Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.9e-189 665.6 327 100.0
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.5e-184 648.7 325 97.5
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 5.7e-173 610.9 327 93.3
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.7e-172 608.2 327 93.3
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 2.0e-117 426.4 327 68.2
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 9.8e-117 424.1 328 68.0
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 6.0e-114 414.8 327 66.1
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 2.3e-113 412.9 331 65.6
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 2.5e-112 409.5 328 67.1
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 2.3e-110 402.9 331 65.6
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 4.4e-109 398.7 332 65.1
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 2.2e-108 396.4 326 66.9
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 4.4e-93 345.5 255 67.8
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 1.7e-92 343.6 330 55.5
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 4.2e-91 339.0 331 57.4
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 7.1e-91 338.2 247 67.2
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 1.2e-90 337.4 247 66.8
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 6.0e-90 335.1 327 55.7
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 2.3e-89 333.2 244 66.8
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.3e-89 333.2 328 55.8
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 3.0e-89 332.8 328 55.5
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 3.0e-89 332.8 333 56.8
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 3.9e-89 332.4 246 67.5
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 8.7e-89 331.3 337 54.3
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.1e-88 330.9 328 55.2
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.5e-88 329.7 296 58.8
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 3.3e-88 329.3 332 55.4
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 7.3e-88 328.2 337 53.7
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 7.3e-88 328.2 329 55.3
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 7.3e-88 328.2 253 65.2
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 9.6e-88 327.8 250 64.0
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.6e-87 327.0 254 62.6
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.6e-87 327.0 327 53.2
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 2.1e-87 326.6 281 62.3
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 4.8e-87 325.5 283 60.1
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 4.8e-87 325.5 332 55.1
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 4.8e-87 325.5 253 64.4
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 4.8e-87 325.5 253 64.4
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 4.8e-87 325.5 330 54.5
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.1e-86 324.3 338 54.7
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.1e-86 324.3 327 52.3
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 2.4e-86 323.2 333 54.7
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 2.4e-86 323.2 257 63.4
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 3.1e-86 322.8 244 63.1
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 4.0e-86 322.4 333 52.9
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 9.0e-86 321.2 275 61.1
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.5e-85 320.5 250 64.0
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 2.0e-85 320.1 243 66.3
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 2.6e-85 319.7 336 54.2
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 5.8e-85 318.5 253 64.0
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 7.6e-85 318.2 243 63.4
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.3e-84 317.4 335 53.1
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.9e-84 316.2 327 55.4
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 3.8e-84 315.8 246 64.2
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 8.4e-84 314.7 246 62.6
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-83 314.3 229 68.1
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 1.4e-83 313.9 329 54.1
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 3.2e-83 312.8 281 58.0
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 3.2e-83 312.8 249 61.4
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 4.2e-83 312.4 244 64.3
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 9.3e-83 311.2 329 53.2
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 1.6e-82 310.5 271 60.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.5e-82 309.3 317 53.3
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 6.0e-82 308.5 332 52.1
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 6.0e-82 308.5 297 54.5
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 1.0e-81 307.8 251 60.2
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 2.3e-81 306.6 333 49.8
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.1e-80 304.3 276 57.6
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.1e-80 304.3 242 64.0
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.5e-80 303.9 245 60.0
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.9e-80 303.5 331 50.2
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.9e-80 303.5 331 50.2
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 2.5e-80 303.1 294 53.7
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.3e-80 302.8 254 61.8
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 4.3e-80 302.4 265 58.5
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 9.6e-80 301.2 254 61.4
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.3e-79 300.8 240 60.4
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 2.1e-79 300.1 247 62.8
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 2.8e-79 299.7 278 54.7
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 3.6e-79 299.3 244 60.7
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 3.6e-79 299.3 276 54.7
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 6.2e-79 298.5 278 54.7
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 8.1e-79 298.1 254 61.0
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.4e-78 297.4 251 59.0
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 4.0e-78 295.8 267 56.6
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 3.4e-77 292.7 262 56.9
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 4.9e-76 288.9 238 60.1
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 1.4e-75 287.3 276 53.6
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 6.0e-74 282.0 256 53.9
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.0e-73 281.2 391 43.7
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 3.0e-73 279.6 222 64.4
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 2.5e-72 276.6 290 57.2
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.8e-71 273.1 254 56.3
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 6.2e-71 271.9 297 48.8
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 1.4e-70 270.8 248 54.0
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 2.6e-69 266.5 214 64.5
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 3.4e-69 266.2 225 57.8
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.1e-67 261.2 331 47.7
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.5e-64 250.8 245 49.8
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.2e-59 232.6 230 50.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 4.3e-56 222.6 169 64.5
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.0e-49 201.4 249 46.6
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 3.3e-48 196.4 249 43.4
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 4.3e-48 196.1 138 71.0
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.7e-47 193.0 161 60.2
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 5.3e-46 189.1 147 67.3
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 9.1e-46 188.3 243 42.8
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 9.4e-43 178.3 254 44.1
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.2e-42 177.9 265 40.8
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 4.7e-42 176.0 245 42.4
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.8e-41 171.8 142 60.6
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.1e-40 171.4 139 60.4
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.0e-40 170.6 143 59.4
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.6e-40 170.2 147 63.3
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 4.8e-39 166.0 159 50.3
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 6.5e-36 155.6 205 48.8
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.7e-31 141.0 115 62.6
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.7e-31 141.0 108 63.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.8e-30 137.5 199 42.7
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.0e-29 134.0 125 51.2
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 7.7e-29 132.1 110 59.1
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 2.0e-24 117.5 180 41.7
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.0e-17 93.6 64 73.4
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 9.8e-16 88.6 79 62.0
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.1e-10 70.9 78 50.0


User provided reference genes

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