1e-06 56.2 40 65.0
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 1.1e-06 56.2 48 64.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.4e-06 55.8 48 62.5
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.4e-06 55.8 48 62.5
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 1.4e-06 55.8 48 62.5
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 1.4e-06 55.8 48 62.5
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 1.4e-06 55.8 48 62.5
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 1.4e-06 55.8 103 41.7
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.4e-06 55.8 48 64.6
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.9e-06 55.5 48 62.5
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.9e-06 55.5 48 62.5
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.9e-06 55.5 48 64.6
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.9e-06 55.5 48 64.6
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.9e-06 55.5 48 58.3
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 2.4e-06 55.1 40 72.5
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 2.4e-06 55.1 103 41.7
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.4e-06 55.1 48 62.5
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 3.2e-06 54.7 48 62.5
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 3.2e-06 54.7 48 64.6
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 3.2e-06 54.7 103 41.7
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 3.2e-06 54.7 103 41.7
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 3.2e-06 54.7 48 62.5
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 3.2e-06 54.7 48 62.5
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 4.1e-06 54.3 40 67.5
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 4.1e-06 54.3 48 60.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 4.1e-06 54.3 48 62.5
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.4e-06 53.9 48 64.6
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 5.4e-06 53.9 48 60.4
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 7.0e-06 53.5 48 62.5
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 7.0e-06 53.5 48 62.5
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 7.0e-06 53.5 103 41.7
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 7.0e-06 53.5 40 67.5
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 7.0e-06 53.5 48 62.5
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 7.0e-06 53.5 103 38.8
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 7.0e-06 53.5 48 60.4


User provided reference genes

Program Settings