Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 1.5e-217 759.2 376 100.0
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 1.7e-205 719.2 410 90.0
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-155 552.4 279 95.7
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 4.0e-154 548.5 396 75.0
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 9.8e-153 543.9 401 72.3
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 3.0e-146 522.3 279 89.2
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 9.8e-145 517.3 279 88.5
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 1.7e-144 516.5 279 88.2
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 4.9e-144 515.0 279 87.5
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 3.2e-143 512.3 279 87.8
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 1.6e-142 510.0 279 87.5
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 2.0e-142 509.6 279 86.4
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 5.9e-142 508.1 279 86.4
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 7.8e-142 507.7 279 86.0
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 1.0e-141 507.3 279 86.4
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 3.9e-141 505.4 279 87.1
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 1.8e-138 496.5 277 85.2
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 8.9e-138 494.2 279 83.9
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 1.2e-137 493.8 279 83.9
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 1.2e-137 493.8 277 83.8
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 2.6e-137 492.7 279 83.5
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 2.6e-137 492.7 278 82.7
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 3.4e-137 492.3 277 84.1
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 2.9e-136 489.2 279 82.8
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 3.7e-136 488.8 397 69.3
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 4.9e-136 488.4 277 82.3
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 1.1e-135 487.3 279 82.4
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 1.9e-135 486.5 279 81.4
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 1.9e-135 486.5 279 81.4
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 5.4e-135 485.0 279 81.7
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 9.2e-135 484.2 279 79.9
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 1.2e-134 483.8 279 81.0
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 1.2e-134 483.8 279 82.4
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 1.2e-134 483.8 279 82.4
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 1.2e-134 483.8 279 80.3
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 1.6e-134 483.4 277 81.9
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 3.5e-134 482.3 279 80.3
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 4.6e-134 481.9 279 79.6
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 6.0e-134 481.5 279 82.1
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 6.0e-134 481.5 277 81.9
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 1.3e-133 480.3 279 79.9
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 1.3e-133 480.3 279 79.6
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 1.7e-133 479.9 279 79.9
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 1.7e-133 479.9 279 80.6
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 1.7e-133 479.9 279 79.9
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 2.3e-133 479.6 278 80.2
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 3.9e-133 478.8 279 81.4
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 6.6e-133 478.0 278 79.9
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 6.6e-133 478.0 279 79.6
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 6.6e-133 478.0 279 79.2
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 1.1e-132 477.2 277 80.9
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 1.5e-132 476.9 278 80.9
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 4.3e-132 475.3 279 79.6
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 4.3e-132 475.3 277 80.5
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 5.6e-132 474.9 277 79.1
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 1.6e-131 473.4 277 78.7
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 4.7e-131 471.9 277 78.7
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 4.7e-131 471.9 279 77.8
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 8.1e-131 471.1 279 78.9
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 1.8e-130 469.9 295 77.3
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 2.3e-130 469.5 279 78.9
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 2.3e-130 469.5 277 78.3
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 5.2e-130 468.4 277 79.1
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 5.2e-130 468.4 277 78.3
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 6.8e-130 468.0 279 77.4
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 8.9e-130 467.6 277 76.9
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 8.9e-130 467.6 277 76.2
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 1.2e-129 467.2 277 78.3
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 1.5e-129 466.8 277 76.5
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.5e-129 466.8 279 78.1
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 2.0e-129 466.5 279 78.1
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 2.6e-129 466.1 277 76.9
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 4.4e-129 465.3 316 71.2
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 4.4e-129 465.3 279 77.8
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 4.4e-129 465.3 277 78.3
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 5.8e-129 464.9 277 77.6
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 9.8e-129 464.2 422 58.3
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 1.3e-128 463.8 267 82.4
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 1.7e-128 463.4 292 75.3
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 2.2e-128 463.0 278 74.1
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 4.1e-127 458.8 303 71.9
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 7.1e-127 458.0 277 76.9
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 7.1e-127 458.0 278 74.8
