Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 6.1e-58 227.3 113 100.0
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 1.2e-42 176.4 153 66.0
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 3.2e-22 108.6 147 47.6
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 7.0e-22 107.5 207 38.6
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 2.7e-21 105.5 146 47.3
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 2.5e-19 99.0 148 44.6
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 4.3e-19 98.2 207 36.2
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 1.4e-17 93.2 149 44.3
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 1.2e-16 90.1 149 43.0
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 6.4e-15 84.3 147 42.2
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 6.4e-15 84.3 161 36.6
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 6.6e-12 74.3 147 36.7
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 6.6e-12 74.3 147 36.7
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 8.6e-12 73.9 153 35.3
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 2.5e-11 72.4 147 34.0
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 2.5e-11 72.4 149 34.2
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 3.3e-11 72.0 147 34.0
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 3.3e-11 72.0 147 34.7
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 5.6e-11 71.2 148 35.8
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 7.3e-11 70.9 153 34.6
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.6e-10 69.7 152 32.9
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.1e-10 69.3 147 34.7
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 2.1e-10 69.3 195 30.8
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 6.2e-10 67.8 151 35.8
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 6.2e-10 67.8 101 42.6
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 8.1e-10 67.4 70 50.0
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 1.1e-09 67.0 149 34.2
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 1.4e-09 66.6 136 35.3
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 1.8e-09 66.2 153 33.3
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 3.1e-09 65.5 141 32.6
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 4.0e-09 65.1 151 35.8
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 4.0e-09 65.1 144 34.7
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 4.0e-09 65.1 40 72.5
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 1.2e-08 63.5 40 72.5
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.5e-08 63.2 129 34.9
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 4.4e-08 61.6 161 35.4
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 4.4e-08 61.6 144 32.6
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 5.8e-08 61.2 150 33.3
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.7e-07 59.7 40 67.5
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 1.7e-07 59.7 98 37.8
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 2.9e-07 58.9 146 33.6
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 6.4e-07 57.8 48 54.2
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 8.3e-07 57.4 41 63.4
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 8.3e-07 57.4 50 56.0
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.1e-06 57.0 152 28.9
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 1.1e-06 57.0 39 66.7
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 1.9e-06 56.2 48 60.4
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 2.4e-06 55.8 47 63.8
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.2e-06 55.5 37 64.9
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 3.2e-06 55.5 37 64.9
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 4.1e-06 55.1 136 31.6
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 4.1e-06 55.1 39 61.5
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 7.1e-06 54.3 36 66.7
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 7.1e-06 54.3 147 32.7
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 9.2e-06 53.9 37 67.6
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 9.2e-06 53.9 39 61.5


User provided reference genes

Program Settings