Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 5.7e-124 447.6 226 100.0
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.4e-122 443.0 226 99.1
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 5.0e-51 205.3 257 52.9
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 1.8e-48 196.8 257 51.8
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 3.0e-48 196.1 258 52.7
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 5.3e-45 185.3 256 51.6
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 1.1e-42 177.6 254 46.9
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 4.6e-41 172.2 273 47.6
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 7.4e-39 164.9 267 43.8
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 4.8e-38 162.2 256 46.1
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 6.9e-37 158.3 255 46.3
arahy.Tifrunner.gnm1.ann1.GMZ10Y Arachis hypogaea HOM05D059322 ORTHO05D007787 4.0e-24 115.9 182 46.7
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 5.2e-24 115.5 276 37.7
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.3e-22 110.9 268 38.4
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 7.0e-21 105.1 257 35.8
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 7.0e-21 105.1 260 35.8
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.6e-20 104.0 240 37.1
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 2.0e-20 103.6 269 37.5
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 7.7e-20 101.7 253 36.8
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 7.7e-20 101.7 264 34.5
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 5.0e-19 99.0 263 31.9
Lalb_Chr06g0164231 Lupinus albus HOM05D006494 ORTHO05D007787 3.2e-18 96.3 93 53.8
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 7.2e-18 95.1 245 34.7
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 7.2e-18 95.1 243 37.0
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 7.2e-18 95.1 258 36.4
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 2.7e-17 93.2 261 33.7
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.7e-17 92.4 256 34.8
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 8.0e-17 91.7 265 36.2
arahy.Tifrunner.gnm1.ann1.Q03G4Y Arachis hypogaea HOM05D059322 ORTHO05D007787 3.0e-16 89.7 191 43.5
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 3.0e-16 89.7 248 35.1
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 2.0e-15 87.0 252 36.1
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.6e-15 86.7 256 34.8
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 3.4e-15 86.3 260 32.3
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.4e-15 85.9 266 32.0
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.4e-15 85.9 265 30.9
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 5.7e-15 85.5 245 34.7
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.5e-15 85.1 253 34.0
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 9.8e-15 84.7 228 33.8
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 9.8e-15 84.7 244 32.4
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.3e-14 84.3 253 34.8
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.7e-14 84.0 265 31.3
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 2.2e-14 83.6 248 31.5
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.2e-14 83.6 253 33.2
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.8e-14 83.2 246 33.3
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 8.3e-14 81.6 253 32.8
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 2.4e-13 80.1 256 31.6
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 3.1e-13 79.7 246 31.3
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 7.0e-13 78.6 244 33.2
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.0e-13 78.6 206 37.4
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 7.0e-13 78.6 248 35.9
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.1e-13 78.2 216 31.0
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 9.1e-13 78.2 240 35.8
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 9.1e-13 78.2 259 33.6
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.0e-12 77.0 203 33.5
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 2.0e-12 77.0 218 32.1
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.7e-12 76.6 262 35.1
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 4.5e-12 75.9 175 33.1
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 5.9e-12 75.5 249 32.5
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.7e-12 75.1 153 35.3
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 7.7e-12 75.1 209 32.1
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.0e-11 74.7 262 34.4
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 1.7e-11 73.9 246 35.0
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 1.7e-11 73.9 272 33.5
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 2.9e-11 73.2 257 31.5
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 2.9e-11 73.2 262 31.7
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 6.5e-11 72.0 239 31.4
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 6.5e-11 72.0 238 31.9
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 6.5e-11 72.0 228 31.6
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.1e-10 71.2 239 30.5
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 1.1e-10 71.2 195 30.8
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 1.5e-10 70.9 239 30.1
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.5e-10 70.9 241 30.3
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.5e-10 70.1 264 31.8
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.5e-10 70.1 261 33.0
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.2e-10 69.3 225 32.4
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 5.5e-10 68.9 208 32.7
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.6e-09 67.4 245 31.0
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.6e-09 67.4 245 31.0
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.7e-09 66.6 237 30.8
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.7e-09 66.6 239 29.7
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 6.1e-09 65.5 207 35.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 8.0e-09 65.1 226 31.0
arahy.Tifrunner.gnm1.ann1.P4DBMR Arachis hypogaea HOM05D062081 ORTHO05D007787 1.4e-08 64.3 162 38.3
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.8e-08 63.9 192 31.2
arahy.Tifrunner.gnm1.ann1.78PZ7R Arachis hypogaea HOM05D062081 ORTHO05D007787 3.0e-08 63.2 139 41.0
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 4.0e-08 62.8 190 33.7
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 4.0e-08 62.8 190 33.7
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.8e-08 61.6 246 30.1
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 8.8e-08 61.6 222 28.8
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.5e-07 60.8 246 29.7
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 2.0e-07 60.5 198 30.8
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 2.0e-07 60.5 255 31.0
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.6e-07 60.1 227 29.5
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.4e-07 59.3 173 35.3
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.2e-06 57.0 245 31.4


User provided reference genes

Program Settings