Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.J4XL7B Arachis hypogaea HOM05D008500 ORTHO05D005299 1.8e-34 148.7 74 100.0
arahy.Tifrunner.gnm1.ann1.B8M078 Arachis hypogaea HOM05D008500 ORTHO05D005299 2.4e-34 148.3 74 98.6
Phvul.004G148400 Phaseolus vulgaris HOM05D008500 ORTHO05D005299 3.3e-20 101.3 74 70.3
VMungo0464G1302 Vigna mungo HOM05D008500 ORTHO05D005299 2.1e-19 98.6 72 70.8
Glyma.07G104300 Glycine max HOM05D008500 ORTHO05D005299 3.1e-18 94.7 66 74.2
Glyma.09G173300 Glycine max HOM05D008500 ORTHO05D005299 9.0e-18 93.2 69 71.0
Lalb_Chr16g0386911 Lupinus albus HOM05D008500 ORTHO05D005299 9.0e-18 93.2 73 65.8
TPR.G18382 Trifolium pratense HOM05D008500 ORTHO05D005299 4.5e-17 90.9 71 73.2
RcHm_v2.0_Chr7g0178031 Rosa chinensis HOM05D008500 ORTHO05D005299 2.9e-16 88.2 67 73.1
Lalb_Chr05g0221531 Lupinus albus HOM05D008500 ORTHO05D005299 1.4e-15 85.9 69 62.3
FvH4_5g17640 Fragaria vesca HOM05D008500 ORTHO05D005299 2.4e-15 85.1 67 71.6
FAN04G2293 Fragaria x ananassa HOM05D008500 ORTHO05D005299 2.4e-15 85.1 67 71.6
FAN08G2086 Fragaria x ananassa HOM05D008500 ORTHO05D005299 2.4e-15 85.1 67 71.6
FAN18G0107 Fragaria x ananassa HOM05D008500 ORTHO05D005299 2.4e-15 85.1 67 71.6
Sabra15G0028800 Salix brachista HOM05D008500 ORTHO05D005299 7.1e-15 83.6 65 66.2
Medtr6g071040 Medicago truncatula HOM05D008500 ORTHO05D005299 1.6e-14 82.4 63 73.0
FAN13G1653 Fragaria x ananassa HOM05D008500 ORTHO05D005299 2.1e-14 82.0 67 70.1
Psat1g030680 Pisum sativum HOM05D008500 ORTHO05D005299 2.1e-14 82.0 71 67.6
Potri.012G044001 Populus trichocarpa HOM05D008500 ORTHO05D005299 2.7e-14 81.6 71 62.0
PGR044G0774 Punica granatum HOM05D008500 ORTHO05D005299 1.0e-13 79.7 58 67.2
Thecc.03G061000 Theobroma cacao HOM05D008500 ORTHO05D005299 1.0e-13 79.7 77 62.3
Sabra12G0030900 Salix brachista HOM05D008500 ORTHO05D005299 1.3e-13 79.3 62 61.3
CiPaw.15G146300 Carya illinoinensis HOM05D008500 ORTHO05D005299 3.0e-13 78.2 62 67.7
Manes.06G003500 Manihot esculenta HOM05D008500 ORTHO05D005299 3.9e-13 77.8 76 57.9
Potri.015G034800 Populus trichocarpa HOM05D008500 ORTHO05D005299 3.9e-13 77.8 63 63.5
Haze_18904 Corylus avellana HOM05D008500 ORTHO05D005299 5.1e-13 77.4 63 63.5
Haze_18910 Corylus avellana HOM05D008500 ORTHO05D005299 5.1e-13 77.4 63 63.5
Lalb_Chr14g0370691 Lupinus albus HOM05D008500 ORTHO05D005299 6.7e-13 77.0 74 64.9
QL10p031374 Quercus lobata HOM05D008500 ORTHO05D005299 6.7e-13 77.0 49 83.7
Sed0027993 Sechium edule HOM05D008500 ORTHO05D005299 1.5e-12 75.9 57 66.7
Duzib205G0189 Durio zibethinus HOM05D008500 ORTHO05D005299 9.6e-12 73.2 56 71.4
Cpa.g.sc3.366 Carica papaya HOM05D008500 ORTHO05D005299 1.3e-11 72.8 66 60.6
Cfa020630 Carpinus fangiana HOM05D008500 ORTHO05D005299 1.3e-11 72.8 57 70.2
Gohir.A12G270500 Gossypium hirsutum HOM05D008500 ORTHO05D005299 1.3e-11 72.8 76 61.8
MELO3C002147.2 Cucumis melo HOM05D008500 ORTHO05D005299 1.6e-11 72.4 57 70.2
