Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.8e-241 837.4 419 100.0
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.1e-212 740.7 445 86.5
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 1.9e-141 506.5 420 64.5
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.3e-134 483.8 420 63.6
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 6.9e-131 471.5 420 62.9
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 9.9e-130 467.6 413 62.7
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 2.9e-129 466.1 421 63.2
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 3.0e-126 456.1 420 58.3
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.1e-123 447.6 372 62.6
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 2.2e-121 439.9 330 67.0
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 2.2e-121 439.9 330 67.0
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-116 423.3 247 88.7
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.4e-115 419.9 243 88.5
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 4.6e-111 405.6 401 54.6
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 1.8e-107 393.7 398 53.8
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 2.4e-107 393.3 411 51.8
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 3.1e-107 392.9 389 53.7
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 6.9e-107 391.7 408 52.7
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 2.6e-106 389.8 358 56.7
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 5.0e-105 385.6 412 51.7
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 8.5e-105 384.8 353 55.8
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.4e-104 384.0 410 50.2
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 7.2e-104 381.7 393 50.4
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 2.7e-103 379.8 316 60.8
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 3.6e-103 379.4 409 50.6
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 2.3e-102 376.7 324 57.1
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 5.1e-102 375.6 353 54.1
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 8.7e-102 374.8 416 50.5
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.5e-101 374.0 415 49.4
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.9e-101 373.6 415 49.4
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.3e-101 372.9 410 50.0
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 3.3e-101 372.9 351 54.4
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 7.4e-101 371.7 336 58.0
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 4.8e-100 369.0 416 51.0
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 8.2e-100 368.2 413 49.2
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 4.1e-99 365.9 415 49.9
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 6.9e-99 365.2 285 71.2
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 6.9e-99 365.2 326 57.4
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 9.1e-99 364.8 352 55.1
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 9.1e-99 364.8 414 49.5
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 1.5e-98 364.0 331 57.7
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 2.0e-98 363.6 350 55.7
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 3.4e-98 362.8 427 48.7
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 1.0e-97 361.3 410 48.8
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.3e-97 360.9 327 58.4
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 5.0e-97 359.0 351 53.6
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 5.0e-97 359.0 408 49.3
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 6.5e-97 358.6 415 47.2
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.1e-96 357.8 417 47.2
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.4e-96 357.5 319 58.9
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 3.2e-96 356.3 349 53.3
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 3.2e-96 356.3 408 49.8
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 7.2e-96 355.1 449 45.7
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 9.4e-96 354.8 416 48.1
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 9.4e-96 354.8 313 58.5
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.2e-95 354.4 412 49.8
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.2e-95 354.4 412 49.3
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.7e-95 352.4 312 64.7
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 4.7e-95 352.4 326 53.1
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 6.1e-95 352.1 375 52.0
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 3.0e-94 349.7 327 56.3
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 3.9e-94 349.4 412 48.1
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 8.8e-94 348.2 345 51.6
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 6.3e-92 342.0 291 61.2
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 2.4e-91 340.1 407 48.9
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 2.4e-91 340.1 352 50.9
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 9.1e-91 338.2 407 47.7
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 2.0e-90 337.0 424 46.0
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.5e-90 335.9 274 69.0
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 4.5e-90 335.9 421 45.1
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 7.7e-90 335.1 312 56.1
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.3e-89 334.3 301 55.1
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 3.2e-88 329.7 392 48.5
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 4.2e-88 329.3 418 48.1
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 7.2e-88 328.6 422 46.2
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 2.1e-87 327.0 423 46.6
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 2.1e-87 327.0 423 46.8
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 3.6e-87 326.2 426 46.7
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 4.7e-87 325.9 421 45.4
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-86 324.3 287 64.5
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 2.3e-86 323.6 419 46.3
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.3e-86 323.6 413 47.0
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 1.5e-85 320.9 424 45.8
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.5e-85 320.9 326 50.3
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 2.0e-85 320.5 426 46.0
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 2.6e-85 320.1 438 46.1
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 4.4e-85 319.3 319 51.4
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 7.4e-85 318.5 434 45.9
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 2.8e-84 316.6 317 51.1
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 5.3e-83 312.4 329 53.8
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 7.0e-83 312.0 439 44.6
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 1.2e-82 311.2 441 44.4
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 7.7e-82 308.5 334 56.0
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 3.8e-81 306.2 409 44.0
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 3.8e-81 306.2 318 54.7
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.1e-80 304.7 350 45.1
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 3.2e-80 303.1 169 91.7
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 7.2e-80 302.0 411 44.0
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 9.4e-80 301.6 254 61.0
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 1.4e-78 297.7 350 47.1
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 8.8e-78 295.0 410 42.9
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.7e-76 290.8 257 58.0
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 7.0e-75 285.4 210 74.3
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 8.0e-71 271.9 277 58.8
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 6.8e-70 268.9 344 42.4
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 6.3e-68 262.3 369 40.9
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.7e-65 254.2 329 44.7
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-64 251.5 136 93.4
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 4.7e-63 246.1 386 38.6
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 2.5e-56 223.8 210 56.2
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 4.3e-56 223.0 247 50.6
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 2.5e-48 197.2 190 51.6
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 4.3e-48 196.4 192 52.6
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 1.8e-46 191.0 279 44.4
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.7e-44 183.3 217 47.5
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 4.7e-39 166.4 338 32.5
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 5.2e-38 162.9 367 32.4
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.9e-36 156.4 353 31.2
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.1e-35 153.3 267 37.5
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.7e-33 147.9 202 44.1
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 1.9e-32 144.4 151 51.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 6.8e-30 136.0 293 29.7
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 6.9e-22 109.4 107 50.5
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 6.4e-20 102.8 181 33.1
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 2.1e-18 97.8 48 95.8
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 3.5e-18 97.1 68 73.5
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.5e-16 91.7 225 31.1
arahy.Tifrunner.gnm1.ann1.I3MG1X Arachis hypogaea HOM05D001891 ORTHO05D005832 6.9e-14 82.8 41 92.7
arahy.Tifrunner.gnm1.ann1.QCHX4X Arachis hypogaea HOM05D000368 ORTHO05D009348 2.7e-10 70.9 39 82.1
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 3.0e-09 67.4 82 43.9


User provided reference genes

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