Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.K5CIRV Arachis hypogaea HOM05D005551 ORTHO05D007207 6.1e-64 247.3 121 100.0
arahy.Tifrunner.gnm1.ann1.JZUI2V Arachis hypogaea HOM05D005551 ORTHO05D007207 2.5e-41 172.2 125 74.4
arahy.Tifrunner.gnm1.ann1.HLYA7R Arachis hypogaea HOM05D005551 ORTHO05D007207 3.2e-41 171.8 125 74.4
arahy.Tifrunner.gnm1.ann1.ADF2XW Arachis hypogaea HOM05D005551 ORTHO05D007207 1.6e-40 169.5 125 73.6
Phvul.006G131100 Phaseolus vulgaris HOM05D005551 ORTHO05D007207 1.6e-32 142.9 122 64.8
VMungo0540G2337 Vigna mungo HOM05D005551 ORTHO05D007207 5.2e-31 137.9 118 65.3
Glyma.15G127400 Glycine max HOM05D005551 ORTHO05D007207 1.5e-30 136.3 119 63.0
Glyma.09G021000 Glycine max HOM05D005551 ORTHO05D007207 2.0e-30 136.0 119 63.0
Lalb_Chr20g0119901 Lupinus albus HOM05D005551 ORTHO05D007207 4.4e-30 134.8 123 60.2
TPR.G8526 Trifolium pratense HOM05D005551 ORTHO05D007207 3.2e-28 128.6 118 60.2
Ca_16399_v3 Cicer arietinum L. HOM05D005551 ORTHO05D007207 2.0e-27 125.9 122 57.4
Psat5g100640 Pisum sativum HOM05D005551 ORTHO05D007207 3.0e-26 122.1 118 58.5
Lj6g0008086 Lotus japonicus HOM05D005551 ORTHO05D007207 2.1e-24 115.9 122 58.2
Gorai.013G254300 Gossypium raimondii HOM05D005551 ORTHO05D007207 6.8e-23 110.9 121 58.7
Medtr3g083980 Medicago truncatula HOM05D005551 ORTHO05D007207 2.0e-22 109.4 122 53.3
Gohir.D13G223050 Gossypium hirsutum HOM05D005551 ORTHO05D007207 4.4e-22 108.2 121 57.9
Gohir.D13G223200 Gossypium hirsutum HOM05D005551 ORTHO05D007207 1.3e-21 106.7 120 56.7
Gohir.A13G219500 Gossypium hirsutum HOM05D005551 ORTHO05D007207 8.3e-21 104.0 120 55.8
Atru.chr2.2010 Acer truncatum HOM05D005551 ORTHO05D007207 1.4e-20 103.2 117 51.3
Actinidia24636 Actinidia chinensis HOM05D005551 ORTHO05D007207 2.4e-20 102.4 118 50.8
TAR369G0326 Trochodendron aralioides HOM05D005551 ORTHO05D007207 4.1e-20 101.7 120 50.8
Duzib150G0889 Durio zibethinus HOM05D005551 ORTHO05D007207 7.0e-20 100.9 117 51.3
Dinv24609 Davidia involucrata HOM05D005551 ORTHO05D007207 1.6e-19 99.8 126 50.8
GSVIVG01037384001 Vitis vinifera HOM05D005551 ORTHO05D007207 1.6e-19 99.8 111 55.9
Atru.chr4.868 Acer truncatum HOM05D005551 ORTHO05D007207 2.7e-19 99.0 117 46.2
Actinidia29559 Actinidia chinensis HOM05D005551 ORTHO05D007207 2.7e-19 99.0 123 48.8
COL.COLO4_33261 Corchorus olitorius HOM05D005551 ORTHO05D007207 2.7e-19 99.0 117 51.3
Thecc.09G251700 Theobroma cacao HOM05D005551 ORTHO05D007207 7.8e-19 97.4 119 51.3
