Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.K64M7Y Arachis hypogaea HOM05D005287 ORTHO05D006893 6.9e-47 190.3 95 100.0
arahy.Tifrunner.gnm1.ann1.VE562J Arachis hypogaea HOM05D005287 ORTHO05D006893 2.5e-44 181.8 95 94.7
arahy.Tifrunner.gnm1.ann1.IRN669 Arachis hypogaea HOM05D005287 ORTHO05D006893 3.6e-43 177.9 95 92.6
arahy.Tifrunner.gnm1.ann1.VJ1NN4 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.0e-42 176.4 95 91.6
arahy.Tifrunner.gnm1.ann1.W4HSG5 Arachis hypogaea HOM05D005287 ORTHO05D006893 6.7e-42 173.7 95 89.5
arahy.Tifrunner.gnm1.ann1.TR9913 Arachis hypogaea HOM05D005287 ORTHO05D006893 3.7e-40 167.9 95 88.4
arahy.Tifrunner.gnm1.ann1.JQA4UT Arachis hypogaea HOM05D005287 ORTHO05D006893 5.5e-36 154.1 81 93.8
arahy.Tifrunner.gnm1.ann1.NBNI0E Arachis hypogaea HOM05D005287 ORTHO05D006893 5.5e-36 154.1 81 93.8
Lalb_Chr06g0171161 Lupinus albus HOM05D005287 ORTHO05D006893 3.5e-22 108.2 81 67.9
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 3.5e-22 108.2 95 58.9
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 5.9e-22 107.5 95 58.9
Ciclev10033834m.g Citrus clementina HOM05D005287 ORTHO05D006893 1.7e-21 105.9 95 58.9
MD07G1179000 Malus domestica HOM05D005287 ORTHO05D006893 2.2e-21 105.5 91 54.9
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 6.5e-21 104.0 95 54.7
QL08p056824 Quercus lobata HOM05D005287 ORTHO05D006893 8.5e-21 103.6 86 59.3
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 1.1e-20 103.2 81 64.2
Prupe.2G218100 Prunus persica HOM05D005287 ORTHO05D006893 1.5e-20 102.8 90 54.4
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 1.9e-20 102.4 95 54.7
MD01G1131000 Malus domestica HOM05D005287 ORTHO05D006893 1.9e-20 102.4 92 54.3
Cfa001595 Carpinus fangiana HOM05D005287 ORTHO05D006893 4.2e-20 101.3 86 58.1
Cfa001592 Carpinus fangiana HOM05D005287 ORTHO05D006893 7.2e-20 100.5 86 57.0
Medtr1g095880 Medicago truncatula HOM05D005287 ORTHO05D006893 9.4e-20 100.1 85 57.6
Potri.010G217600 Populus trichocarpa HOM05D005287 ORTHO05D006893 9.4e-20 100.1 87 55.2
Haze_16934 Corylus avellana HOM05D005287 ORTHO05D006893 1.2e-19 99.8 86 57.0
Manes.10G042800 Manihot esculenta HOM05D005287 ORTHO05D006893 2.1e-19 99.0 86 55.8
Sabra10G0168300 Salix brachista HOM05D005287 ORTHO05D006893 2.1e-19 99.0 87 55.2
Aa31LG8G14080 Aethionema arabicum HOM05D005287 ORTHO05D006893 2.7e-19 98.6 95 51.6
Thhalv10022574m.g Eutrema salsugineum HOM05D005287 ORTHO05D006893 2.7e-19 98.6 95 53.7
CSS0048123 Camellia sinensis var. sinensis HOM05D005287 ORTHO05D006893 4.7e-19 97.8 87 55.2
Eucgr.G02802 Eucalyptus grandis HOM05D005287 ORTHO05D006893 4.7e-19 97.8 95 51.6
AT2G16880 Arabidopsis thaliana HOM05D005287 ORTHO05D006893 1.4e-18 96.3 95 51.6