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 9.2e-127 457.6 277 74.0
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 1.2e-126 457.2 278 76.6
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 1.2e-126 457.2 300 72.0
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 2.7e-126 456.1 279 76.7
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 1.3e-125 453.8 277 74.0
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 2.3e-125 453.0 277 75.1
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 3.0e-125 452.6 277 74.7
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 3.0e-125 452.6 277 74.7
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 3.0e-125 452.6 277 75.1
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 3.9e-125 452.2 276 75.4
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 3.9e-125 452.2 279 77.8
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 8.6e-125 451.1 277 74.4
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 1.9e-124 449.9 277 74.7
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 7.3e-124 448.0 277 74.4
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 7.3e-124 448.0 277 74.7
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 9.5e-124 447.6 278 74.5
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 2.1e-123 446.4 281 74.0
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 3.6e-123 445.7 281 74.0
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 1.1e-122 444.1 283 73.1
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 1.4e-122 443.7 278 73.7
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 9.9e-121 437.6 263 77.9
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 3.5e-118 429.1 279 74.2
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 3.5e-118 429.1 278 70.1
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 4.6e-118 428.7 277 72.2
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 7.8e-118 427.9 260 75.0
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 7.8e-118 427.9 243 80.7
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 6.6e-117 424.9 258 75.6
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 1.5e-116 423.7 354 63.3
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 4.3e-116 422.2 277 70.8
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 1.2e-115 420.6 278 71.2
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 1.1e-114 417.5 396 59.3
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 1.1e-114 417.5 396 59.3
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 1.8e-114 416.8 274 68.2
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 3.4e-113 412.5 242 77.3
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 4.4e-113 412.1 396 58.8
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 4.4e-113 412.1 277 70.8
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 2.9e-112 409.5 274 70.1
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 1.6e-110 403.7 239 77.8
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 1.6e-110 403.7 239 77.8
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 1.9e-108 396.7 278 65.1
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 5.8e-105 385.2 277 67.1
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 2.4e-103 379.8 263 70.0
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 1.2e-97 360.9 270 60.0
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 1.2e-97 360.9 207 80.7
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 2.9e-96 356.3 262 65.3
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 4.2e-95 352.4 285 62.8
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 4.2e-95 352.4 260 65.0
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 1.2e-94 350.9 253 64.8
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 9.6e-92 341.3 274 58.8
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 1.9e-84 317.0 194 75.8
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 1.0e-80 304.7 275 62.2
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.3e-75 287.7 207 69.1
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 2.6e-73 280.0 173 75.1
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 5.0e-72 275.8 163 81.0
arahy.Tifrunner.gnm1.ann1.PGQR8U Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-70 270.8 281 54.4
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 1.6e-70 270.8 157 80.3
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 2.0e-68 263.8 269 53.9
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 4.2e-63 246.1 279 55.2
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 5.5e-63 245.7 145 75.2
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 1.1e-55 221.5 126 82.5
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 7.2e-55 218.8 120 84.2
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 4.0e-53 213.0 131 83.2
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 1.1e-47 194.9 116 80.2
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 9.4e-47 191.8 144 68.1
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-46 191.0 194 55.2
DCAR_012871 Daucus carota HOM05D004356 ORTHO05D005542 1.8e-42 177.6 95 83.2
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-41 173.7 202 54.5
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-41 173.7 202 54.5
EL10As8g23848 Beta vulgaris HOM05D004356 ORTHO05D090264 2.4e-26 124.0 223 37.2
arahy.Tifrunner.gnm1.ann1.F3AJY4 Arachis hypogaea HOM05D004356 ORTHO05D005542 3.5e-25 120.2 61 95.1
arahy.Tifrunner.gnm1.ann1.FASD2W Arachis hypogaea HOM05D004356 ORTHO05D005542 1.8e-21 107.8 62 87.1
arahy.Tifrunner.gnm1.ann1.MUPT6T Arachis hypogaea HOM05D004356 ORTHO05D005542 1.8e-21 107.8 62 87.1
Cfa024383 Carpinus fangiana HOM05D004356 ORTHO05D124745 2.0e-20 104.4 169 36.7
Zm00001eb297900 Zea mays HOM05D004356 ORTHO05D005542 2.0e-17 94.4 49 81.6
Zm00001eb297960 Zea mays HOM05D004356 ORTHO05D444542 2.0e-17 94.4 49 81.6
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-17 94.0 51 90.2
arahy.Tifrunner.gnm1.ann1.E3H3WY Arachis hypogaea HOM05D000075 ORTHO05D000073 1.4e-10 71.6 44 84.1
arahy.Tifrunner.gnm1.ann1.03U3FR Arachis hypogaea HOM05D036434 ORTHO05D085949 1.9e-10 71.2 56 69.6
arahy.Tifrunner.gnm1.ann1.E7EHDM Arachis hypogaea HOM05D036434 ORTHO05D085916 1.9e-10 71.2 56 69.6
arahy.Tifrunner.gnm1.ann1.J07EWC Arachis hypogaea HOM05D004356 ORTHO05D005542 1.9e-10 71.2 42 83.3
SHI20361 Sapria himalayana HOM05D004356 ORTHO05D365714 1.9e-07 61.2 47 59.6


User provided reference genes

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