Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.KL2II8 Arachis hypogaea HOM05D005287 ORTHO05D006893 3.3e-30 134.4 69 100.0
arahy.Tifrunner.gnm1.ann1.DD86YU Arachis hypogaea HOM05D005287 ORTHO05D006893 2.8e-29 131.3 69 97.1
arahy.Tifrunner.gnm1.ann1.XEFQ2J Arachis hypogaea HOM05D005287 ORTHO05D006893 1.1e-28 129.4 69 95.7
arahy.Tifrunner.gnm1.ann1.NBNI0E Arachis hypogaea HOM05D005287 ORTHO05D006893 2.2e-26 121.7 74 87.8
arahy.Tifrunner.gnm1.ann1.JQA4UT Arachis hypogaea HOM05D005287 ORTHO05D006893 4.1e-25 117.5 74 85.1
arahy.Tifrunner.gnm1.ann1.C25YBK Arachis hypogaea HOM05D005287 ORTHO05D006893 9.2e-25 116.3 74 83.8
arahy.Tifrunner.gnm1.ann1.SZH9K7 Arachis hypogaea HOM05D005287 ORTHO05D006893 9.2e-25 116.3 74 83.8
arahy.Tifrunner.gnm1.ann1.J60LCZ Arachis hypogaea HOM05D005287 ORTHO05D006893 1.6e-24 115.5 74 83.8
arahy.Tifrunner.gnm1.ann1.V5M9Y5 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.5e-22 109.0 74 79.7
arahy.Tifrunner.gnm1.ann1.4R3XMY Arachis hypogaea HOM05D005287 ORTHO05D006893 7.3e-22 106.7 74 79.7
arahy.Tifrunner.gnm1.ann1.HZQS8U Arachis hypogaea HOM05D005287 ORTHO05D006893 5.4e-17 90.5 74 73.0
Medtr1g095880 Medicago truncatula HOM05D005287 ORTHO05D006893 8.7e-15 83.2 67 65.7
arahy.Tifrunner.gnm1.ann1.TR9913 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.9e-14 82.0 57 73.7
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 4.3e-14 80.9 68 61.8
Ca_10593_v3 Cicer arietinum L. HOM05D005287 ORTHO05D006893 5.6e-14 80.5 68 61.8
arahy.Tifrunner.gnm1.ann1.HUR7E9 Arachis hypogaea HOM05D005287 ORTHO05D006893 9.6e-14 79.7 69 63.8
Lj5g0006814 Lotus japonicus HOM05D005287 ORTHO05D006893 9.6e-14 79.7 69 63.8
arahy.Tifrunner.gnm1.ann1.EI05U6 Arachis hypogaea HOM05D005287 ORTHO05D006893 2.8e-13 78.2 41 90.2
Phvul.007G091900 Phaseolus vulgaris HOM05D005287 ORTHO05D006893 2.8e-13 78.2 69 63.8
Lalb_Chr06g0171161 Lupinus albus HOM05D005287 ORTHO05D006893 4.8e-13 77.4 64 64.1
VMungo0720G1141 Vigna mungo HOM05D005287 ORTHO05D006893 6.2e-13 77.0 67 59.7
Glyma.10G213600 Glycine max HOM05D005287 ORTHO05D006893 1.4e-12 75.9 67 64.2
Manes.10G042800 Manihot esculenta HOM05D005287 ORTHO05D006893 7.1e-09 63.5 69 50.7
Sc06g0001790 Simmondsia chinensis HOM05D005287 ORTHO05D006893 9.3e-09 63.2 64 51.6
Cfa001592 Carpinus fangiana HOM05D005287 ORTHO05D006893 2.7e-08 61.6 54 55.6
Cfa001595 Carpinus fangiana HOM05D005287 ORTHO05D006893 2.7e-08 61.6 54 55.6
Atru.chr12.633 Acer truncatum HOM05D005287 ORTHO05D006893 3.5e-08 61.2 70 42.9
Potri.010G217600 Populus trichocarpa HOM05D005287 ORTHO05D006893 4.6e-08 60.8 58 58.6