ClCG04G010470 Citrullus lanatus HOM05D008500 ORTHO05D005299 2.1e-11 72.0 57 70.2
Gohir.D12G270900 Gossypium hirsutum HOM05D008500 ORTHO05D005299 2.8e-11 71.6 72 63.9
Manes.14G157100 Manihot esculenta HOM05D008500 ORTHO05D005299 2.8e-11 71.6 76 51.3
Prupe.5G236200 Prunus persica HOM05D008500 ORTHO05D005299 8.1e-11 70.1 70 62.9
Gorai.008G291300 Gossypium raimondii HOM05D008500 ORTHO05D005299 1.1e-10 69.7 72 62.5
CsaV3_1G007310 Cucumis sativus L. HOM05D008500 ORTHO05D005299 1.4e-10 69.3 55 69.1
Nn4g24351 Nelumbo nucifera HOM05D008500 ORTHO05D005299 1.8e-10 68.9 67 59.7
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 1.8e-10 68.9 58 70.7
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 6.9e-10 67.0 72 56.9
MBI19_g22070_MAGBIO Magnolia biondii HOM05D008500 ORTHO05D005299 6.9e-10 67.0 76 55.3
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 1.2e-09 66.2 68 63.2
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.2e-09 66.2 60 66.7
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.2e-09 66.2 60 66.7
Eucgr.K02282 Eucalyptus grandis HOM05D008500 ORTHO05D005299 2.0e-09 65.5 75 54.7
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 3.4e-09 64.7 68 60.3
Nn3g18353 Nelumbo nucifera HOM05D008500 ORTHO05D005299 3.4e-09 64.7 57 66.7
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 4.5e-09 64.3 73 53.4
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 1.0e-08 63.2 73 53.4
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.3e-08 62.8 83 50.6
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.3e-08 62.8 83 50.6
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.3e-08 62.8 83 50.6
Lalb_Chr24g0398121 Lupinus albus HOM05D008500 ORTHO05D005299 1.3e-08 62.8 63 58.7
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 2.9e-08 61.6 66 59.1
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 2.9e-08 61.6 60 61.7
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 2.9e-08 61.6 58 63.8
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 9.3e-07 56.6 69 49.3
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 1.2e-06 56.2 65 55.4
Sed0007445 Sechium edule HOM05D008500 ORTHO05D005299 1.2e-06 56.2 72 50.0
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 2.1e-06 55.5 76 48.7
Aa31LG7G9440 Aethionema arabicum HOM05D007313 ORTHO05D005299 2.7e-06 55.1 73 56.2
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 2.7e-06 55.1 79 50.6
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 3.5e-06 54.7 77 49.4
ECA233G5799 Erigeron canadensis HOM05D007313 ORTHO05D005299 4.6e-06 54.3 56 60.7
Nitab4.5_0010904g0010 Nicotiana tabacum HOM05D013191 ORTHO05D015720 4.6e-06 54.3 60 56.7
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 4.6e-06 54.3 74 51.4
Lsat_1_v5_gn_4_12541 Lactuca sativa HOM05D007313 ORTHO05D005299 7.9e-06 53.5 63 54.0


User provided reference genes

Program Settings