Manes.02G135300 Manihot esculenta HOM05D005551 ORTHO05D007207 1.0e-18 97.1 123 48.8
Haze_23554 Corylus avellana HOM05D005551 ORTHO05D007207 1.3e-18 96.7 117 54.7
THA.LOC104816954 Tarenaya hassleriana HOM05D005551 ORTHO05D007207 1.5e-17 93.2 119 51.3
BraA06t23757Z Brassica rapa HOM05D005551 ORTHO05D007207 1.9e-17 92.8 117 48.7
CiPaw.13G146700 Carya illinoinensis HOM05D005551 ORTHO05D007207 1.9e-17 92.8 98 57.1
Cc02_g08840 Coffea canephora HOM05D005551 ORTHO05D007207 1.9e-17 92.8 128 45.3
QL01p016086 Quercus lobata HOM05D005551 ORTHO05D007207 1.9e-17 92.8 124 50.0
BcaB07g34093 Brassica carinata HOM05D005551 ORTHO05D007207 3.3e-17 92.0 117 46.2
C05p06600 Brassica napus HOM05D005551 ORTHO05D007207 3.3e-17 92.0 117 46.2
BolC5t29420H Brassica oleracea HOM05D005551 ORTHO05D007207 3.3e-17 92.0 117 46.2
vmacro01506 Vaccinium macrocarpon HOM05D005551 ORTHO05D007207 4.3e-17 91.7 125 46.4
CSS0046738 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 5.6e-17 91.3 130 46.2
Cfa010168 Carpinus fangiana HOM05D005551 ORTHO05D007207 5.6e-17 91.3 118 51.7
Sp1g07150 Schrenkiella parvula HOM05D005551 ORTHO05D007207 5.6e-17 91.3 118 47.5
CARHR008380 Cardamine hirsuta HOM05D005551 ORTHO05D007207 7.3e-17 90.9 118 51.7
Prupe.1G566600 Prunus persica HOM05D005551 ORTHO05D007207 7.3e-17 90.9 120 46.7
Carub.0001s0785 Capsella rubella HOM05D005551 ORTHO05D007207 9.5e-17 90.5 118 50.8
Cpa.g.sc34.204 Carica papaya HOM05D005551 ORTHO05D007207 9.5e-17 90.5 89 59.6
Nitab4.5_0000914g0030 Nicotiana tabacum HOM05D005551 ORTHO05D007207 1.2e-16 90.1 119 46.2
Peaxi162Scf00015g00309 Petunia axillaris HOM05D005551 ORTHO05D007207 1.2e-16 90.1 127 48.0
Ciclev10015188m.g Citrus clementina HOM05D005551 ORTHO05D007207 1.6e-16 89.7 120 50.0
Aa31sc55G30 Aethionema arabicum HOM05D005551 ORTHO05D007207 2.8e-16 89.0 117 44.4
CSS0006172 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 2.8e-16 89.0 132 45.5
MELO3C014533.2 Cucumis melo HOM05D005551 ORTHO05D007207 3.6e-16 88.6 131 46.6
Rhsim11G0088800 Rhododendron simsii HOM05D005551 ORTHO05D007207 3.6e-16 88.6 102 49.0
CAN.G1465.10 Capsicum annuum HOM05D005551 ORTHO05D007207 4.7e-16 88.2 46 87.0
AL1G18920 Arabidopsis lyrata HOM05D005551 ORTHO05D007207 1.1e-15 87.0 118 50.0
Sed0003862 Sechium edule HOM05D005551 ORTHO05D007207 1.1e-15 87.0 126 44.4
Sopen05g033460 Solanum pennellii HOM05D005551 ORTHO05D007207 1.1e-15 87.0 119 44.5
MBI15_g32286_MAGBIO Magnolia biondii HOM05D005551 ORTHO05D007207 1.4e-15 86.7 123 50.4
