Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 5.9e-29 130.2 66 100.0
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.5e-24 115.5 58 100.0
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 5.7e-24 113.6 58 98.3
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 4.8e-23 110.5 58 91.4
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 6.3e-23 110.2 58 91.4
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 1.1e-22 109.4 58 89.7
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 1.4e-22 109.0 58 91.4
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 1.8e-22 108.6 58 89.7
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 3.1e-22 107.8 58 87.9
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 5.4e-22 107.1 59 86.4
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 5.4e-22 107.1 57 89.5
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 5.4e-22 107.1 57 89.5
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 7.0e-22 106.7 57 87.7
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 7.0e-22 106.7 58 87.9
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 1.2e-21 105.9 58 82.8
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 1.6e-21 105.5 57 89.5
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.6e-21 105.5 58 86.2
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.6e-21 105.5 58 86.2
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 1.6e-21 105.5 58 86.2
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 2.0e-21 105.1 58 86.2
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 2.0e-21 105.1 58 84.5
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 2.0e-21 105.1 58 87.9
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 2.0e-21 105.1 58 87.9
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 2.7e-21 104.8 58 82.8
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 2.7e-21 104.8 58 81.0
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 2.7e-21 104.8 58 84.5
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 3.5e-21 104.4 58 86.2
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 4.5e-21 104.0 58 86.2
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 5.9e-21 103.6 58 84.5
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 7.7e-21 103.2 58 82.8
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 7.7e-21 103.2 58 82.8
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 7.7e-21 103.2 58 84.5
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 1.0e-20 102.8 58 86.2
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 1.0e-20 102.8 61 78.7
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 1.0e-20 102.8 57 86.0
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 1.3e-20 102.4 58 82.8
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 1.3e-20 102.4 58 84.5
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 1.3e-20 102.4 58 81.0
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 1.3e-20 102.4 58 81.0
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 1.3e-20 102.4 58 81.0
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.7e-20 102.1 58 82.8
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.7e-20 102.1 58 82.8
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 1.7e-20 102.1 61 78.7
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.7e-20 102.1 58 81.0
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 2.3e-20 101.7 58 81.0
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 2.3e-20 101.7 58 84.5
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 2.3e-20 101.7 58 81.0
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 2.3e-20 101.7 58 86.2
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 2.3e-20 101.7 58 86.2
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 2.3e-20 101.7 58 86.2
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.9e-20 101.3 58 82.8
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 2.9e-20 101.3 58 81.0
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 3.8e-20 100.9 58 82.8
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 3.8e-20 100.9 56 82.1
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 3.8e-20 100.9 58 82.8
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 5.0e-20 100.5 57 84.2
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 6.6e-20 100.1 58 81.0
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 6.6e-20 100.1 58 82.8
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 6.6e-20 100.1 58 82.8
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 8.6e-20 99.8 56 83.9
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 8.6e-20 99.8 56 83.9
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.1e-19 99.4 58 77.6
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 1.1e-19 99.4 58 82.8
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.5e-19 99.0 58 79.3
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.9e-19 98.6 57 82.5
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.9e-19 98.6 57 82.5
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 1.9e-19 98.6 58 77.6
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 1.9e-19 98.6 57 82.5
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.9e-19 98.6 55 83.6
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 1.9e-19 98.6 57 77.2
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.5e-19 98.2 56 82.1
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.5e-19 98.2 56 82.1
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 2.5e-19 98.2 57 82.5
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 2.5e-19 98.2 58 79.3
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 4.2e-19 97.4 57 80.7
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 5.5e-19 97.1 58 82.8
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 5.5e-19 97.1 61 75.4
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 7.2e-19 96.7 57 78.9
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 7.2e-19 96.7 57 80.7
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 7.2e-19 96.7 57 80.7
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 7.2e-19 96.7 57 80.7
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 7.2e-19 96.7 56 80.4
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 7.2e-19 96.7 58 77.6
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 9.5e-19 96.3 58 77.6
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 9.5e-19 96.3 57 78.9
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 1.2e-18 95.9 58 74.1
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 1.6e-18 95.5 57 78.9
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 1.6e-18 95.5 57 78.9
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.6e-18 95.5 58 75.9
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 2.1e-18 95.1 54 85.2
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 3.6e-18 94.4 57 78.9
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 4.7e-18 94.0 58 74.1
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.4e-17 92.4 58 74.1
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 1.3e-15 85.9 87 52.9
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 2.8e-15 84.7 57 66.7
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 4.9e-15 84.0 58 65.5
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 3.1e-14 81.3 57 63.2
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 6.6e-12 73.6 61 63.9
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 1.2e-10 69.3 47 61.7
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 2.9e-07 58.2 40 67.5
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 4.1e-06 54.3 30 76.7
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 5.4e-06 53.9 30 76.7


User provided reference genes

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