Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 2.6e-71 271.9 137 100.0
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 2.2e-14 82.8 45 91.1
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 2.2e-14 82.8 45 91.1
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 2.3e-11 72.8 43 79.1
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 1.2e-10 70.5 42 76.2
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 3.4e-10 68.9 68 51.5
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 4.4e-10 68.6 43 72.1
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 4.4e-10 68.6 45 68.9
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 5.7e-10 68.2 50 68.0
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 7.5e-10 67.8 42 76.2
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 9.8e-10 67.4 44 65.9
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 9.8e-10 67.4 44 72.7
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 9.8e-10 67.4 44 72.7
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 1.3e-09 67.0 42 71.4
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 1.3e-09 67.0 43 69.8
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 1.7e-09 66.6 42 73.8
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 1.7e-09 66.6 43 74.4
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 1.7e-09 66.6 42 69.0
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 2.2e-09 66.2 45 66.7
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 2.2e-09 66.2 45 62.2
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 2.2e-09 66.2 45 62.2
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 2.2e-09 66.2 45 64.4
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.2e-09 66.2 44 70.5
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 2.8e-09 65.9 42 69.0
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 4.8e-09 65.1 44 70.5
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 4.8e-09 65.1 42 71.4
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 6.3e-09 64.7 45 62.2
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 6.3e-09 64.7 50 58.0
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 6.3e-09 64.7 43 62.8
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 6.3e-09 64.7 42 66.7
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 6.3e-09 64.7 54 55.6
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 8.3e-09 64.3 45 60.0
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 1.1e-08 63.9 42 64.3
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 1.4e-08 63.5 60 48.3
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.8e-08 63.2 42 66.7
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.8e-08 63.2 42 66.7
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 1.8e-08 63.2 43 69.8
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 1.8e-08 63.2 42 66.7
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 1.8e-08 63.2 46 58.7
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 2.4e-08 62.8 43 65.1
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 2.4e-08 62.8 42 66.7
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 2.4e-08 62.8 43 65.1
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 3.1e-08 62.4 45 60.0
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 3.1e-08 62.4 73 41.1
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 3.1e-08 62.4 42 66.7
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 4.1e-08 62.0 49 57.1
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 4.1e-08 62.0 45 62.2
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 4.1e-08 62.0 45 62.2
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 4.1e-08 62.0 43 65.1
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 4.1e-08 62.0 43 65.1
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 4.1e-08 62.0 45 57.8
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 7.0e-08 61.2 45 55.6
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 7.0e-08 61.2 42 59.5
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 7.0e-08 61.2 45 57.8
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 7.0e-08 61.2 45 57.8
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 7.0e-08 61.2 45 57.8
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 7.0e-08 61.2 45 57.8
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 7.0e-08 61.2 45 57.8
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 7.0e-08 61.2 41 65.9
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 7.0e-08 61.2 43 62.8
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 7.0e-08 61.2 46 54.3
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 7.0e-08 61.2 44 61.4
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 1.2e-07 60.5 42 61.9
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 1.2e-07 60.5 46 58.7
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 1.6e-07 60.1 45 55.6
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 2.0e-07 59.7 42 61.9
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 2.0e-07 59.7 42 64.3
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 2.0e-07 59.7 46 56.5
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 2.7e-07 59.3 42 64.3
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 2.7e-07 59.3 60 43.3
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 2.7e-07 59.3 44 61.4
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 2.7e-07 59.3 44 61.4
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 2.7e-07 59.3 42 64.3
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 2.7e-07 59.3 41 63.4
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 2.7e-07 59.3 44 61.4
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 3.5e-07 58.9 42 59.5
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 4.5e-07 58.5 42 61.9
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 4.5e-07 58.5 41 61.0
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 5.9e-07 58.2 44 59.1
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 5.9e-07 58.2 42 59.5
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 5.9e-07 58.2 42 59.5
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 1.0e-06 57.4 41 61.0
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 1.0e-06 57.4 41 58.5
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 1.3e-06 57.0 44 59.1
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 1.7e-06 56.6 42 57.1
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 1.7e-06 56.6 51 54.9
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 2.3e-06 56.2 42 54.8
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 2.9e-06 55.8 42 64.3
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 3.8e-06 55.5 41 56.1
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 5.0e-06 55.1 47 48.9
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 6.6e-06 54.7 43 53.5


User provided reference genes

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