Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.KX11UN Arachis hypogaea HOM05D000188 ORTHO05D085041 2.8e-85 318.5 158 100.0
arahy.Tifrunner.gnm1.ann1.5SJ4SU Arachis hypogaea HOM05D000188 ORTHO05D005675 4.1e-28 128.6 69 92.8
arahy.Tifrunner.gnm1.ann1.IL79Z4 Arachis hypogaea HOM05D000188 ORTHO05D005675 4.1e-28 128.6 69 92.8
arahy.Tifrunner.gnm1.ann1.BEB4AA Arachis hypogaea HOM05D000188 ORTHO05D005675 1.5e-25 120.2 69 89.9
arahy.Tifrunner.gnm1.ann1.NPS6SW Arachis hypogaea HOM05D000188 ORTHO05D083179 4.1e-20 102.1 70 74.3
Glyma.07G037400 Glycine max HOM05D000188 ORTHO05D005675 6.0e-19 98.2 71 71.8
VMungo0331G0331 Vigna mungo HOM05D000188 ORTHO05D005675 1.7e-18 96.7 69 72.5
Phvul.010G130800 Phaseolus vulgaris HOM05D000188 ORTHO05D005675 2.5e-17 92.8 69 69.6
Lj3g0012997 Lotus japonicus HOM05D000188 ORTHO05D005675 3.3e-17 92.4 68 69.1
Glyma.16G006800 Glycine max HOM05D000188 ORTHO05D005675 5.6e-17 91.7 71 67.6
TPR.G32505 Trifolium pratense HOM05D000188 ORTHO05D005675 7.3e-17 91.3 68 69.1
Psat4g183080 Pisum sativum HOM05D000188 ORTHO05D005675 8.1e-16 87.8 66 69.7
Medtr8g020390 Medicago truncatula HOM05D000188 ORTHO05D005675 1.8e-15 86.7 68 66.2
Ca_23369_v3 Cicer arietinum L. HOM05D000188 ORTHO05D005675 2.3e-15 86.3 68 67.6
Lalb_Chr25g0281191 Lupinus albus HOM05D000188 ORTHO05D005675 1.3e-13 80.5 69 66.7
Cfa015917 Carpinus fangiana HOM05D000188 ORTHO05D005675 2.7e-11 72.8 69 60.9
COL.COLO4_16446 Corchorus olitorius HOM05D000188 ORTHO05D005675 7.8e-11 71.2 69 58.0
TAR376G1048 Trochodendron aralioides HOM05D000188 ORTHO05D005675 1.0e-10 70.9 69 58.0
CANSAT25G0411 Cannabis sativa HOM05D000188 ORTHO05D005675 1.3e-10 70.5 68 58.8
CSS0013381 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D005675 2.3e-10 69.7 69 59.4
CSS0018464 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D005675 2.3e-10 69.7 69 59.4
Gohir.A05G228600 Gossypium hirsutum HOM05D000188 ORTHO05D005675 3.0e-10 69.3 69 58.0
CiPaw.06G021100 Carya illinoinensis HOM05D000188 ORTHO05D005675 3.9e-10 68.9 70 61.4
Haze_00578 Corylus avellana HOM05D000188 ORTHO05D005675 3.9e-10 68.9 69 59.4
Duzib116G0930 Durio zibethinus HOM05D000188 ORTHO05D005675 8.6e-10 67.8 69 55.1
Potri.002G093500 Populus trichocarpa HOM05D000188 ORTHO05D005675 8.6e-10 67.8 69 56.5
Gohir.D05G231000 Gossypium hirsutum HOM05D000188 ORTHO05D005675 1.1e-09 67.4 69 56.5
Gorai.009G239200 Gossypium raimondii HOM05D000188 ORTHO05D005675 1.1e-09 67.4 69 56.5
GSVIVG01009001001 Vitis vinifera HOM05D000188 ORTHO05D005675 1.9e-09 66.6 69 56.5
AUR62018362 Chenopodium quinoa HOM05D000188 ORTHO05D005675 3.3e-09 65.9 69 55.1
AUR62030301 Chenopodium quinoa HOM05D000188 ORTHO05D005675 3.3e-09 65.9 69 55.1
Ciclev10030523m.g Citrus clementina HOM05D000188 ORTHO05D005675 3.3e-09 65.9 69 53.6
Migut.O00753 Erythranthe guttata HOM05D000188 ORTHO05D005675 3.3e-09 65.9 110 40.0
Nn5g29054 Nelumbo nucifera HOM05D000188 ORTHO05D005675 3.3e-09 65.9 69 55.1
Nn1g05298 Nelumbo nucifera HOM05D000188 ORTHO05D005675 4.3e-09 65.5 69 53.6
CiPaw.06G021000 Carya illinoinensis HOM05D000188 ORTHO05D005675 5.6e-09 65.1 70 58.6
vmacro04758 Vaccinium macrocarpon HOM05D000188 ORTHO05D005675 5.6e-09 65.1 69 56.5
QL12p036114 Quercus lobata HOM05D000188 ORTHO05D005675 7.3e-09 64.7 69 55.1
MELO3C010422.2 Cucumis melo HOM05D000188 ORTHO05D005675 9.5e-09 64.3 76 50.0
Potri.005G168300 Populus trichocarpa HOM05D000188 ORTHO05D005675 9.5e-09 64.3 69 53.6
CsaV3_4G028690 Cucumis sativus L. HOM05D000188 ORTHO05D005675 1.2e-08 63.9 76 50.0
Manes.12G040200 Manihot esculenta HOM05D000188 ORTHO05D005675 1.2e-08 63.9 69 55.1
