Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.KLBW9T Arachis hypogaea HOM05D005015 ORTHO05D005696 7.7e-46 186.8 95 100.0
HanXRQChr04g0099301 Helianthus annuus HOM05D005015 ORTHO05D005696 8.0e-19 97.1 110 54.5
SabraPtG0000800 Salix brachista HOM05D000743 ORTHO05D000580 1.4e-18 96.3 82 64.6
Lalb_Chr03g0042651 Lupinus albus HOM05D005015 ORTHO05D005696 2.0e-17 92.4 74 68.9
CAN.G612.5 Capsicum annuum HOM05D005015 ORTHO05D005696 2.2e-16 89.0 90 56.7
Peaxi162Scf00027g00003 Petunia axillaris HOM05D005015 ORTHO05D005696 2.8e-16 88.6 82 59.8
Peaxi162Scf00211g00235 Petunia axillaris HOM05D000743 ORTHO05D005696 2.8e-16 88.6 82 59.8
Peaxi162Scf00379g00087 Petunia axillaris HOM05D005015 ORTHO05D005696 2.8e-16 88.6 82 59.8
Sed0007367 Sechium edule HOM05D005015 ORTHO05D005696 2.4e-15 85.5 75 65.3
Sed0025514 Sechium edule HOM05D005015 ORTHO05D005696 2.4e-15 85.5 75 65.3
BNapus_Darmor_BZH_scaffold_253p00020 Brassica napus HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BolSC29t60569H Brassica oleracea HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BolSC37t60772H Brassica oleracea HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BolSC45t60880H Brassica oleracea HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BolSC46t60983H Brassica oleracea HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BolSC49t61201H Brassica oleracea HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BraSC140t45592Z Brassica rapa HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BraSC140t45595Z Brassica rapa HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BraSC143t45677Z Brassica rapa HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
BraSC179t45790Z Brassica rapa HOM05D005015 ORTHO05D005696 1.6e-14 82.8 75 62.7
CSS0020927 Camellia sinensis var. sinensis HOM05D005015 ORTHO05D005696 2.0e-14 82.4 76 61.8
Aa31csc39G190 Aethionema arabicum HOM05D005015 ORTHO05D005696 5.9e-14 80.9 75 62.7
LjContig00318g0021444 Lotus japonicus HOM05D005015 ORTHO05D005696 1.0e-13 80.1 70 64.3
Solyc07g021380.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.3e-13 79.7 59 69.5
BolSC45t60933H Brassica oleracea HOM05D005015 ORTHO05D005696 2.3e-13 79.0 76 60.5
Hma1.2p1_2181F.1_g316260 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 2.3e-13 79.0 82 58.5
Hma1.2p1_2181F.1_g316275 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 2.3e-13 79.0 82 58.5
LjContig00489g0021854 Lotus japonicus HOM05D005015 ORTHO05D005696 2.9e-13 78.6 75 61.3
Solyc02g012020.3 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.9e-12 75.9 90 48.9
RcHm_v2.0_CPg0502451 Rosa chinensis HOM05D005015 ORTHO05D005696 4.2e-12 74.7 76 60.5
DCAR_032470 Daucus carota HOM05D005015 ORTHO05D005696 5.5e-12 74.3 71 60.6
Potri.013G137900 Populus trichocarpa HOM05D005015 ORTHO05D005696 7.2e-12 73.9 71 60.6
CARHR281880 Cardamine hirsuta HOM05D005015 ORTHO05D005696 1.2e-11 73.2 71 59.2
Lalb_Chr08g0232621 Lupinus albus HOM05D005015 ORTHO05D005696 2.8e-11 72.0 63 65.1
PGR111G0021 Punica granatum HOM05D005015 ORTHO05D005696 2.8e-11 72.0 71 59.2
ATCG00130 Arabidopsis thaliana HOM05D005015 ORTHO05D005696 1.4e-10 69.7 71 56.3
arahy.Tifrunner.gnm1.ann1.6U43FV Arachis hypogaea HOM05D005015 ORTHO05D005696 4.0e-10 68.2 42 85.7
CAN.G877.4 Capsicum annuum HOM05D005015 ORTHO05D005696 4.0e-10 68.2 77 51.9
Lsat_1_v5_gn_3_117960 Lactuca sativa HOM05D005015 ORTHO05D005696 4.0e-10 68.2 43 81.4
Solyc00g500322.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 5.2e-10 67.8 75 53.3
Gorai.011G231900 Gossypium raimondii HOM05D005015 ORTHO05D005696 6.8e-10 67.4 48 72.9
CsaV3_UNG207830 Cucumis sativus L. HOM05D000216 ORTHO05D003638 1.5e-09 66.2 46 76.1
Lsat_1_v5_gn_1_38680 Lactuca sativa HOM05D005015 ORTHO05D005696 1.5e-09 66.2 43 79.1
Cpa.g.sc30.79 Carica papaya HOM05D005015 ORTHO05D005696 2.0e-09 65.9 66 56.1
Hund10285 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-09 65.9 81 49.4
Hund30552 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-09 65.9 81 49.4
Hund30554 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-09 65.9 81 49.4
