Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 2.5e-220 768.5 385 100.0
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.2e-153 547.0 406 73.9
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.2e-153 547.0 406 73.9
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.1e-151 540.4 405 73.1
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 4.4e-148 528.5 403 72.2
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 1.7e-147 526.6 403 72.2
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 1.7e-147 526.6 403 72.2
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 1.7e-147 526.6 403 72.2
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 1.7e-147 526.6 403 72.2
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 1.7e-144 516.5 402 71.1
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 1.6e-142 510.0 401 70.3
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.8e-141 506.5 402 70.1
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.8e-141 506.5 402 70.1
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.8e-141 506.5 402 70.1
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 3.9e-141 505.4 402 69.9
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 3.9e-141 505.4 334 80.8
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 4.4e-140 501.9 402 69.4
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 7.4e-140 501.1 402 69.7
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 7.4e-140 501.1 402 69.7
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 9.7e-140 500.7 403 69.5
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 9.7e-140 500.7 403 69.5
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.7e-139 500.0 402 69.2
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.8e-139 498.4 392 69.9
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 3.1e-138 495.7 404 69.3
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.6e-137 493.4 402 68.2
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 2.6e-137 492.7 402 68.7
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 1.6e-134 483.4 344 76.5
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.7e-134 481.9 402 66.7
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.2e-133 478.4 399 67.4
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 1.5e-132 476.9 402 68.4
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.5e-132 476.9 402 68.4
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-132 476.9 399 67.2
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 5.7e-132 474.9 379 69.1
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 1.3e-131 473.8 403 67.2
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 2.8e-131 472.6 387 68.5
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 2.8e-131 472.6 387 68.5
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 7.0e-130 468.0 397 67.0
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 1.6e-129 466.8 400 66.2
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.7e-129 466.1 384 67.7
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 1.0e-128 464.2 366 70.5
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.1e-126 456.4 354 70.9
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 1.2e-124 450.7 396 66.4
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 4.1e-122 442.2 378 66.4
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-121 440.7 387 66.4
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.0e-121 439.9 370 66.8
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 2.3e-120 436.4 414 61.1
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 8.0e-118 427.9 271 84.1
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 8.0e-118 427.9 271 84.1
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 5.0e-112 408.7 322 69.3
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.9e-111 406.8 398 60.1
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-105 386.0 364 62.1
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 6.6e-104 381.7 364 61.5
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.1e-101 374.4 271 75.3
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 1.8e-101 373.6 271 76.0
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-99 365.9 385 58.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 6.2e-94 348.6 337 60.8
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 4.4e-92 342.4 277 69.7
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 4.9e-91 339.0 281 66.5
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 7.3e-87 325.1 261 69.0
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-86 323.2 368 53.8
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 6.2e-86 322.0 266 68.8
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 1.8e-85 320.5 308 62.0
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 6.8e-85 318.5 233 75.5
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 6.8e-85 318.5 272 68.4
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 6.8e-85 318.5 352 54.8
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-84 317.8 374 55.1
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 4.9e-83 312.4 271 67.2
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-82 308.9 271 66.8
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 5.1e-80 302.4 339 55.2
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.5e-79 300.8 247 67.6
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 7.3e-79 298.5 265 63.8
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 6.2e-78 295.4 346 52.9
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 9.0e-77 291.6 212 76.4
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-75 285.4 341 54.3
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-74 282.3 225 72.9
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-73 279.3 271 59.0
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 1.5e-71 274.2 238 64.7
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 5.6e-71 272.3 273 59.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-70 270.8 368 48.4
