Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 0.0e+00 1328.9 728 100.0
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 0.0e+00 1255.4 671 99.0
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.3e-257 893.3 664 75.3
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 3.7e-257 891.7 688 73.7
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.2e-254 882.5 679 73.2
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.4e-251 873.2 681 72.2
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.3e-249 864.4 673 72.4
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 1.8e-248 862.8 682 71.7
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 4.2e-245 851.7 679 70.3
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.1e-244 849.4 672 71.9
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.1e-244 849.4 672 71.9
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 2.3e-243 845.9 671 70.9
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.5e-242 843.2 671 70.8
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.4e-240 835.9 671 70.5
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 3.3e-221 772.3 619 65.8
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.8e-220 769.2 637 66.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 7.3e-213 744.6 678 62.5
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 8.1e-212 741.1 680 60.0
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.1e-211 740.7 610 64.3
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.3e-211 739.6 673 60.9
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.6e-210 736.1 637 61.2
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 7.6e-210 734.6 677 61.3
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 6.4e-209 731.5 673 59.6
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.1e-208 730.7 674 60.5
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 3.5e-207 725.7 637 62.3
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 7.8e-207 724.5 678 60.6
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 8.6e-206 721.1 657 61.5
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.1e-205 720.7 678 60.5
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.1e-205 720.7 659 62.1
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.6e-204 716.8 672 57.9
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 4.4e-202 708.8 677 60.1
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 6.4e-201 704.9 657 61.3
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.1e-200 704.1 677 59.2
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.4e-200 703.7 677 60.0
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.6e-199 698.7 677 58.6
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 3.1e-195 686.0 682 56.0
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.1e-195 686.0 665 58.9
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 5.3e-195 685.3 664 57.2
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.2e-193 679.9 674 57.7
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 4.9e-193 678.7 667 57.6
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.3e-190 670.6 676 56.5
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 3.0e-190 669.5 566 60.8
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.1e-189 667.5 679 56.1
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 7.4e-189 664.8 668 56.6
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.6e-188 663.7 550 61.6
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 5.3e-187 658.7 617 57.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.0e-186 656.8 671 55.0
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.0e-186 656.8 680 56.9
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 4.5e-186 655.6 669 54.1
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.9e-185 652.9 680 54.1
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 6.4e-185 651.7 620 57.6
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.4e-185 651.7 620 57.6
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.4e-185 651.7 511 63.0
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.9e-184 650.2 536 60.3
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.9e-184 650.2 674 54.9
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.2e-183 647.5 670 53.9
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-183 647.5 664 54.8
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.6e-183 647.1 510 62.9
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.6e-183 647.1 510 62.9
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.1e-183 646.7 679 52.3
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 3.5e-183 646.0 672 53.4
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.3e-182 644.0 680 55.1
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.0e-182 642.9 686 54.2
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 8.7e-182 641.3 685 53.6
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.1e-181 641.0 674 54.7
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.3e-181 639.0 688 53.2
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.3e-180 637.5 671 55.4
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.6e-180 637.1 668 55.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 1.1e-179 634.4 669 52.5
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.4e-179 634.0 667 55.9
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 2.4e-179 633.3 666 54.5
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.9e-179 631.7 623 55.2
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.2e-178 630.9 671 53.5
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 3.4e-178 629.4 510 62.0
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 5.8e-178 628.6 646 54.3
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 7.6e-178 628.2 641 54.1
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 4.9e-177 625.5 670 53.3
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 4.9e-177 625.5 678 53.1
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 6.5e-177 625.2 669 56.2
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.6e-175 620.5 689 52.2
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 3.5e-175 619.4 671 53.9
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 6.0e-175 618.6 461 65.3
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 6.7e-174 615.1 680 53.7
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.1e-173 614.4 681 52.3
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.5e-173 613.2 673 54.5
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 3.3e-173 612.8 554 58.7
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.3e-171 605.5 662 50.3
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.7e-169 600.5 656 51.4
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 1.9e-168 597.0 664 50.8
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.1e-167 593.6 663 51.1
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 6.1e-167 592.0 672 53.4
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-166 590.9 488 59.8
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-166 590.5 667 53.8
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.1e-165 587.8 553 58.2
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.3e-164 584.3 652 54.8
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 2.0e-157 560.5 660 52.1
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 3.4e-154 549.7 658 49.5
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.1e-144 518.1 416 59.9
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 5.3e-139 499.2 665 49.9
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 6.5e-137 492.3 376 64.6
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.1e-128 464.9 374 61.2
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 9.8e-125 451.8 524 48.3
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.4e-115 421.4 555 42.2
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 2.3e-113 414.1 542 44.3
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 8.6e-113 412.1 556 41.4
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.1e-110 403.7 623 41.1
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.3e-108 398.3 567 41.4
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 8.1e-79 299.3 552 34.6
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 5.8e-77 293.1 683 30.0
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.8e-55 221.1 515 29.1
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.0e-45 188.3 537 26.4
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.4e-43 182.2 432 29.4
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 9.4e-27 126.3 98 61.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 9.4e-27 126.3 98 61.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 5.2e-25 120.6 98 59.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.4e-17 95.9 381 24.9


User provided reference genes

Program Settings