Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 1.3e-44 182.6 87 100.0
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.9e-27 125.6 78 74.4
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 9.5e-27 123.2 78 76.9
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.2e-26 122.9 75 74.7
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 2.8e-26 121.7 73 74.0
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 3.6e-26 121.3 75 76.0
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 4.7e-26 120.9 75 74.7
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 4.7e-26 120.9 70 75.7
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 1.1e-25 119.8 67 79.1
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 1.4e-25 119.4 72 76.4
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 1.4e-25 119.4 75 74.7
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 1.4e-25 119.4 83 69.9
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 1.4e-25 119.4 70 74.3
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.4e-25 119.4 78 74.4
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 2.3e-25 118.6 64 81.2
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 2.3e-25 118.6 83 68.7
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 3.1e-25 118.2 67 76.1
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 3.1e-25 118.2 72 77.8
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.1e-25 118.2 73 72.6
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 4.0e-25 117.9 70 74.3
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 4.0e-25 117.9 70 74.3
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 5.2e-25 117.5 73 72.6
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 5.2e-25 117.5 73 74.0
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 6.8e-25 117.1 73 72.6
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 8.9e-25 116.7 64 79.7
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 8.9e-25 116.7 75 72.0
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 8.9e-25 116.7 77 70.1
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 8.9e-25 116.7 77 70.1
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.2e-24 116.3 73 69.9
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 1.2e-24 116.3 74 67.6
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.2e-24 116.3 66 78.8
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 2.0e-24 115.5 75 69.3
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 2.6e-24 115.2 70 71.4
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 2.6e-24 115.2 71 70.4
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 2.6e-24 115.2 75 70.7
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 5.8e-24 114.0 66 74.2
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 7.5e-24 113.6 82 64.6
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 7.5e-24 113.6 72 69.4
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 7.5e-24 113.6 63 76.2
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 9.9e-24 113.2 84 65.5
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.3e-23 112.8 74 68.9
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 1.3e-23 112.8 74 70.3
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 2.2e-23 112.1 77 67.5
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 2.2e-23 112.1 77 67.5
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 2.2e-23 112.1 77 67.5
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 2.9e-23 111.7 72 70.8
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 4.9e-23 110.9 75 66.7
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 4.9e-23 110.9 71 67.6
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 4.9e-23 110.9 64 75.0
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.1e-22 109.8 73 65.8
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 1.1e-22 109.8 64 71.9
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 1.1e-22 109.8 64 71.9
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.1e-22 109.8 64 75.0
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.4e-22 109.4 72 66.7
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.4e-22 109.4 72 66.7
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.9e-22 109.0 81 63.0
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 1.9e-22 109.0 66 69.7
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 2.4e-22 108.6 73 69.9
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 2.4e-22 108.6 78 62.8
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 3.2e-22 108.2 74 68.9
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 5.4e-22 107.5 71 66.2
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 5.4e-22 107.5 71 66.2
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 7.1e-22 107.1 71 66.2
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 7.1e-22 107.1 72 65.3
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 9.2e-22 106.7 73 65.8
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.2e-21 106.3 67 67.2
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.6e-21 105.9 67 70.1
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 1.6e-21 105.9 71 64.8
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 2.1e-21 105.5 71 64.8
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 2.1e-21 105.5 71 64.8
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 3.5e-21 104.8 71 63.4
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 6.0e-21 104.0 71 66.2
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 6.0e-21 104.0 72 62.5
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 7.8e-21 103.6 68 66.2
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.0e-20 103.2 73 65.8
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 1.0e-20 103.2 71 62.0
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.3e-20 102.8 71 66.2
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 1.3e-20 102.8 71 64.8
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.3e-20 102.8 71 66.2
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 2.3e-20 102.1 71 64.8
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 2.3e-20 102.1 78 60.3
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 3.0e-20 101.7 64 73.4
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 6.6e-20 100.5 55 78.2
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 6.6e-20 100.5 55 78.2
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 8.6e-20 100.1 112 49.1
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 1.1e-19 99.8 71 63.4
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.3e-19 97.8 72 61.1
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 4.3e-19 97.8 73 60.3
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 9.5e-19 96.7 77 58.4
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 2.1e-18 95.5 73 58.9
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 8.1e-18 93.6 96 53.1
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 3.1e-17 91.7 92 48.9
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 5.2e-17 90.9 58 69.0
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 6.8e-17 90.5 57 63.2
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 2.6e-16 88.6 50 74.0
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 3.4e-16 88.2 45 77.8
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 2.9e-15 85.1 54 64.8
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 4.9e-15 84.3 72 54.2
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.4e-14 82.8 77 53.2
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 7.1e-14 80.5 65 56.9
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 7.1e-14 80.5 65 56.9
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 1.2e-13 79.7 48 72.9
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 2.3e-12 75.5 54 63.0
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.3e-12 75.5 73 49.3
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.5e-11 72.8 42 71.4
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.8e-09 65.9 53 56.6
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 9.9e-08 60.1 53 47.2
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 1.3e-07 59.7 42 52.4
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 1.1e-06 56.6 28 78.6
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 2.4e-06 55.5 28 78.6


User provided reference genes

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