Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.6e-233 812.4 414 100.0
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.6e-159 565.8 398 78.1
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.9e-133 479.9 402 67.2
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 6.1e-132 474.9 399 66.9
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 5.7e-130 468.4 399 66.2
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 4.9e-129 465.3 398 64.6
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 2.7e-127 459.5 398 64.6
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.7e-127 459.5 398 65.3
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 4.3e-125 452.2 391 63.7
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.8e-124 449.5 366 65.0
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.7e-124 448.7 388 65.5
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 8.0e-124 448.0 393 62.3
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.0e-123 447.6 401 60.6
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 3.4e-122 442.6 375 63.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 3.4e-122 442.6 449 57.9
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.9e-121 439.5 374 63.1
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.9e-121 438.7 394 60.4
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 8.3e-121 438.0 398 60.3
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 8.3e-121 438.0 366 63.7
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 4.1e-120 435.6 398 59.8
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 5.4e-120 435.3 367 62.7
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 7.0e-120 434.9 398 58.3
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.2e-119 434.1 371 61.2
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.6e-119 433.7 370 63.2
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.3e-118 430.6 366 62.3
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.3e-118 429.9 398 59.0
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.3e-118 429.9 365 63.3
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.3e-118 429.9 397 59.7
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.9e-118 429.1 363 63.4
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 6.6e-118 428.3 365 63.3
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.9e-117 426.8 402 59.7
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 2.5e-117 426.4 367 61.9
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.3e-117 426.0 365 63.0
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 7.3e-117 424.9 364 62.9
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 7.3e-117 424.9 366 62.3
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.2e-116 424.1 397 57.4
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.2e-116 424.1 371 59.6
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.6e-116 423.7 398 57.5
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.1e-116 423.3 398 59.0
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.8e-116 422.9 392 58.2
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 3.6e-116 422.5 399 56.9
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 3.6e-116 422.5 394 58.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 4.7e-116 422.2 396 57.8
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 8.1e-116 421.4 395 58.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.4e-115 420.6 368 61.7
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 4.0e-115 419.1 374 60.2
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 5.2e-115 418.7 393 55.7
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.2e-114 417.5 398 56.5
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.5e-114 417.2 354 65.0
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.5e-114 417.2 398 56.5
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 2.6e-114 416.4 365 62.7
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 2.6e-114 416.4 373 59.8
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 2.6e-114 416.4 371 59.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.6e-114 416.4 404 58.4
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 4.4e-114 415.6 397 60.5
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 4.4e-114 415.6 365 63.0
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 4.4e-114 415.6 365 63.0
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 5.8e-114 415.2 365 63.0
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 5.8e-114 415.2 399 56.6
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.3e-113 414.1 400 57.8
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.3e-113 414.1 365 62.5
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.7e-113 413.7 392 56.4
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.9e-113 412.9 366 63.1
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 4.9e-113 412.1 378 57.4
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 6.4e-113 411.8 362 62.4
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 8.3e-113 411.4 397 59.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 8.3e-113 411.4 368 59.8
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.1e-112 411.0 365 62.5
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.1e-112 411.0 367 58.9
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.1e-112 411.0 407 56.5
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.9e-112 410.2 365 62.5
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 5.4e-112 408.7 373 57.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 3.5e-111 406.0 388 56.7
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 4.6e-111 405.6 394 56.6
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 6.6e-110 401.7 357 58.3
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.5e-109 399.8 367 57.8
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.6e-109 398.7 365 58.9
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 2.8e-108 396.4 349 59.3
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 4.0e-107 392.5 371 56.9
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 8.9e-107 391.3 428 53.3
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 4.1e-104 382.5 358 56.7
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 5.4e-104 382.1 366 56.3
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.5e-101 373.2 371 54.2
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 4.3e-101 372.5 364 54.7
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 5.6e-101 372.1 367 55.6
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 7.3e-101 371.7 387 54.0
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 4.9e-97 359.0 353 55.2
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 9.3e-96 354.8 290 64.8
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 5.6e-93 345.5 371 50.9
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 5.8e-90 335.5 329 54.7
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.8e-86 323.9 301 59.1
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 3.1e-83 313.2 413 46.0
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 7.9e-79 298.5 534 38.0
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 8.7e-78 295.0 363 47.4
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 3.3e-77 293.1 238 63.0
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.1e-75 288.1 334 48.2
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.0e-75 286.2 364 47.8
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 3.4e-74 283.1 258 57.4
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 4.2e-72 276.2 249 59.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 9.4e-56 221.9 201 54.7
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.7e-54 215.7 240 51.2
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 2.6e-53 213.8 402 33.1
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.6e-47 193.4 294 42.9
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 8.8e-46 188.7 346 37.0
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 7.4e-45 185.7 156 62.8
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.0e-41 175.3 162 57.4
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.0e-41 172.9 97 82.5
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 2.6e-37 160.6 335 34.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.2e-32 143.7 82 76.8
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 8.0e-31 139.0 389 29.8
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.2e-28 131.0 75 81.3
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.1e-27 126.7 154 55.2
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.1e-24 118.6 81 66.7
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.8e-20 104.0 85 61.2
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.2e-18 98.6 76 60.5
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 8.6e-17 92.4 153 40.5
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 2.1e-15 87.8 149 36.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.3e-09 68.6 38 71.1
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 2.8e-07 60.8 65 50.8
Thecc.02G318900 Theobroma cacao HOM05D003438 ORTHO05D004235 5.2e-06 56.6 272 22.8


User provided reference genes

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