Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 0.0e+00 1585.5 806 100.0
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 0.0e+00 1503.0 810 95.6
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 6.4e-77 293.1 809 32.8
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 1.8e-74 285.0 804 33.3
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 1.2e-70 272.3 809 32.4
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 1.0e-69 269.2 799 31.5
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 1.4e-68 265.4 835 31.1
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 1.3e-66 258.8 801 31.8
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.3e-66 258.8 817 31.5
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 3.0e-66 257.7 809 30.8
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 6.7e-66 256.5 809 31.4
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 4.6e-51 207.2 373 42.4
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 1.4e-47 195.7 367 41.7
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 1.5e-41 175.6 788 28.2
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 1.6e-35 155.6 373 35.1
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 2.7e-35 154.8 370 37.3
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 6.1e-35 153.7 369 37.4
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 6.1e-35 153.7 369 37.7
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 1.4e-34 152.5 366 36.1
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 2.6e-33 148.3 439 34.6
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 1.7e-32 145.6 367 36.2
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 8.2e-32 143.3 392 33.9
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.8e-31 142.1 368 35.1
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.1e-31 141.4 276 38.8
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 3.1e-31 141.4 359 34.3
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 9.1e-31 139.8 276 38.4
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 2.0e-30 138.7 276 38.4
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 4.5e-30 137.5 370 33.5
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 1.0e-29 136.3 285 37.2
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 6.5e-29 133.7 278 37.4
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 7.2e-28 130.2 246 41.1
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 1.2e-27 129.4 345 34.8
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 2.1e-27 128.6 306 36.6
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 4.7e-27 127.5 298 36.2
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 8.0e-27 126.7 285 36.1
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 4.0e-26 124.4 365 33.2
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 5.2e-26 124.0 362 34.8
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 1.5e-25 122.5 286 35.3
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 2.6e-25 121.7 274 39.1
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 9.8e-25 119.8 304 34.5
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 1.7e-24 119.0 444 32.9
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 2.2e-24 118.6 279 37.3
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 3.7e-24 117.9 346 32.7
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 4.8e-24 117.5 304 35.2
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 6.3e-24 117.1 357 32.5
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 2.4e-23 115.2 378 32.0
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 9.1e-23 113.2 292 33.6
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.7e-22 111.7 301 33.9
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 1.0e-21 109.8 280 35.7
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 1.3e-21 109.4 358 32.4
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.7e-21 109.0 263 36.1
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 3.8e-21 107.8 376 31.9
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 5.0e-21 107.5 374 33.4
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 5.0e-21 107.5 381 32.0
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.2e-20 104.8 277 34.7
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.2e-20 104.4 257 35.8
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.2e-19 102.8 273 34.4
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 1.2e-19 102.8 338 33.1
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.8e-19 101.7 268 35.8
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 2.8e-19 101.7 362 30.4
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.4e-18 99.4 258 37.6
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.4e-18 99.4 257 33.9
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 2.3e-18 98.6 265 35.1
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 3.0e-18 98.2 289 33.2
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 6.8e-18 97.1 295 31.2
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 1.5e-17 95.9 256 32.8
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 3.4e-17 94.7 344 32.3
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 5.7e-17 94.0 257 31.9
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 7.5e-17 93.6 257 34.6
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 9.8e-17 93.2 273 34.1
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 9.8e-17 93.2 364 33.0
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 1.3e-16 92.8 263 31.9
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.3e-16 92.8 387 31.0
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.7e-16 92.4 270 34.8
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.2e-16 92.0 253 34.8
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 2.8e-16 91.7 375 32.0
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.7e-16 91.3 356 28.4
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 3.7e-16 91.3 262 33.2
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 6.3e-16 90.5 353 31.2
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 8.3e-16 90.1 362 30.7
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 3.1e-15 88.2 246 33.7
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 1.2e-14 86.3 282 31.6
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.6e-14 85.9 348 29.0
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 2.9e-13 81.6 288 31.2
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 1.1e-12 79.7 262 28.6
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 3.3e-12 78.2 246 33.7
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 3.0e-10 71.6 390 27.7
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 3.0e-10 71.6 290 28.3
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 1.2e-09 69.7 236 31.8
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 4.4e-09 67.8 419 28.6
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 2.2e-08 65.5 259 29.7
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 2.9e-08 65.1 423 28.4
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 4.9e-08 64.3 250 30.4
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 4.1e-07 61.2 268 31.3
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 4.1e-07 61.2 94 40.4
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 9.2e-07 60.1 253 28.1
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 1.6e-06 59.3 242 26.4
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 1.6e-06 59.3 343 25.4
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 3.5e-06 58.2 337 28.2
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 5.9e-06 57.4 298 25.8


User provided reference genes

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