Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 8.5e-65 250.4 143 100.0
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.5e-34 148.7 151 63.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.3e-33 146.7 145 66.2
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 1.5e-32 143.3 103 85.4
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 4.3e-32 141.7 122 74.6
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 7.3e-32 141.0 100 86.0
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 9.5e-32 140.6 145 66.2
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 9.5e-32 140.6 121 75.2
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.2e-31 140.2 112 78.6
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.6e-31 139.8 145 64.8
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.1e-31 139.4 102 82.4
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 2.8e-31 139.0 102 82.4
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 2.8e-31 139.0 102 82.4
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 3.6e-31 138.7 108 80.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 6.1e-31 137.9 121 73.6
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 6.1e-31 137.9 121 73.6
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 6.1e-31 137.9 101 82.2
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 6.1e-31 137.9 98 82.7
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 8.0e-31 137.5 102 79.4
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 8.0e-31 137.5 105 78.1
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.0e-30 137.1 102 81.4
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.0e-30 137.1 120 71.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-30 136.7 121 72.7
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.4e-30 136.7 103 81.6
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.8e-30 136.3 121 71.1
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.3e-30 136.0 108 75.9
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.3e-30 136.0 108 75.9
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 2.3e-30 136.0 110 78.2
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 4.0e-30 135.2 103 80.6
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 4.0e-30 135.2 105 79.0
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 5.2e-30 134.8 112 75.9
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 6.8e-30 134.4 101 82.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 8.9e-30 134.0 102 80.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 8.9e-30 134.0 107 76.6
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.2e-29 133.7 108 73.1
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.2e-29 133.7 112 74.1
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.2e-29 133.7 102 81.4
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.2e-29 133.7 105 77.1
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.2e-29 133.7 105 78.1
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.5e-29 133.3 107 72.9
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.0e-29 132.9 99 80.8
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.0e-29 132.9 99 80.8
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.0e-29 132.9 102 78.4
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 2.6e-29 132.5 103 79.6
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 2.6e-29 132.5 108 77.8
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 3.4e-29 132.1 96 78.1
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 3.4e-29 132.1 110 73.6
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.4e-29 132.1 108 77.8
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 4.4e-29 131.7 128 67.2
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 5.8e-29 131.3 102 78.4
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.8e-29 131.3 104 77.9
arahy.Tifrunner.gnm1.ann1.X1AAWH Arachis hypogaea HOM05D018710 ORTHO05D023780 7.5e-29 131.0 67 98.5
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 7.5e-29 131.0 107 74.8
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 9.8e-29 130.6 96 75.0
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.3e-28 130.2 100 78.0
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.7e-28 129.8 97 81.4
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.2e-28 129.4 99 78.8
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.2e-28 129.4 123 67.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.2e-28 129.4 103 76.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 2.2e-28 129.4 103 77.7
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.2e-28 129.4 103 77.7
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 2.9e-28 129.0 116 67.2
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 2.9e-28 129.0 99 78.8
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.9e-28 129.0 121 65.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.9e-28 129.0 142 61.3
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 2.9e-28 129.0 110 72.7
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.9e-28 129.0 101 72.3
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 3.7e-28 128.6 124 66.1
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 4.9e-28 128.3 112 67.9
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 6.4e-28 127.9 142 61.3
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.3e-28 127.5 93 78.5
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 8.3e-28 127.5 102 77.5
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 8.3e-28 127.5 103 77.7
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.1e-27 127.1 103 73.8
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.1e-27 127.1 98 79.6
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.1e-27 127.1 100 79.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.4e-27 126.7 107 70.1
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 1.8e-27 126.3 103 75.7
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.2e-27 125.6 94 76.6
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 3.2e-27 125.6 103 75.7
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 4.1e-27 125.2 103 74.8
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.4e-27 124.8 126 65.1
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 7.0e-27 124.4 97 59.8
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 9.2e-27 124.0 97 79.4
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 4.6e-26 121.7 97 77.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 7.8e-26 120.9 99 73.7
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 1.0e-25 120.6 97 72.2
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.0e-25 120.6 78 73.1
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.0e-25 120.6 96 71.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.0e-25 120.6 96 71.9
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.3e-25 120.2 99 76.8
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.7e-25 119.8 94 76.6
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.3e-25 119.4 108 74.1
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 6.6e-25 117.9 75 64.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.5e-24 116.7 89 78.7
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.6e-23 113.2 98 71.4
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.6e-23 113.2 138 59.4
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 8.0e-23 110.9 92 72.8
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 8.9e-22 107.5 80 81.2
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.5e-21 106.7 93 69.9
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.4e-19 100.1 89 67.4
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 5.4e-19 98.2 72 83.3
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.2e-18 97.1 72 83.3
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 4.6e-18 95.1 81 70.4
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.5e-16 89.4 72 72.2
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 5.1e-09 65.1 43 72.1


User provided reference genes

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