CARHR107150 Cardamine hirsuta HOM05D005287 ORTHO05D006893 1.4e-18 96.3 95 51.6
Sed0021424 Sechium edule HOM05D005287 ORTHO05D006893 3.0e-18 95.1 86 54.7
RcHm_v2.0_Chr1g0364091 Rosa chinensis HOM05D005287 ORTHO05D006893 4.0e-18 94.7 87 51.7
AL3G49590 Arabidopsis lyrata HOM05D005287 ORTHO05D006893 8.8e-18 93.6 95 50.5
A07p04270 Brassica napus HOM05D005287 ORTHO05D006893 8.8e-18 93.6 95 50.5
BraA07t28218Z Brassica rapa HOM05D005287 ORTHO05D006893 8.8e-18 93.6 95 50.5
SGA_v2.0_scaffold122G33244 Striga asiatica HOM05D005287 ORTHO05D006893 8.8e-18 93.6 95 51.6
BcaB03g16413 Brassica carinata HOM05D005287 ORTHO05D006893 1.5e-17 92.8 95 50.5
ClCG02G013900 Citrullus lanatus HOM05D005287 ORTHO05D006893 1.5e-17 92.8 85 57.6
FAN03G3353 Fragaria x ananassa HOM05D005287 ORTHO05D006893 4.4e-17 91.3 88 45.5
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 4.4e-17 91.3 95 49.5
Rhsim06G0174700 Rhododendron simsii HOM05D005287 ORTHO05D006893 5.7e-17 90.9 88 52.3
FvH4_7g20132 Fragaria vesca HOM05D005287 ORTHO05D006893 7.5e-17 90.5 88 45.5
FAN06G3074 Fragaria x ananassa HOM05D005287 ORTHO05D006893 7.5e-17 90.5 88 45.5
SHI08859 Sapria himalayana HOM05D005287 ORTHO05D006893 1.3e-16 89.7 87 49.4
Lj5g0006814 Lotus japonicus HOM05D005287 ORTHO05D006893 1.7e-16 89.4 85 55.3
CiPaw.01G276400 Carya illinoinensis HOM05D005287 ORTHO05D006893 2.2e-16 89.0 79 58.2
Migut.F01800 Erythranthe guttata HOM05D005287 ORTHO05D006893 2.2e-16 89.0 95 50.5
Glyma.10G213600 Glycine max HOM05D005287 ORTHO05D006893 2.2e-16 89.0 81 55.6
CANSAT54G2917 Cannabis sativa HOM05D005287 ORTHO05D006893 8.3e-16 87.0 86 47.7
FAN01G0321 Fragaria x ananassa HOM05D005287 ORTHO05D006893 1.1e-15 86.7 87 43.7
COL.COLO4_23731 Corchorus olitorius HOM05D005287 ORTHO05D006893 1.8e-15 85.9 81 54.3
Dinv11806 Davidia involucrata HOM05D005287 ORTHO05D006893 1.8e-15 85.9 79 54.4
HanXRQChr09g0246581 Helianthus annuus HOM05D005287 ORTHO05D006893 1.8e-15 85.9 85 49.4
Thecc.10G068400 Theobroma cacao HOM05D005287 ORTHO05D006893 4.1e-15 84.7 81 54.3
FAN10G3161 Fragaria x ananassa HOM05D005287 ORTHO05D006893 1.2e-14 83.2 84 44.0
Lsat_1_v5_gn_9_67461 Lactuca sativa HOM05D005287 ORTHO05D006893 1.2e-14 83.2 87 49.4
BcaC06g36186 Brassica carinata HOM05D005287 ORTHO05D006893 1.6e-14 82.8 95 47.4
C07p06750 Brassica napus HOM05D005287 ORTHO05D006893 1.6e-14 82.8 95 47.4
BolC7t41098H Brassica oleracea HOM05D005287 ORTHO05D006893 1.6e-14 82.8 95 47.4
Gohir.A04G096900 Gossypium hirsutum HOM05D005287 ORTHO05D006893 1.6e-14 82.8 81 50.6
Gohir.D04G136700 Gossypium hirsutum HOM05D005287 ORTHO05D006893 1.6e-14 82.8 81 50.6
Gorai.012G120500 Gossypium raimondii HOM05D005287 ORTHO05D006893 1.6e-14 82.8 81 50.6
Aqoxy5G00866 Aquilegia oxysepala HOM05D005287 ORTHO05D006893 2.7e-14 82.0 81 50.6