Hund03959 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund19316 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27454 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27640 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27652 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27672 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27697 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27742 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27807 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27824 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27931 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27946 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund27994 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28016 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28060 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28129 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28142 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28151 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28161 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28177 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28187 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28210 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28258 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28390 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28502 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28650 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund28906 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund29887 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund30205 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund30312 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund30436 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund30665 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
Hund31017 Selenicereus undatus HOM05D005015 ORTHO05D005696 3.4e-09 65.1 74 54.1
HanXRQChr00c0313g0573431 Helianthus annuus HOM05D000743 ORTHO05D000580 4.4e-09 64.7 42 76.2
HanXRQChr04g0120711 Helianthus annuus HOM05D000743 ORTHO05D000580 4.4e-09 64.7 42 76.2
HanXRQChr08g0210221 Helianthus annuus HOM05D000743 ORTHO05D000580 4.4e-09 64.7 42 76.2
HanXRQChr11g0326651 Helianthus annuus HOM05D000743 ORTHO05D000580 4.4e-09 64.7 42 76.2
HanXRQCPg0579841 Helianthus annuus HOM05D000743 ORTHO05D000580 4.4e-09 64.7 42 76.2
Medtr0002s0540 Medicago truncatula HOM05D005015 ORTHO05D005696 4.4e-09 64.7 46 69.6
MELO3C000827.2 Cucumis melo HOM05D005015 ORTHO05D005696 7.5e-09 63.9 61 60.7
MELO3C027845.2 Cucumis melo HOM05D005015 ORTHO05D005696 7.5e-09 63.9 61 60.7
Lj2C1239T52 Lonicera japonica HOM05D005015 ORTHO05D005696 1.7e-08 62.8 66 53.0
Ah.10g027630 Amaranthus hybridus HOM05D005015 ORTHO05D005696 2.2e-08 62.4 66 54.5
Ah.10g027770 Amaranthus hybridus HOM05D005015 ORTHO05D005696 2.2e-08 62.4 66 54.5
Psat0s1586g0080 Pisum sativum HOM05D000743 ORTHO05D000580 2.2e-08 62.4 39 82.1
EL10As12g24014 Beta vulgaris HOM05D000743 ORTHO05D000580 2.8e-08 62.0 66 53.0
Gorai.003G134800 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.8e-08 62.0 65 55.4
HanXRQChr10g0282491 Helianthus annuus HOM05D000743 ORTHO05D000580 4.9e-08 61.2 43 72.1
Glyma.12G231900 Glycine max HOM05D005015 ORTHO05D005696 1.1e-07 60.1 55 63.6
TWI34G0268 Tripterygium wilfordii HOM05D005015 ORTHO05D005696 1.1e-07 60.1 63 54.0
BolSC29t60447H Brassica oleracea HOM05D005015 ORTHO05D005696 1.4e-07 59.7 39 76.9
Psat0s2754g0200 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-07 59.7 55 63.6
Psat1g003840 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-07 59.7 55 63.6
Psat6g219360 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-07 59.7 55 63.6
BraSC140t45611Z Brassica rapa HOM05D005015 ORTHO05D005696 1.8e-07 59.3 43 72.1
arahy.Tifrunner.gnm1.ann1.VXR7WZ Arachis hypogaea HOM05D005015 ORTHO05D005696 3.1e-07 58.5 38 84.2
Medtr1g109420 Medicago truncatula HOM05D005015 ORTHO05D005696 4.1e-07 58.2 71 50.7
Gohir.A11G101400 Gossypium hirsutum HOM05D005015 ORTHO05D005696 5.4e-07 57.8 63 52.4
Eucgr.H02991 Eucalyptus grandis HOM05D005015 ORTHO05D005696 9.2e-07 57.0 81 46.9
Migut.D01410 Erythranthe guttata HOM05D005015 ORTHO05D005696 1.2e-06 56.6 75 48.0
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-06 56.2 38 76.3
Nitab4.5_0027992g0020 Nicotiana tabacum HOM05D005015 ORTHO05D005696 3.5e-06 55.1 70 51.4
Gorai.010G147200 Gossypium raimondii HOM05D005015 ORTHO05D005696 4.5e-06 54.7 61 50.8


User provided reference genes

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