Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 2.5e-127 458.8 230 100.0
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 3.1e-125 451.8 230 98.3
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 1.2e-81 307.0 230 66.5
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 4.7e-81 305.1 230 67.4
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 8.0e-81 304.3 230 64.8
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 3.0e-80 302.4 230 65.7
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 2.0e-76 289.7 231 62.8
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 2.6e-71 272.7 235 60.4
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 8.3e-70 267.7 228 61.4
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 7.0e-69 264.6 225 61.3
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 3.9e-59 232.3 159 70.4
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 2.4e-53 213.0 165 63.6
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 3.2e-53 212.6 203 52.2
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 7.8e-52 208.0 212 49.5
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 3.3e-50 202.6 230 50.0
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 7.3e-50 201.4 219 48.9
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 2.0e-47 193.4 222 48.2
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 7.5e-47 191.4 227 42.3
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 6.4e-46 188.3 164 56.1
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 6.4e-46 188.3 224 45.5
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 6.4e-46 188.3 216 46.8
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.4e-45 187.2 222 46.8
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 2.4e-45 186.4 221 44.8
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 2.3e-43 179.9 201 47.8
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 3.3e-42 176.0 215 45.6
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 4.3e-42 175.6 219 45.7
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 9.5e-42 174.5 211 43.1
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 6.2e-41 171.8 216 43.5
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 6.2e-41 171.8 228 43.4
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.4e-40 170.6 205 46.3
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 3.1e-40 169.5 230 41.7
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 4.0e-40 169.1 217 43.3
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 1.2e-39 167.5 181 49.7
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.6e-39 166.4 230 40.9
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 4.4e-39 165.6 212 42.5
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 5.8e-39 165.2 195 48.2
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 7.5e-39 164.9 176 48.9
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 7.5e-39 164.9 222 44.1
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.3e-38 164.1 201 43.8
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.7e-38 163.7 226 42.0
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 4.9e-38 162.2 222 41.4
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 8.3e-38 161.4 230 40.0
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.1e-37 161.0 181 45.3
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 2.4e-37 159.8 154 50.0
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 9.2e-37 157.9 229 42.4
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 1.2e-36 157.5 211 39.8
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 1.6e-36 157.1 157 48.4
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.5e-36 156.0 225 40.0
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 7.8e-36 154.8 181 43.6
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 1.0e-35 154.5 213 38.5
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 1.0e-35 154.5 196 44.9
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 1.0e-35 154.5 149 47.0
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 1.3e-35 154.1 229 41.5
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.3e-35 154.1 219 40.2
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 1.9e-34 150.2 170 44.7
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.3e-34 149.4 213 43.2
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 4.3e-34 149.1 211 40.3
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 2.1e-33 146.7 224 40.2
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 4.7e-33 145.6 191 44.0
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 1.1e-32 144.4 233 38.6
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 4.0e-32 142.5 228 40.8
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 2.1e-28 130.2 135 49.6
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 7.8e-28 128.3 172 38.4
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 1.9e-26 123.6 161 37.3
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 2.8e-25 119.8 158 41.1
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 2.4e-21 106.7 160 40.6
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 5.4e-21 105.5 144 41.7
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 1.3e-19 100.9 153 39.2
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 1.1e-18 97.8 86 48.8
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 4.8e-17 92.4 128 38.3
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.4e-15 86.3 138 35.5
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 1.1e-13 81.3 180 26.7
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.4e-13 80.9 187 26.2
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.9e-13 80.5 186 26.3
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 4.2e-13 79.3 186 25.8
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 4.2e-13 79.3 157 30.6
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 7.1e-13 78.6 213 23.5
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 1.2e-12 77.8 85 44.7
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 2.7e-12 76.6 146 29.5
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 3.5e-12 76.3 162 27.8
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 7.9e-12 75.1 152 27.6
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 7.9e-12 75.1 213 23.5
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 1.0e-11 74.7 189 24.3
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 1.5e-10 70.9 158 25.3
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.5e-10 70.9 167 28.7
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 2.5e-10 70.1 161 24.2
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 5.6e-10 68.9 188 26.1
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 5.6e-10 68.9 199 21.1
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 7.4e-10 68.6 186 24.2
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 2.8e-09 66.6 82 42.7
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 2.8e-09 66.6 170 26.5
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 6.2e-09 65.5 187 26.2
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 1.8e-08 63.9 162 24.1
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 4.0e-08 62.8 157 24.2
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 6.9e-08 62.0 216 23.1
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 9.0e-08 61.6 160 23.8
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 1.2e-07 61.2 188 22.9
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 1.5e-07 60.8 171 23.4
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 2.6e-07 60.1 160 23.1


User provided reference genes

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