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-70 270.4 215 72.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-67 260.4 325 52.9
Lsat_1_v5_gn_4_121001 Lactuca sativa HOM05D001560 ORTHO05D003613 5.3e-61 239.2 178 73.0
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 2.6e-60 236.9 250 57.2
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 4.5e-60 236.1 208 64.4
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-59 234.2 363 44.9
ATR0693G347 Amborella trichopoda HOM05D001560 ORTHO05D003613 5.5e-58 229.2 175 70.3
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-57 226.5 206 62.1
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 6.0e-57 225.7 210 61.4
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.8e-56 224.2 253 55.3
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.5e-55 221.1 232 55.2
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.4e-53 214.5 383 42.6
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-52 211.1 399 42.1
Solyc11g030890.3 Solanum lycopersicum HOM05D001560 ORTHO05D003613 7.6e-52 208.8 190 64.7
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-51 207.6 185 67.0
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 4.9e-51 206.1 200 61.5
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-50 204.9 238 55.0
Nitab4.5_0002739g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.3e-48 197.2 129 82.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.8e-46 189.5 193 58.0
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 8.2e-46 188.7 173 61.3
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.4e-45 188.0 138 73.9
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-45 187.6 206 56.3
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.2e-44 184.9 444 37.4
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 1.5e-44 184.5 161 65.8
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.0e-44 184.1 198 56.6
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.3e-43 181.4 444 36.9
CAN.G497.19 Capsicum annuum HOM05D001560 ORTHO05D003613 2.5e-42 177.2 141 67.4
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.3e-42 175.3 133 73.7
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.7e-41 173.7 252 47.2
TWI75G1342 Tripterygium wilfordii HOM05D001560 ORTHO05D003613 1.9e-39 167.5 109 82.6
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 7.4e-39 165.6 183 56.3
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 9.1e-37 158.7 203 53.2
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-36 156.4 168 54.2
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 2.9e-35 153.7 84 86.9
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 9.4e-34 148.7 152 55.3
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 2.7e-33 147.1 82 86.6
HanXRQChr13g0415511 Helianthus annuus HOM05D001560 ORTHO05D003613 1.4e-32 144.8 109 72.5
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-32 144.4 161 53.4
Sopen09g021510 Solanum pennellii HOM05D001560 ORTHO05D013554 1.1e-31 141.7 102 74.5
Psat1g001600 Pisum sativum HOM05D001560 ORTHO05D003613 1.7e-30 137.9 87 82.8
C01p34990 Brassica napus HOM05D001560 ORTHO05D003613 1.4e-29 134.8 120 64.2
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-28 131.3 143 56.6
HanXRQChr08g0236181 Helianthus annuus HOM05D001560 ORTHO05D003613 7.7e-28 129.0 93 69.9
SHI39096 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-27 127.1 78 78.2
SHI44217 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-27 126.7 85 77.6
SHI34636 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-26 124.0 119 63.9
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 9.4e-26 122.1 138 51.4
CAN.G505.5 Capsicum annuum HOM05D001560 ORTHO05D003613 3.9e-24 116.7 72 77.8
ClCG04G001510 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.1e-23 115.2 108 63.0
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-23 114.4 68 80.9
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-23 114.0 61 85.2
Solyc01g011060.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.3e-23 113.6 67 82.1
Nitab4.5_0000280g0190 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.4e-21 108.2 68 79.4
CAN.G85.15 Capsicum annuum HOM05D001560 ORTHO05D003613 1.6e-20 104.8 164 44.5
Solyc03g013220.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 7.7e-20 102.4 110 58.2
Solyc11g030900.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.3e-19 101.7 66 75.8
SHI51797 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-18 95.9 142 44.4
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.1e-17 92.8 68 72.1
CSS0014898 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 4.0e-16 90.1 99 51.5
Peaxi162Scf00931g00038 Petunia axillaris HOM05D001560 ORTHO05D003613 2.6e-15 87.4 106 55.7
Pp3c23_18180 Physcomitrium patens HOM05D001560 ORTHO05D003613 2.8e-14 84.0 355 25.6
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 8.2e-14 82.4 367 24.8
arahy.Tifrunner.gnm1.ann1.K50RJN Arachis hypogaea HOM05D005210 ORTHO05D011782 8.2e-14 82.4 43 90.7
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-12 77.8 64 68.8
arahy.Tifrunner.gnm1.ann1.VJ3LFE Arachis hypogaea HOM05D005210 ORTHO05D011782 1.3e-11 75.1 49 77.6
Solyc09g057810.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 6.5e-11 72.8 43 76.7
BolSC28t60405H Brassica oleracea HOM05D001560 ORTHO05D003613 4.2e-10 70.1 70 58.6
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 4.2e-10 70.1 70 58.6
Nitab4.5_0000172g0630 Nicotiana tabacum HOM05D001560 ORTHO05D003613 4.2e-10 70.1 45 77.8
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 2.7e-09 67.4 41 85.4
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-09 66.2 48 70.8
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.2e-07 62.0 71 53.5
Pp3c2_31660 Physcomitrium patens HOM05D001560 ORTHO05D003613 1.2e-07 62.0 64 45.3
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 7.5e-07 59.3 87 47.1
BcaC01g01473 Brassica carinata HOM05D001560 ORTHO05D003613 2.2e-06 57.8 38 71.1
C03p92380 Brassica napus HOM05D001560 ORTHO05D003613 2.2e-06 57.8 38 71.1
SHI53219 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-06 57.4 96 40.6


User provided reference genes

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