Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 8.8e-196 686.8 355 100.0
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-187 659.4 355 96.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 5.2e-180 634.4 355 93.5
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-158 563.1 390 80.3
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 3.4e-123 445.7 328 73.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.1e-117 426.4 328 70.1
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 4.8e-117 425.2 327 70.9
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 5.3e-116 421.8 333 69.4
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 8.5e-106 387.9 325 63.1
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 9.4e-105 384.4 379 63.6
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 3.1e-100 369.4 357 58.8
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 9.1e-100 367.9 337 59.9
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.0e-99 366.7 329 62.3
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 3.4e-99 365.9 327 64.2
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 6.5e-98 361.7 333 59.8
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 9.4e-97 357.8 329 60.8
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 9.4e-97 357.8 325 59.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.6e-96 357.1 337 57.0
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 7.9e-96 354.8 326 59.5
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.3e-95 353.2 337 58.2
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 5.1e-95 352.1 284 66.9
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.1e-94 350.9 322 59.6
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 2.2e-93 346.7 330 59.4
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.2e-93 346.7 338 58.0
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 3.7e-93 345.9 343 57.7
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 4.8e-93 345.5 332 57.8
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 8.2e-93 344.7 327 59.6
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 8.2e-93 344.7 320 60.6
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.8e-92 343.6 335 57.3
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 7.7e-91 338.2 320 56.9
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 7.7e-91 338.2 356 53.9
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.3e-90 337.4 339 55.8
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.7e-90 337.0 339 59.6
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.0e-90 335.5 321 56.7
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.5e-90 334.7 339 56.6
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.5e-89 334.0 337 57.3
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.9e-89 333.6 333 55.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 3.2e-89 332.8 321 57.9
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.2e-89 332.8 321 58.3
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.2e-89 332.4 321 57.9
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 2.1e-88 330.1 332 55.4
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.7e-88 329.7 321 57.6
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.6e-88 329.3 325 56.9
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.8e-87 327.0 337 54.3
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 3.0e-87 326.2 332 55.1
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.0e-87 326.2 354 55.6
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 5.2e-87 325.5 326 58.0
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 5.2e-87 325.5 351 54.7
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 8.8e-87 324.7 343 54.8
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.1e-86 324.3 337 53.4
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.5e-86 323.9 351 54.4
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 3.3e-86 322.8 336 55.7
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 3.3e-86 322.8 338 53.3
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 4.4e-86 322.4 327 56.3
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 4.4e-86 322.4 331 56.5
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 9.7e-86 321.2 336 53.6
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 9.7e-86 321.2 336 53.6
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 9.7e-86 321.2 333 55.3
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.3e-85 320.9 339 53.1
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-85 320.9 435 45.5
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.2e-85 320.1 338 53.8
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.2e-85 320.1 334 51.8
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 3.7e-85 319.3 324 56.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 3.7e-85 319.3 335 52.5
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.4e-84 317.4 342 52.9
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 3.1e-84 316.2 335 55.2
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 4.1e-84 315.8 338 53.3
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 9.1e-84 314.7 346 52.3
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.2e-83 314.3 335 54.6
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.2e-83 314.3 350 50.6
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 2.6e-83 313.2 332 55.7
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 2.6e-83 313.2 338 53.3
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 5.9e-83 312.0 341 52.8
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 5.9e-83 312.0 350 52.9
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 7.7e-83 311.6 345 52.5
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.9e-82 309.7 340 52.6
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.8e-82 309.3 343 53.1
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 8.5e-82 308.1 326 54.6
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.9e-81 307.0 339 54.3
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.5e-81 306.6 326 55.5
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.0e-79 301.2 321 53.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.8e-76 290.4 339 51.0
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.8e-76 290.4 321 52.3
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 7.7e-75 285.0 334 48.8
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.2e-72 277.7 334 47.3
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.0e-71 274.6 329 48.9
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 3.0e-71 273.1 342 48.8
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 9.8e-70 268.1 324 49.7
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 3.7e-69 266.2 338 50.6
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.4e-68 264.2 320 51.6
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-68 264.2 267 56.6
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 9.1e-68 261.5 275 55.6
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 4.7e-64 249.2 393 41.7
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 1.2e-62 244.6 251 54.6
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.4e-52 211.1 435 36.3
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 8.1e-48 195.3 169 62.1
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 4.0e-47 193.0 240 50.4
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.4e-44 183.7 374 33.2
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 2.1e-40 170.6 199 51.3
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 3.6e-40 169.9 218 48.6
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.4e-39 167.9 135 65.2
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 2.3e-39 167.2 349 33.8
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.2e-27 128.3 117 59.0
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 8.7e-26 122.1 131 53.4
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.9e-23 112.5 90 65.6
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 9.9e-22 108.6 188 38.3
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 4.9e-21 106.3 474 25.7
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.2e-20 103.2 76 73.7
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 3.5e-19 100.1 72 69.4
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 3.0e-18 97.1 259 31.3
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 4.8e-16 89.7 76 61.8
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.8e-15 87.8 121 45.5
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 6.4e-13 79.3 70 58.6
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 8.4e-13 79.0 173 35.3
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.7e-11 73.9 266 26.7
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.3e-10 71.6 69 55.1
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 8.7e-10 68.9 217 27.2
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.1e-09 68.6 55 60.0
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 4.3e-09 66.6 66 54.5
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.8e-07 61.2 43 65.1


User provided reference genes

Program Settings