Gohir.A05G267700 Gossypium hirsutum HOM05D000188 ORTHO05D005675 2.1e-08 63.2 90 46.7
Rhsim08G0249100 Rhododendron simsii HOM05D000188 ORTHO05D005675 2.8e-08 62.8 75 53.3
Duzib093G0224 Durio zibethinus HOM05D000188 ORTHO05D005675 3.6e-08 62.4 80 50.0
MD08G1179700 Malus domestica HOM05D000188 ORTHO05D005675 3.6e-08 62.4 68 54.4
Thecc.08G110700 Theobroma cacao HOM05D000188 ORTHO05D005675 3.6e-08 62.4 69 55.1
Aqoxy6G00581 Aquilegia oxysepala HOM05D000188 ORTHO05D005675 4.7e-08 62.0 67 53.7
arahy.Tifrunner.gnm1.ann1.1J7JSX Arachis hypogaea HOM05D000188 ORTHO05D084010 4.7e-08 62.0 39 74.4
ClCG11G015400 Citrullus lanatus HOM05D000188 ORTHO05D005675 4.7e-08 62.0 76 50.0
Sed0019055 Sechium edule HOM05D000188 ORTHO05D005675 4.7e-08 62.0 69 55.1
Gohir.D05G269500 Gossypium hirsutum HOM05D000188 ORTHO05D005675 6.2e-08 61.6 90 45.6
Sed0015371 Sechium edule HOM05D000188 ORTHO05D005675 6.2e-08 61.6 76 50.0
Cpa.g.sc66.83 Carica papaya HOM05D000188 ORTHO05D005675 8.1e-08 61.2 69 53.6
Sabra05G0126300 Salix brachista HOM05D000188 ORTHO05D005675 1.1e-07 60.8 68 52.9
Sabra02G0073800 Salix brachista HOM05D000188 ORTHO05D005675 1.4e-07 60.5 68 52.9
Dinv13036 Davidia involucrata HOM05D001180 ORTHO05D005675 1.8e-07 60.1 67 53.7
Migut.C00228 Erythranthe guttata HOM05D000188 ORTHO05D005675 1.8e-07 60.1 110 38.2
Gorai.009G282100 Gossypium raimondii HOM05D000188 ORTHO05D005675 1.8e-07 60.1 90 44.4
Sp7g27950 Schrenkiella parvula HOM05D000188 ORTHO05D005675 1.8e-07 60.1 69 52.2
TAR381G0054 Trochodendron aralioides HOM05D000188 ORTHO05D005675 3.1e-07 59.3 76 50.0
Atru.chr13.1255 Acer truncatum HOM05D000188 ORTHO05D005675 5.2e-07 58.5 69 50.7
Prupe.1G513000 Prunus persica HOM05D000188 ORTHO05D005675 5.2e-07 58.5 68 52.9
AT4G30100 Arabidopsis thaliana HOM05D000188 ORTHO05D005675 6.8e-07 58.2 69 49.3
BcaNung00518 Brassica carinata HOM05D000188 ORTHO05D005675 6.8e-07 58.2 68 51.5
Carub.0007s1050 Capsella rubella HOM05D000188 ORTHO05D005675 6.8e-07 58.2 69 52.2
Thhalv10024227m.g Eutrema salsugineum HOM05D000188 ORTHO05D005675 6.8e-07 58.2 69 50.7
EL10Ac4g08219 Beta vulgaris HOM05D000188 ORTHO05D005675 8.9e-07 57.8 69 50.7
Oeu061481.1 Olea europaea HOM05D000188 ORTHO05D005675 8.9e-07 57.8 72 47.2
FAN08G1634 Fragaria x ananassa HOM05D000188 ORTHO05D005675 1.2e-06 57.4 68 50.0
Dinv07790 Davidia involucrata HOM05D000188 ORTHO05D005675 1.5e-06 57.0 67 53.7
FAN13G2300 Fragaria x ananassa HOM05D000188 ORTHO05D005675 1.5e-06 57.0 68 48.5
Peaxi162Scf00041g00212 Petunia axillaris HOM05D000188 ORTHO05D005675 1.5e-06 57.0 137 34.3
HPP92_006003 Vanilla planifolia HOM05D000188 ORTHO05D005675 1.5e-06 57.0 71 46.5
FAN04G2787 Fragaria x ananassa HOM05D000188 ORTHO05D005675 2.0e-06 56.6 68 50.0
Manes.03G203500 Manihot esculenta HOM05D000188 ORTHO05D005675 2.0e-06 56.6 49 55.1
Ah.08g212920 Amaranthus hybridus HOM05D000188 ORTHO05D005675 2.6e-06 56.2 92 42.4
CARHR238010 Cardamine hirsuta HOM05D000188 ORTHO05D005675 2.6e-06 56.2 69 49.3
MBI05_g34465_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D005675 2.6e-06 56.2 69 46.4
MD15G1364900 Malus domestica HOM05D000188 ORTHO05D005675 3.4e-06 55.8 68 52.9
A03p59450 Brassica napus HOM05D000188 ORTHO05D005675 4.4e-06 55.5 66 51.5
C07p57500 Brassica napus HOM05D000188 ORTHO05D005675 4.4e-06 55.5 66 51.5
BolC7t46217H Brassica oleracea HOM05D000188 ORTHO05D005675 4.4e-06 55.5 66 51.5
BraA03t15001Z Brassica rapa HOM05D000188 ORTHO05D005675 4.4e-06 55.5 66 51.5
Actinidia30754 Actinidia chinensis HOM05D000188 ORTHO05D005675 5.8e-06 55.1 69 53.6


User provided reference genes

Program Settings