Thhalv10007548m.g Eutrema salsugineum HOM05D005551 ORTHO05D007207 1.8e-15 86.3 118 45.8
Solyc05g055000.4 Solanum lycopersicum HOM05D005551 ORTHO05D007207 1.8e-15 86.3 119 44.5
TWI75G1278 Tripterygium wilfordii HOM05D005551 ORTHO05D007207 1.8e-15 86.3 128 46.9
CANSAT54G1233 Cannabis sativa HOM05D005551 ORTHO05D007207 2.3e-15 85.9 117 50.4
CsaV3_6G038690 Cucumis sativus L. HOM05D005551 ORTHO05D001189 2.3e-15 85.9 131 45.0
Sc06g0004770 Simmondsia chinensis HOM05D005551 ORTHO05D007207 2.3e-15 85.9 109 52.3
AUR62004128 Chenopodium quinoa HOM05D005551 ORTHO05D007207 4.0e-15 85.1 46 87.0
MD15G1421300 Malus domestica HOM05D005551 ORTHO05D007207 5.2e-15 84.7 120 44.2
Nitab4.5_0008548g0010 Nicotiana tabacum HOM05D005551 ORTHO05D007207 5.2e-15 84.7 45 84.4
Sabra09G0049100 Salix brachista HOM05D005551 ORTHO05D007207 5.2e-15 84.7 123 48.8
DCAR_021423 Daucus carota HOM05D005551 ORTHO05D007207 6.8e-15 84.3 45 84.4
PGR119G1886 Punica granatum HOM05D005551 ORTHO05D007207 8.9e-15 84.0 126 48.4
Eucgr.B03759 Eucalyptus grandis HOM05D005551 ORTHO05D007207 2.6e-14 82.4 45 86.7
Nn2g10251 Nelumbo nucifera HOM05D005551 ORTHO05D007207 2.6e-14 82.4 45 86.7
EL10Ac1g00799 Beta vulgaris HOM05D005551 ORTHO05D007207 4.4e-14 81.6 45 84.4
Potri.009G066000 Populus trichocarpa HOM05D005551 ORTHO05D007207 5.8e-14 81.3 123 46.3
AT1G08490 Arabidopsis thaliana HOM05D005551 ORTHO05D007207 7.5e-14 80.9 119 47.9
Sed0004770 Sechium edule HOM05D005551 ORTHO05D007207 9.8e-14 80.5 44 79.5
Lj2C43G5 Lonicera japonica HOM05D005551 ORTHO05D007207 1.3e-13 80.1 45 80.0
RcHm_v2.0_Chr1g0329781 Rosa chinensis HOM05D005551 ORTHO05D007207 1.3e-13 80.1 45 80.0
Hund27398 Selenicereus undatus HOM05D005551 ORTHO05D007207 1.3e-13 80.1 93 50.5
FvH4_7g04510 Fragaria vesca HOM05D005551 ORTHO05D007207 1.7e-13 79.7 45 82.2
FAN06G0985 Fragaria x ananassa HOM05D005551 ORTHO05D007207 1.7e-13 79.7 45 82.2
FAN06G4389 Fragaria x ananassa HOM05D005551 ORTHO05D007207 1.7e-13 79.7 45 82.2
PSO339G0296 Papaver somniferum HOM05D005551 ORTHO05D007207 1.7e-13 79.7 118 44.9
EL10Ac4g10072 Beta vulgaris HOM05D005551 ORTHO05D007207 2.2e-13 79.3 45 80.0
FvH4_7g04540 Fragaria vesca HOM05D005551 ORTHO05D007207 2.2e-13 79.3 45 82.2
FAN03G2212 Fragaria x ananassa HOM05D005551 ORTHO05D007207 2.9e-13 79.0 45 80.0
FAN10G0679 Fragaria x ananassa HOM05D005551 ORTHO05D007207 2.9e-13 79.0 46 78.3
MSTRG.22962 Avicennia marina HOM05D005551 ORTHO05D007207 3.7e-13 78.6 45 77.8
SEGI_36821 Sequoiadendron giganteum HOM05D005551 ORTHO05D007207 3.7e-13 78.6 58 65.5
