Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L892YY Arachis hypogaea HOM05D008194 ORTHO05D010811 9.1e-133 476.9 232 100.0
Solyc00g500316.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 3.4e-39 166.0 203 52.2
arahy.Tifrunner.gnm1.ann1.6G4HZT Arachis hypogaea HOM05D008194 ORTHO05D010811 8.7e-35 151.4 75 100.0
arahy.Tifrunner.gnm1.ann1.C43PR6 Arachis hypogaea HOM05D008194 ORTHO05D010811 8.7e-35 151.4 75 100.0
Peaxi162Scf00040g01212 Petunia axillaris HOM05D008194 ORTHO05D010811 3.8e-30 136.0 75 90.7
Peaxi162Scf00286g00017 Petunia axillaris HOM05D008194 ORTHO05D010811 4.2e-29 132.5 169 50.3
Solyc00g244290.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 3.9e-27 125.9 68 92.6
LjContig00439g0001200 Lotus japonicus HOM05D008194 ORTHO05D010811 1.9e-26 123.6 64 96.9
LjContig00439g0021834 Lotus japonicus HOM05D008194 ORTHO05D010811 1.9e-26 123.6 64 96.9
Sopen00g013510 Solanum pennellii HOM05D008194 ORTHO05D010811 3.3e-26 122.9 68 91.2
Lsat_1_v5_gn_0_38140 Lactuca sativa HOM05D008194 ORTHO05D010811 1.3e-25 120.9 64 95.3
Nitab4.5_0000172g1570 Nicotiana tabacum HOM05D008194 ORTHO05D010811 1.3e-25 120.9 76 82.9
Hma1.2p1_0580F.1_g182760 Hydrangea macrophylla HOM05D008194 ORTHO05D010811 3.7e-25 119.4 64 93.8
Lalb_Chr10g0094521 Lupinus albus HOM05D008194 ORTHO05D010811 4.8e-25 119.0 64 92.2
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 6.3e-25 118.6 65 90.8
RcHm_v2.0_MTg0498491 Rosa chinensis HOM05D008194 ORTHO05D010811 6.3e-25 118.6 64 93.8
Nitab4.5_0000172g1790 Nicotiana tabacum HOM05D008194 ORTHO05D010811 6.9e-24 115.2 67 85.1
CsaV3_UNG208120 Cucumis sativus L. HOM05D008194 ORTHO05D010811 1.5e-23 114.0 62 93.5
Peaxi162Scf00373g00823 Petunia axillaris HOM05D008194 ORTHO05D010811 1.5e-23 114.0 62 93.5
Nitab4.5_0000172g0130 Nicotiana tabacum HOM05D008194 ORTHO05D010811 2.6e-23 113.2 68 82.4
Potri.007G062542 Populus trichocarpa HOM05D008194 ORTHO05D010811 2.2e-22 110.2 64 90.6
Thhalv10015951m.g Eutrema salsugineum HOM05D006493 ORTHO05D009864 2.9e-22 109.8 59 91.5
CDE02G4414 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 8.5e-22 108.2 61 91.8
GSVIVG01007203001 Vitis vinifera HOM05D006493 ORTHO05D009864 8.5e-22 108.2 59 89.8
Nn1g10151 Nelumbo nucifera HOM05D006493 ORTHO05D009864 1.4e-19 100.9 51 98.0
Nitab4.5_0008300g0050 Nicotiana tabacum HOM05D008194 ORTHO05D010811 5.1e-19 99.0 65 75.4
Glyma.01G136800 Glycine max HOM05D008194 ORTHO05D010811 6.7e-19 98.6 64 75.0
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 3.3e-18 96.3 51 94.1
Nitab4.5_0008300g0040 Nicotiana tabacum HOM05D008194 ORTHO05D010811 7.4e-18 95.1 71 67.6
Aa31csc239G70 Aethionema arabicum HOM05D008194 ORTHO05D010811 6.3e-17 92.0 48 95.8
Nitab4.5_0000055g0320 Nicotiana tabacum HOM05D008194 ORTHO05D010811 6.9e-16 88.6 69 71.0
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 1.2e-15 87.8 52 86.5
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 2.6e-15 86.7 58 77.6
SHI34940 Sapria himalayana HOM05D008194 ORTHO05D010811 3.2e-13 79.7 72 62.5
SHI39615 Sapria himalayana HOM05D008194 ORTHO05D010811 2.8e-09 66.6 48 64.6
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 1.4e-08 64.3 30 100.0
Solyc03g063510.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 2.0e-07 60.5 29 93.1
Nitab4.5_0000172g1630 Nicotiana tabacum HOM05D008194 ORTHO05D010811 6.5e-06 55.5 57 56.1


User provided reference genes

Program Settings