Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LE3KL9 Arachis hypogaea HOM05D007421 ORTHO05D009203 2.0e-83 312.4 156 100.0
arahy.Tifrunner.gnm1.ann1.VL1QZD Arachis hypogaea HOM05D007421 ORTHO05D009203 2.0e-83 312.4 156 100.0
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 1.8e-20 103.2 131 51.9
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 1.0e-18 97.4 125 47.2
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 8.0e-16 87.8 164 38.4
VMungo0251G1640 Vigna mungo HOM05D007421 ORTHO05D009203 8.8e-15 84.3 130 43.8
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 4.4e-14 82.0 132 48.5
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 7.4e-14 81.3 128 44.5
Phvul.002G206600 Phaseolus vulgaris HOM05D007421 ORTHO05D009203 7.0e-12 74.7 122 45.9
Glyma.05G120200 Glycine max HOM05D007421 ORTHO05D009203 1.6e-11 73.6 140 39.3
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 3.5e-11 72.4 168 32.7
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 5.9e-11 71.6 126 39.7
Glyma.08G075000 Glycine max HOM05D007421 ORTHO05D009203 1.3e-10 70.5 129 38.8
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 6.5e-10 68.2 90 41.1
Medtr4g094298 Medicago truncatula HOM05D007421 ORTHO05D009203 1.9e-09 66.6 75 49.3
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 3.2e-09 65.9 127 36.2
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 1.6e-08 63.5 153 37.3
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 2.1e-08 63.2 113 40.7
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 2.7e-08 62.8 143 37.8
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 8.0e-08 61.2 53 56.6
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 8.0e-08 61.2 122 37.7
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 1.0e-07 60.8 54 55.6
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 1.8e-07 60.1 103 37.9
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 2.3e-07 59.7 137 35.8
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 2.3e-07 59.7 137 35.8
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 4.0e-07 58.9 141 34.0
Ca_02335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 6.7e-07 58.2 80 46.2
FAN08G3106 Fragaria x ananassa HOM05D007421 ORTHO05D009203 8.8e-07 57.8 86 39.5
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 1.5e-06 57.0 124 37.1
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 2.0e-06 56.6 90 36.7
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 2.6e-06 56.2 49 57.1
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 3.3e-06 55.8 55 49.1
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 3.3e-06 55.8 143 35.0
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 4.4e-06 55.5 125 32.8
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 7.5e-06 54.7 159 30.8
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 7.5e-06 54.7 50 52.0
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 7.5e-06 54.7 79 38.0
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 7.5e-06 54.7 169 32.5
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 9.7e-06 54.3 50 52.0


User provided reference genes

Program Settings