Migut.I00341 Erythranthe guttata HOM05D005551 ORTHO05D007207 4.9e-13 78.2 118 44.1
Aqoxy2G00719 Aquilegia oxysepala HOM05D005551 ORTHO05D007207 6.4e-13 77.8 121 43.8
SalBow5G3184 Salvia bowleyana HOM05D005551 ORTHO05D007207 6.4e-13 77.8 46 73.9
ATR1127G182 Amborella trichopoda HOM05D005551 ORTHO05D007207 1.1e-12 77.0 45 77.8
Mapoly0010s0063 Marchantia polymorpha HOM05D005551 ORTHO05D007207 1.1e-12 77.0 83 50.6
AUR62000231 Chenopodium quinoa HOM05D005551 ORTHO05D007207 1.4e-12 76.6 44 77.3
ECA234G2543 Erigeron canadensis HOM05D005551 ORTHO05D007207 1.4e-12 76.6 118 42.4
SGA_v2.0_scaffold28G11755 Striga asiatica HOM05D005551 ORTHO05D007207 1.4e-12 76.6 44 77.3
PSO384G1940 Papaver somniferum HOM05D005551 ORTHO05D007207 1.9e-12 76.3 118 44.9
Pp3c23_8390 Physcomitrium patens HOM05D005551 ORTHO05D007207 1.9e-12 76.3 45 80.0
AagrBONN_evm.TU.Sc2ySwM_117.1158 Anthoceros agrestis HOM05D005551 ORTHO05D007207 2.4e-12 75.9 45 77.8
AUR62006577 Chenopodium quinoa HOM05D005551 ORTHO05D007207 2.4e-12 75.9 45 75.6
CDE04G0986 Ceratophyllum demersum HOM05D005551 ORTHO05D007207 4.1e-12 75.1 45 77.8
HanXRQChr05g0144321 Helianthus annuus HOM05D005551 ORTHO05D007207 7.1e-12 74.3 62 58.1
HanXRQChr14g0433441 Helianthus annuus HOM05D005551 ORTHO05D007207 1.2e-11 73.6 62 58.1
SMO347G0159 Selaginella moellendorffii HOM05D005551 ORTHO05D007207 1.6e-11 73.2 45 77.8
Lsat_1_v5_gn_1_112501 Lactuca sativa HOM05D005551 ORTHO05D007207 2.1e-11 72.8 42 76.2
Pp3c24_10350 Physcomitrium patens HOM05D005551 ORTHO05D007207 2.7e-11 72.4 45 75.6
unitig_749.g13431 Utricularia gibba HOM05D005551 ORTHO05D007207 7.8e-11 70.9 120 37.5
CBR_g4414 Chara braunii HOM05D005551 ORTHO05D007207 1.0e-10 70.5 45 71.1
CBR_g45931 Chara braunii HOM05D005551 ORTHO05D007207 1.0e-10 70.5 45 71.1
ClCG02G022570 Citrullus lanatus HOM05D005551 ORTHO05D007207 1.0e-10 70.5 119 44.5
HPP92_018084 Vanilla planifolia HOM05D005551 ORTHO05D007207 1.0e-10 70.5 47 70.2
SGA_v2.0_scaffold25G10959 Striga asiatica HOM05D005551 ORTHO05D007207 5.1e-10 68.2 38 78.9
Zm00001eb195480 Zea mays HOM05D005551 ORTHO05D007207 6.6e-10 67.8 45 68.9
BcaC01g05362 Brassica carinata HOM05D005551 ORTHO05D007207 8.6e-10 67.4 50 64.0
Cre12.g525650 Chlamydomonas reinhardtii HOM05D005551 ORTHO05D007207 4.3e-09 65.1 45 66.7
MCO11G678 Micromonas commoda HOM05D005551 ORTHO05D007207 3.4e-06 55.5 41 56.1


User provided reference genes

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