ClCG02G013900 Citrullus lanatus HOM05D005287 ORTHO05D006893 6.0e-08 60.5 72 47.2
Duzib114G0447 Durio zibethinus HOM05D005287 ORTHO05D006893 6.0e-08 60.5 67 47.8
arahy.Tifrunner.gnm1.ann1.PUP4D7 Arachis hypogaea HOM05D005287 ORTHO05D006893 7.9e-08 60.1 29 96.6
Haze_16934 Corylus avellana HOM05D005287 ORTHO05D006893 1.3e-07 59.3 54 55.6
CiPaw.01G276400 Carya illinoinensis HOM05D005287 ORTHO05D006893 1.8e-07 58.9 70 44.3
Lj1E922T3 Lonicera japonica HOM05D005287 ORTHO05D006893 1.8e-07 58.9 65 52.3
Dinv11806 Davidia involucrata HOM05D005287 ORTHO05D006893 2.3e-07 58.5 70 45.7
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 3.0e-07 58.2 69 46.4
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 3.0e-07 58.2 69 46.4
Ciclev10033834m.g Citrus clementina HOM05D005287 ORTHO05D006893 3.9e-07 57.8 64 43.8
Gohir.A04G096900 Gossypium hirsutum HOM05D005287 ORTHO05D006893 5.1e-07 57.4 67 49.3
Sabra10G0168300 Salix brachista HOM05D005287 ORTHO05D006893 5.1e-07 57.4 52 57.7
Sed0021424 Sechium edule HOM05D005287 ORTHO05D006893 5.1e-07 57.4 73 50.7
MELO3C011729.2 Cucumis melo HOM05D005287 ORTHO05D006893 8.7e-07 56.6 70 45.7
Gohir.D04G136700 Gossypium hirsutum HOM05D005287 ORTHO05D006893 1.1e-06 56.2 67 49.3
Gorai.012G120500 Gossypium raimondii HOM05D005287 ORTHO05D006893 1.1e-06 56.2 67 49.3
TWI15G0219 Tripterygium wilfordii HOM05D005287 ORTHO05D006893 1.1e-06 56.2 54 53.7
CSS0048123 Camellia sinensis var. sinensis HOM05D005287 ORTHO05D006893 1.5e-06 55.8 70 42.9
MD01G1131000 Malus domestica HOM05D005287 ORTHO05D006893 1.9e-06 55.5 53 56.6
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 1.9e-06 55.5 68 42.6
Rhsim06G0174700 Rhododendron simsii HOM05D005287 ORTHO05D006893 1.9e-06 55.5 69 43.5
QL08p056824 Quercus lobata HOM05D005287 ORTHO05D006893 2.5e-06 55.1 68 44.1
CsaV3_5G006270 Cucumis sativus L. HOM05D005287 ORTHO05D006893 4.3e-06 54.3 70 44.3
SHI08859 Sapria himalayana HOM05D005287 ORTHO05D006893 4.3e-06 54.3 56 48.2
TAR376G0736 Trochodendron aralioides HOM05D005287 ORTHO05D006893 4.3e-06 54.3 68 42.6
CANSAT54G2917 Cannabis sativa HOM05D005287 ORTHO05D006893 5.6e-06 53.9 69 40.6
Eucgr.G02802 Eucalyptus grandis HOM05D005287 ORTHO05D006893 5.6e-06 53.9 61 49.2
COL.COLO4_23731 Corchorus olitorius HOM05D005287 ORTHO05D006893 9.6e-06 53.1 52 53.8
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 9.6e-06 53.1 65 44.6
Thecc.10G068400 Theobroma cacao HOM05D005287 ORTHO05D006893 9.6e-06 53.1 67 46.3


User provided reference genes

Program Settings