Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 2.4e-102 375.6 198 100.0
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.3e-84 316.6 187 92.0
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.0e-55 220.7 192 65.1
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 2.5e-54 216.1 211 61.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 6.7e-52 208.0 172 68.0
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 8.7e-52 207.6 164 69.5
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 4.8e-50 201.8 169 66.9
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 6.3e-50 201.4 163 66.9
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.1e-49 200.7 163 68.1
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 2.6e-48 196.1 159 66.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 2.2e-47 193.0 155 69.0
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 2.0e-40 169.9 143 64.3
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.1e-33 146.0 179 52.5
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 1.2e-32 144.1 154 53.9
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 1.6e-32 143.7 155 53.5
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 3.5e-32 142.5 171 50.3
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 7.7e-32 141.4 169 52.7
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 1.0e-31 141.0 156 52.6
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 1.3e-31 140.6 180 48.9
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.2e-31 139.8 173 48.0
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 2.2e-31 139.8 166 52.4
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 6.5e-31 138.3 155 52.9
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 8.5e-31 137.9 162 49.4
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 8.5e-31 137.9 167 50.3
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.9e-30 136.7 176 44.9
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 5.5e-30 135.2 176 44.3
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 5.5e-30 135.2 176 44.3
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 5.5e-30 135.2 159 51.6
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.1e-29 133.3 166 48.2
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.1e-29 133.3 175 46.9
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.7e-29 132.9 175 49.1
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.7e-29 132.9 175 49.1
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.4e-28 130.6 159 50.9
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.4e-28 130.6 178 47.8
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.8e-28 130.2 174 47.1
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.8e-28 130.2 170 47.1
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 2.3e-28 129.8 170 46.5
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 5.2e-28 128.6 159 45.9
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 6.7e-28 128.3 138 50.7
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 6.7e-28 128.3 171 48.0
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.5e-27 127.1 159 50.9
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 3.3e-27 125.9 160 48.1
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 9.7e-27 124.4 164 47.0
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 3.7e-26 122.5 177 44.6
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 4.8e-26 122.1 174 45.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 8.2e-26 121.3 146 54.1
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.8e-25 120.2 159 46.5
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.2e-24 117.5 149 46.3
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 3.5e-24 115.9 174 44.3
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 3.8e-23 112.5 145 46.2
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 2.5e-22 109.8 148 45.9
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 4.2e-22 109.0 149 46.3
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 4.2e-22 109.0 148 45.3
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 5.5e-22 108.6 171 39.8
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 1.0e-20 104.4 129 50.4
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.4e-20 104.0 143 45.5
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.4e-20 104.0 143 45.5
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.8e-20 103.6 143 44.8
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.8e-20 103.6 143 44.8
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.8e-20 103.6 150 42.7
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 2.3e-20 103.2 147 45.6
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 3.0e-20 102.8 148 43.9
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 4.0e-20 102.4 151 43.0
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.2e-19 100.9 147 45.6
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 1.2e-19 100.9 147 43.5
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 1.2e-19 100.9 147 43.5
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.2e-19 100.9 160 44.4
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-19 100.1 147 44.9
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 2.0e-19 100.1 163 41.7
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.6e-19 99.8 145 41.4
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 4.4e-19 99.0 151 41.1
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 7.5e-19 98.2 162 40.7
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.7e-18 97.1 156 39.7
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 1.7e-18 97.1 152 43.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 2.2e-18 96.7 154 39.6
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 2.8e-18 96.3 138 41.3
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 3.7e-18 95.9 149 45.6
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 3.7e-18 95.9 183 32.8
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 4.8e-18 95.5 129 45.0
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.4e-17 94.0 153 40.5
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 4.1e-17 92.4 153 39.2
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 4.1e-17 92.4 138 44.2
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 9.1e-17 91.3 97 52.6
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 2.0e-16 90.1 163 42.3
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 7.7e-16 88.2 164 37.2
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.3e-15 87.4 141 38.3
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.3e-15 87.4 153 37.9
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.7e-15 87.0 169 36.7
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.7e-15 87.0 99 52.5
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.7e-15 87.0 162 38.9
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 2.2e-15 86.7 150 42.7
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 2.9e-15 86.3 145 39.3
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 3.8e-15 85.9 149 38.9
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 6.5e-15 85.1 153 40.5
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 6.5e-15 85.1 147 40.8
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 2.1e-13 80.1 156 36.5
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 2.7e-13 79.7 172 32.0
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 3.6e-13 79.3 175 36.0
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 3.6e-13 79.3 175 36.0
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.0e-12 77.8 177 35.6
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.3e-12 76.6 171 35.7
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 4.0e-12 75.9 168 32.7
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 5.2e-12 75.5 126 38.9
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 5.2e-12 75.5 152 34.2
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 8.8e-12 74.7 150 37.3
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 5.7e-11 72.0 152 33.6
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 2.2e-10 70.1 168 36.9
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.7e-10 69.3 117 39.3
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 4.9e-10 68.9 132 34.8
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 6.3e-10 68.6 136 35.3
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 6.3e-10 68.6 135 34.1
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 7.0e-09 65.1 75 46.7
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 7.7e-08 61.6 38 68.4
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 1.0e-07 61.2 141 35.5
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 1.3e-07 60.8 166 32.5
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 1.7e-07 60.5 39 66.7
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 2.9e-07 59.7 136 33.8
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 3.8e-07 59.3 69 47.8
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 4.3e-06 55.8 136 33.1
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 9.5e-06 54.7 32 68.8


User provided reference genes

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