DCAR_015277 Daucus carota HOM05D005287 ORTHO05D006893 3.5e-14 81.6 86 47.7
CsaV3_5G006270 Cucumis sativus L. HOM05D005287 ORTHO05D006893 7.7e-14 80.5 79 54.4
arahy.Tifrunner.gnm1.ann1.KW58JW Arachis hypogaea HOM05D005287 ORTHO05D006893 1.0e-13 80.1 69 62.3
MELO3C011729.2 Cucumis melo HOM05D005287 ORTHO05D006893 1.3e-13 79.7 79 54.4
Duzib114G0447 Durio zibethinus HOM05D005287 ORTHO05D006893 2.9e-13 78.6 79 53.2
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 5.0e-13 77.8 93 46.2
EL10Ac2g03556 Beta vulgaris HOM05D005287 ORTHO05D006893 6.5e-13 77.4 86 44.2
Cc09_g02740 Coffea canephora HOM05D005287 ORTHO05D006893 6.5e-13 77.4 72 56.9
Ah.16g108250 Amaranthus hybridus HOM05D005287 ORTHO05D006893 8.6e-13 77.0 81 50.6
Atru.chr12.633 Acer truncatum HOM05D005287 ORTHO05D006893 1.5e-12 76.3 81 54.3
DCAR_001539 Daucus carota HOM05D005287 ORTHO05D006893 1.5e-12 76.3 86 41.9
TAR376G0736 Trochodendron aralioides HOM05D005287 ORTHO05D006893 5.5e-12 74.3 70 54.3
Peaxi162Scf00016g01355 Petunia axillaris HOM05D005287 ORTHO05D006893 7.2e-12 73.9 81 45.7
Ca_10593_v3 Cicer arietinum L. HOM05D005287 ORTHO05D006893 1.6e-11 72.8 79 48.1
MBI16_g17961_MAGBIO Magnolia biondii HOM05D005287 ORTHO05D006893 2.8e-11 72.0 87 44.8
Sc06g0001790 Simmondsia chinensis HOM05D005287 ORTHO05D006893 2.8e-11 72.0 70 52.9
TAR628G1500 Trochodendron aralioides HOM05D005287 ORTHO05D006893 1.4e-10 69.7 69 53.6
arahy.Tifrunner.gnm1.ann1.0HW3LW Arachis hypogaea HOM05D005287 ORTHO05D006893 2.3e-10 68.9 37 89.2
Nitab4.5_0000061g0180 Nicotiana tabacum HOM05D005287 ORTHO05D006893 6.8e-10 67.4 69 55.1
PSO566G0007 Papaver somniferum HOM05D005287 ORTHO05D006893 1.5e-09 66.2 82 43.9
CAN.G588.65 Capsicum annuum HOM05D005287 ORTHO05D006893 3.4e-09 65.1 69 50.7
Sopen01g053530 Solanum pennellii HOM05D005287 ORTHO05D006893 5.7e-09 64.3 76 46.1
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 1.7e-08 62.8 94 37.2
PGSC0003DMG401006177 Solanum tuberosum HOM05D005287 ORTHO05D006893 1.7e-08 62.8 76 44.7
PGSC0003DMG402006177 Solanum tuberosum HOM05D005287 ORTHO05D006893 1.7e-08 62.8 76 44.7
CDE01G0711 Ceratophyllum demersum HOM05D005287 ORTHO05D006893 4.9e-08 61.2 67 47.8
Solyc01g111470.4 Solanum lycopersicum HOM05D005287 ORTHO05D006893 6.3e-08 60.8 76 44.7
THA.LOC104805786 Tarenaya hassleriana HOM05D005287 ORTHO05D006893 2.4e-07 58.9 95 35.8
TWI63G1618 Tripterygium wilfordii HOM05D005287 ORTHO05D006893 3.1e-07 58.5 85 43.5
Cpa.g.sc53.25 Carica papaya HOM05D005287 ORTHO05D006893 7.0e-07 57.4 88 39.8
PGSC0003DMG400004236 Solanum tuberosum HOM05D005287 ORTHO05D006893 7.0e-07 57.4 69 46.4
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 9.2e-07 57.0 94 34.0


User provided reference genes

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