Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LAST4K Arachis hypogaea HOM05D000963 ORTHO05D005131 8.6e-122 440.3 213 100.0
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 1.5e-65 253.4 210 67.1
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 1.5e-65 253.4 210 67.1
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 8.5e-53 211.1 169 66.3
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 1.3e-45 187.2 240 48.8
VMungo1215G3364 Vigna mungo HOM05D001592 ORTHO05D001533 2.8e-40 169.5 94 84.0
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 4.1e-39 165.6 177 54.2
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.6e-38 163.7 94 81.9
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 1.6e-38 163.7 184 51.1
arahy.Tifrunner.gnm1.ann1.A049RL Arachis hypogaea HOM05D000963 ORTHO05D005131 3.5e-38 162.5 97 80.4
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-36 156.8 134 62.7
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-36 156.8 134 62.7
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-36 156.8 134 62.7
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-36 156.8 134 62.7
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 4.2e-36 155.6 134 61.2
Medtr3g035650 Medicago truncatula HOM05D000963 ORTHO05D005131 8.8e-34 147.9 85 81.2
Sed0026848 Sechium edule HOM05D000963 ORTHO05D005131 3.4e-33 146.0 79 83.5
Sopen08g004620 Solanum pennellii HOM05D001396 ORTHO05D000493 3.1e-31 139.4 95 71.6
arahy.Tifrunner.gnm1.ann1.9M10FC Arachis hypogaea HOM05D000940 ORTHO05D000782 1.5e-25 120.6 77 72.7
CsaV3_4G036830 Cucumis sativus L. HOM05D000963 ORTHO05D005131 2.2e-24 116.7 66 80.3
SGA_v2.0_scaffold140G35502 Striga asiatica HOM05D000963 ORTHO05D005131 3.2e-23 112.8 65 76.9
Phvul.002G028400 Phaseolus vulgaris HOM05D000963 ORTHO05D005131 2.0e-22 110.2 86 65.1
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.5e-22 109.4 60 83.3
Solyc00g500039.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.0e-21 106.3 69 75.4
Solyc00g500044.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.0e-21 106.3 69 75.4
Solyc00g500083.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.0e-21 106.3 69 75.4
Solyc00g500301.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.0e-21 106.3 69 75.4
Solyc00g500325.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.0e-21 106.3 69 75.4
arahy.Tifrunner.gnm1.ann1.7DQW64 Arachis hypogaea HOM05D000963 ORTHO05D005131 8.6e-21 104.8 74 67.6
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.3e-20 102.4 79 65.8
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-20 102.4 74 68.9
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 5.6e-20 102.1 78 64.1
arahy.Tifrunner.gnm1.ann1.ZJEP1E Arachis hypogaea HOM05D000963 ORTHO05D011791 2.8e-19 99.8 59 81.4
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.3e-18 96.7 56 76.8
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.3e-18 96.7 190 39.5
arahy.Tifrunner.gnm1.ann1.GV9JXL Arachis hypogaea HOM05D000743 ORTHO05D005131 1.5e-17 94.0 56 76.8
Sopen01g026990 Solanum pennellii HOM05D000963 ORTHO05D005131 1.5e-17 94.0 66 71.2
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 7.5e-17 91.7 59 76.3
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.7e-16 90.5 59 76.3
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 1.1e-15 87.8 53 71.7
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 3.2e-15 86.3 115 49.6
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 5.4e-15 85.5 92 56.5
Potri.002G073450 Populus trichocarpa HOM05D000963 ORTHO05D005131 3.9e-13 79.3 150 37.3
SabraMtG0005800 Salix brachista HOM05D000963 ORTHO05D011791 3.9e-13 79.3 48 79.2
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 1.1e-12 77.8 140 42.9
TPR.G8529 Trifolium pratense HOM05D000060 ORTHO05D000082 4.3e-12 75.9 52 76.9
FAN10G3847 Fragaria x ananassa HOM05D000367 ORTHO05D001227 7.3e-12 75.1 44 81.8
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.2e-11 74.3 42 85.7
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 2.1e-11 73.6 43 86.0
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.4e-10 70.9 76 55.3
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 3.1e-10 69.7 106 43.4
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 4.4e-09 65.9 81 49.4
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 6.4e-08 62.0 40 75.0
BolSC46t60969H Brassica oleracea HOM05D000963 ORTHO05D005131 2.4e-07 60.1 43 69.8
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 4.1e-07 59.3 33 81.8
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 4.1e-07 59.3 33 81.8
Gorai.008G144300 Gossypium raimondii HOM05D000963 ORTHO05D005131 7.1e-07 58.5 49 57.1
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 1.6e-06 57.4 38 76.3
BcaB04g17971 Brassica carinata HOM05D009885 ORTHO05D015988 1.6e-06 57.4 71 50.7
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-06 57.4 33 78.8
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.1e-06 57.0 49 61.2
arahy.Tifrunner.gnm1.ann1.G70FPN Arachis hypogaea HOM05D000963 ORTHO05D005131 3.5e-06 56.2 31 77.4
BraA07t28395Z Brassica rapa HOM05D000963 ORTHO05D005131 4.6e-06 55.8 33 75.8


User provided reference genes

Program Settings