Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.7e-111 404.1 210 100.0
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 1.5e-62 243.4 217 66.4
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 8.7e-58 227.6 214 62.6
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.6e-56 223.4 224 60.7
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.1e-56 223.0 212 61.8
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 8.1e-56 221.1 212 60.8
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.2e-54 217.2 212 59.4
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.5e-54 216.9 212 60.4
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.5e-54 216.9 212 60.4
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.7e-53 213.4 212 57.5
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.1e-49 200.7 215 54.4
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.5e-49 200.3 212 55.7
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.3e-48 197.2 210 55.2
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.1e-47 194.1 180 63.9
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 7.6e-46 188.0 212 54.2
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.7e-45 186.8 212 52.8
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 6.4e-45 184.9 212 52.8
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 7.1e-44 181.4 198 53.5
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 4.6e-43 178.7 210 51.0
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 6.0e-43 178.3 212 50.5
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.3e-42 177.2 208 51.4
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.3e-42 177.2 208 51.4
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.8e-42 176.8 208 51.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.8e-42 176.8 233 48.1
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 3.0e-42 176.0 212 50.5
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 3.0e-42 176.0 210 50.5
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 5.1e-42 175.3 196 52.0
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.9e-41 173.3 212 49.5
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 7.4e-41 171.4 204 49.5
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 1.6e-40 170.2 212 48.1
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.6e-40 170.2 198 49.5
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.1e-40 169.9 212 49.1
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 2.8e-40 169.5 212 49.5
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.8e-39 166.8 202 51.0
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.8e-39 166.8 210 47.6
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.8e-39 166.8 206 51.0
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.4e-39 166.4 210 48.1
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 2.4e-39 166.4 212 47.6
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 2.4e-39 166.4 212 48.1
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 3.1e-39 166.0 212 48.1
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 5.3e-39 165.2 96 83.3
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.3e-39 165.2 210 48.6
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 9.0e-39 164.5 228 46.9
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.5e-38 163.7 210 46.7
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.6e-38 162.9 224 46.0
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 7.6e-38 161.4 211 46.4
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 1.7e-37 160.2 212 49.1
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.7e-37 160.2 205 47.8
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 1.7e-37 160.2 212 46.7
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.2e-37 159.8 212 45.3
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.9e-37 159.5 257 43.2
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 3.8e-37 159.1 206 49.5
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.1e-36 157.5 246 43.5
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.4e-36 157.1 208 46.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.9e-36 156.8 198 49.5
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 5.5e-36 155.2 210 47.1
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 2.1e-35 153.3 207 46.9
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 3.5e-35 152.5 185 49.2
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.3e-34 149.8 210 42.9
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 2.3e-34 149.8 207 45.9
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 3.9e-34 149.1 213 43.7
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 5.1e-34 148.7 209 42.6
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.1e-33 147.5 119 68.1
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 5.7e-33 145.2 212 43.9
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.3e-32 144.1 168 51.8
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.1e-32 143.3 177 46.9
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 6.2e-32 141.7 208 42.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 4.1e-31 139.0 230 40.4
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 4.1e-31 139.0 206 41.7
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 8.4e-29 131.3 165 48.5
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 7.1e-28 128.3 76 82.9
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 4.6e-27 125.6 164 49.4
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 6.1e-27 125.2 113 59.3
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 1.1e-25 120.9 97 66.0
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.5e-25 120.6 207 35.7
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 1.1e-23 114.4 99 62.6
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.4e-23 113.2 119 58.0
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.7e-21 107.1 117 56.4
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.4e-20 104.0 212 31.6
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.9e-20 103.6 212 30.7
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 4.2e-20 102.4 110 50.9
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 3.6e-19 99.4 183 33.9
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 1.0e-13 81.3 74 56.8
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 2.9e-13 79.7 80 52.5
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 1.6e-11 73.9 45 77.8
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 4.7e-11 72.4 210 33.3
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 1.8e-10 70.5 53 73.6
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 3.0e-10 69.7 56 66.1
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 6.3e-08 62.0 78 44.9
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 9.1e-07 58.2 176 23.9
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 2.6e-06 56.6 171 25.7
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 7.7e-06 55.1 35 80.0


User provided reference genes

Program Settings