Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 4.5e-112 407.9 200 100.0
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 7.9e-109 397.1 200 97.0
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 1.5e-67 260.0 194 66.0
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 7.4e-67 257.7 213 62.4
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 2.4e-65 252.7 204 62.7
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 4.1e-65 251.9 216 58.8
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 7.0e-65 251.1 206 61.7
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 4.5e-64 248.4 214 60.3
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 7.7e-64 247.7 199 63.8
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.7e-63 246.5 207 62.8
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 3.8e-63 245.4 219 58.4
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 8.5e-63 244.2 204 62.3
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 1.9e-62 243.0 199 60.8
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 2.5e-62 242.7 190 65.3
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 3.2e-62 242.3 198 60.1
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 4.2e-62 241.9 203 61.6
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 1.2e-61 240.4 205 60.5
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 2.1e-61 239.6 206 60.2
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 3.6e-61 238.8 210 61.9
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 6.1e-61 238.0 192 64.6
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 8.0e-61 237.7 204 59.3
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 8.0e-61 237.7 220 59.1
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 8.0e-61 237.7 208 57.2
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.4e-60 236.9 202 61.4
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 1.8e-60 236.5 194 60.8
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 3.0e-60 235.7 207 58.5
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 3.0e-60 235.7 200 60.5
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 4.0e-60 235.3 200 59.5
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 5.2e-60 235.0 196 62.2
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 8.8e-60 234.2 217 57.6
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 8.8e-60 234.2 209 57.9
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.2e-59 233.8 196 61.7
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 1.2e-59 233.8 199 61.3
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 1.2e-59 233.8 190 62.1
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 2.6e-59 232.6 203 58.1
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 2.6e-59 232.6 210 58.1
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 3.3e-59 232.3 209 56.9
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 3.3e-59 232.3 204 60.3
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 4.4e-59 231.9 197 59.4
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 4.4e-59 231.9 215 58.1
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 5.7e-59 231.5 197 59.4
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 7.5e-59 231.1 213 56.3
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.3e-58 230.3 206 57.3
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.3e-58 230.3 198 59.6
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 1.7e-58 229.9 198 58.6
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 1.7e-58 229.9 181 61.9
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 2.2e-58 229.6 213 57.7
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 3.7e-58 228.8 181 60.8
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 3.7e-58 228.8 205 56.6
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 3.7e-58 228.8 206 58.3
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 4.8e-58 228.4 187 59.4
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 4.8e-58 228.4 191 58.6
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 6.3e-58 228.0 182 62.1
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 6.3e-58 228.0 222 53.2
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 6.3e-58 228.0 206 59.2
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 6.3e-58 228.0 178 61.8
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 8.2e-58 227.6 178 63.5
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 1.1e-57 227.3 216 55.1
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 1.1e-57 227.3 222 54.1
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 1.1e-57 227.3 205 58.5
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 1.4e-57 226.9 184 62.0
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.4e-57 226.9 178 61.2
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 1.8e-57 226.5 193 60.6
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 3.1e-57 225.7 184 61.4
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 4.1e-57 225.3 178 62.9
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 7.0e-57 224.6 177 62.1
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 1.2e-56 223.8 205 55.6
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 1.6e-56 223.4 178 63.5
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 1.6e-56 223.4 193 57.5
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 1.6e-56 223.4 201 60.2
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.0e-56 223.0 205 55.6
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 2.7e-56 222.6 193 58.5
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 3.5e-56 222.2 176 59.7
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 4.5e-56 221.9 200 56.5
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 4.5e-56 221.9 178 62.9
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 4.5e-56 221.9 178 62.9
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 5.9e-56 221.5 201 59.7
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 1.0e-55 220.7 217 53.9
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 1.3e-55 220.3 206 53.9
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 1.3e-55 220.3 202 56.4
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 1.7e-55 219.9 192 59.9
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.7e-55 219.9 193 58.5
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 2.9e-55 219.2 200 55.0
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 8.5e-55 217.6 199 55.3
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 8.5e-55 217.6 188 57.4
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 9.4e-54 214.2 200 54.5
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 9.4e-54 214.2 200 54.5
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 1.2e-53 213.8 199 54.8
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 1.4e-52 210.3 198 55.6
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 1.4e-52 210.3 196 55.6
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.8e-52 209.9 184 57.6
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 4.0e-52 208.8 209 53.1
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 6.8e-52 208.0 190 55.8
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 2.0e-51 206.5 174 62.6
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 4.4e-51 205.3 158 64.6
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 2.2e-50 203.0 158 65.8
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 1.4e-49 200.3 183 57.9
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 3.8e-47 192.2 161 62.1
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.3e-42 177.2 184 50.5
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 1.1e-41 174.1 188 50.0
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.0e-39 167.5 115 73.0
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.8e-37 159.5 113 64.6
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 4.0e-36 155.6 221 40.7
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 6.8e-36 154.8 149 54.4
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.0e-35 153.3 194 45.9
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 2.6e-35 152.9 142 57.7
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 7.5e-35 151.4 144 54.2
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 3.7e-34 149.1 127 55.1
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 1.2e-32 144.1 155 50.3
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 1.3e-31 140.6 132 50.8
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 6.8e-28 128.3 153 44.4
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 8.9e-28 127.9 142 48.6
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 6.6e-23 111.7 120 52.5
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 4.0e-20 102.4 105 50.5
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 9.9e-19 97.8 135 44.4
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.9e-17 93.6 68 64.7
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 7.3e-14 81.6 58 69.0
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.4e-12 76.6 148 34.5
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 4.0e-12 75.9 50 66.0
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 4.6e-08 62.4 86 40.7
Cre14.g615250 Chlamydomonas reinhardtii HOM05D006792 ORTHO05D008489 6.0e-08 62.0 84 42.9
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 6.6e-07 58.5 64 48.4
MCO15G478 Micromonas commoda HOM05D005776 ORTHO05D007333 1.1e-06 57.8 109 34.9


User provided reference genes

Program Settings