Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L4TMU9 Arachis hypogaea HOM05D000181 ORTHO05D031513 1.2e-58 229.6 115 100.0
arahy.Tifrunner.gnm1.ann1.QV5H46 Arachis hypogaea HOM05D000181 ORTHO05D014369 4.1e-17 91.7 51 90.2
arahy.Tifrunner.gnm1.ann1.TG6BII Arachis hypogaea HOM05D000181 ORTHO05D014369 4.1e-17 91.7 51 90.2
FAN19G2441 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.4e-14 83.2 88 60.2
FAN23G1442 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.4e-14 83.2 88 60.2
FAN23G2380 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.4e-14 83.2 88 60.2
FAN26G0955 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.4e-14 83.2 88 60.2
Nitab4.5_0000174g0060 Nicotiana tabacum HOM05D000181 ORTHO05D008796 4.2e-14 81.6 87 60.9
Nitab4.5_0003622g0010 Nicotiana tabacum HOM05D000181 ORTHO05D008796 4.2e-14 81.6 87 60.9
Oeu037813.3 Olea europaea HOM05D000181 ORTHO05D008796 2.7e-13 79.0 134 44.8
arahy.Tifrunner.gnm1.ann1.4PM6YJ Arachis hypogaea HOM05D000181 ORTHO05D014369 7.9e-13 77.4 40 92.5
SalBow1G3253 Salvia bowleyana HOM05D000181 ORTHO05D008796 1.4e-12 76.6 113 46.0
Atru.chr4.922 Acer truncatum HOM05D000181 ORTHO05D008796 1.8e-12 76.3 113 46.9
Ah.03g146800 Amaranthus hybridus HOM05D000181 ORTHO05D008796 1.8e-12 76.3 113 46.9
ECA233G1045 Erigeron canadensis HOM05D000181 ORTHO05D008796 1.8e-12 76.3 44 90.9
HanXRQChr15g0493481 Helianthus annuus HOM05D000181 ORTHO05D008796 1.8e-12 76.3 44 90.9
Ciclev10000267m.g Citrus clementina HOM05D000181 ORTHO05D008796 2.3e-12 75.9 113 46.0
Migut.H00729 Erythranthe guttata HOM05D000181 ORTHO05D008796 2.3e-12 75.9 113 46.0
FvH4_1g24180 Fragaria vesca HOM05D000181 ORTHO05D008796 3.0e-12 75.5 113 46.0
RcHm_v2.0_Chr2g0120571 Rosa chinensis HOM05D000181 ORTHO05D008796 3.0e-12 75.5 113 46.0
arahy.Tifrunner.gnm1.ann1.ESH7KG Arachis hypogaea HOM05D000219 ORTHO05D008796 3.9e-12 75.1 42 92.9
Lj1g0000900 Lotus japonicus HOM05D000181 ORTHO05D008796 3.9e-12 75.1 113 46.0
Lalb_Chr08g0238431 Lupinus albus HOM05D000181 ORTHO05D008796 3.9e-12 75.1 113 46.0
Aa31LG1G17360 Aethionema arabicum HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
AL8G42000 Arabidopsis lyrata HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
AT5G64580 Arabidopsis thaliana HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
Carub.0008s2538 Capsella rubella HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
CARHR278550 Cardamine hirsuta HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
COL.COLO4_35699 Corchorus olitorius HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
Thhalv10003640m.g Eutrema salsugineum HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
Sp2g27650 Schrenkiella parvula HOM05D000181 ORTHO05D008796 6.7e-12 74.3 113 46.0
ATR1136G075 Amborella trichopoda HOM05D000181 ORTHO05D008796 8.8e-12 73.9 44 88.6
BcaB02g09796 Brassica carinata HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
BcaC01g02686 Brassica carinata HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
A06p31320 Brassica napus HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
C03p61660 Brassica napus HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
BolC3t18429H Brassica oleracea HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
BraA06t26072Z Brassica rapa HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
CAN.G46.7 Capsicum annuum HOM05D000181 ORTHO05D008796 8.8e-12 73.9 44 88.6
Cpa.g.sc382.2 Carica papaya HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
CiPaw.03G123000 Carya illinoinensis HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Cc07_g18240 Coffea canephora HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Dinv06068 Davidia involucrata HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Duzib147G0781 Durio zibethinus HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Eucgr.H04960 Eucalyptus grandis HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Gohir.A11G056700 Gossypium hirsutum HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Gohir.D11G060900 Gossypium hirsutum HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Gorai.007G065600 Gossypium raimondii HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
MD02G1315900 Malus domestica HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Manes.13G083000 Manihot esculenta HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Nn5g28591 Nelumbo nucifera HOM05D000181 ORTHO05D008796 8.8e-12 73.9 44 88.6
Peaxi162Scf00066g01518 Petunia axillaris HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Prupe.2G008800 Prunus persica HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
PGR102G1783 Punica granatum HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
QL06p029080 Quercus lobata HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Sc07g0001700 Simmondsia chinensis HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Solyc04g063360.3 Solanum lycopersicum HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
Sopen04g026280 Solanum pennellii HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
SGA_v2.0_scaffold289G47267 Striga asiatica HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 45.1
Thecc.01G129300 Theobroma cacao HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
unitig_27.g25343 Utricularia gibba HOM05D000181 ORTHO05D008796 8.8e-12 73.9 113 46.0
CDE08G1321 Ceratophyllum demersum HOM05D000181 ORTHO05D008796 1.1e-11 73.6 42 90.5
AUR62003594 Chenopodium quinoa HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
AUR62017907 Chenopodium quinoa HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
Haze_25205 Corylus avellana HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
DCAR_014343 Daucus carota HOM05D000181 ORTHO05D008796 1.1e-11 73.6 44 86.4
Glyma.04G213800 Glycine max HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
Glyma.06G152500 Glycine max HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
Sed0015491 Sechium edule HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
THA.LOC104799548 Tarenaya hassleriana HOM05D000181 ORTHO05D008796 1.1e-11 73.6 113 45.1
TWI75G0221 Tripterygium wilfordii HOM05D000181 ORTHO05D008796 1.1e-11 73.6 44 86.4
ClCG01G015450 Citrullus lanatus HOM05D000181 ORTHO05D008796 2.0e-11 72.8 113 45.1
MELO3C008051.2 Cucumis melo HOM05D000181 ORTHO05D008796 2.0e-11 72.8 113 45.1
CsaV3_6G041690 Cucumis sativus L. HOM05D000181 ORTHO05D008796 2.0e-11 72.8 113 45.1
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.0e-11 72.8 113 45.1
CSS0046503 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D008796 2.5e-11 72.4 113 45.1
Lsat_1_v5_gn_4_137601 Lactuca sativa HOM05D000181 ORTHO05D008796 2.5e-11 72.4 44 86.4
PSO017G6538 Papaver somniferum HOM05D000181 ORTHO05D008796 2.5e-11 72.4 113 45.1
PSO170G5995 Papaver somniferum HOM05D000181 ORTHO05D008796 2.5e-11 72.4 113 45.1
Phvul.009G149600 Phaseolus vulgaris HOM05D000181 ORTHO05D008796 2.5e-11 72.4 113 44.2
TAR625G0260 Trochodendron aralioides HOM05D000181 ORTHO05D008796 2.5e-11 72.4 113 45.1
VMungo1309G1858 Vigna mungo HOM05D000181 ORTHO05D008796 2.5e-11 72.4 113 44.2
EL10Ac6g15283 Beta vulgaris HOM05D000181 ORTHO05D008796 4.3e-11 71.6 44 86.4
Potri.005G059700 Populus trichocarpa HOM05D000181 ORTHO05D008796 4.3e-11 71.6 112 44.6
Sabra05G0050600 Salix brachista HOM05D000181 ORTHO05D008796 4.3e-11 71.6 112 44.6
Actinidia20086 Actinidia chinensis HOM05D000181 ORTHO05D008796 5.7e-11 71.2 121 42.1
Aqoxy5G02248 Aquilegia oxysepala HOM05D000181 ORTHO05D008796 5.7e-11 71.2 44 84.1
MBI03_g00431_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D008796 5.7e-11 71.2 113 44.2
Ca_16934_v3 Cicer arietinum L. HOM05D000181 ORTHO05D008796 9.7e-11 70.5 113 44.2
Lj4C847G8 Lonicera japonica HOM05D000181 ORTHO05D008796 9.7e-11 70.5 47 74.5
TPR.G34653 Trifolium pratense HOM05D000181 ORTHO05D008796 9.7e-11 70.5 113 44.2
Psat5g060120 Pisum sativum HOM05D000181 ORTHO05D008796 2.2e-10 69.3 113 43.4
Hund04481 Selenicereus undatus HOM05D000181 ORTHO05D008796 2.2e-10 69.3 113 42.5
CiPaw.03G123200 Carya illinoinensis HOM05D000181 ORTHO05D008796 2.8e-10 68.9 113 44.2
Medtr3g096000 Medicago truncatula HOM05D000181 ORTHO05D008796 2.8e-10 68.9 113 43.4
HPP92_009285 Vanilla planifolia HOM05D000181 ORTHO05D008796 3.7e-10 68.6 43 81.4
Prupe.1G190200 Prunus persica HOM05D000181 ORTHO05D008796 8.2e-10 67.4 42 85.7
MBI14_g41408_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D031513 1.1e-09 67.0 43 79.1
MBI14_g45317_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D031513 1.1e-09 67.0 43 79.1
Pp3c4_8640 Physcomitrium patens HOM05D000181 ORTHO05D008796 1.5e-08 63.2 44 70.5
AagrBONN_evm.TU.Sc2ySwM_362.1257 Anthoceros agrestis HOM05D000181 ORTHO05D008796 2.6e-08 62.4 42 73.8
SEGI_17156 Sequoiadendron giganteum HOM05D000181 ORTHO05D008796 4.5e-08 61.6 42 69.0
SMO358G0281 Selaginella moellendorffii HOM05D000181 ORTHO05D008796 5.9e-08 61.2 47 72.3
Mapoly0081s0059 Marchantia polymorpha HOM05D000181 ORTHO05D008796 7.7e-08 60.8 42 69.0
arahy.Tifrunner.gnm1.ann1.WQVL4T Arachis hypogaea HOM05D000181 ORTHO05D014369 1.0e-07 60.5 30 96.7


User provided reference genes

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