Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 7.5e-178 627.1 321 100.0
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 6.6e-174 614.0 321 97.8
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 4.3e-141 505.0 319 79.6
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 1.6e-140 503.1 326 81.0
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 3.6e-140 501.9 326 80.7
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 7.6e-138 494.2 320 78.8
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 8.4e-137 490.7 320 78.1
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 8.4e-137 490.7 320 77.2
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 2.4e-136 489.2 319 77.7
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 1.0e-134 483.8 320 77.2
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 6.6e-134 481.1 321 77.3
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 2.8e-132 475.7 320 76.6
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 5.3e-131 471.5 320 75.9
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 1.9e-128 463.0 319 71.5
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 2.7e-127 459.1 319 72.4
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 3.7e-124 448.7 319 72.4
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.1e-123 447.2 319 69.6
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 4.0e-123 445.3 319 69.9
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 2.6e-122 442.6 319 72.1
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 2.5e-120 436.0 320 68.8
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 9.3e-120 434.1 319 69.3
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 1.2e-119 433.7 319 69.6
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 1.2e-119 433.7 319 71.2
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 2.7e-119 432.6 319 69.9
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 1.3e-118 430.3 319 68.7
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 1.8e-118 429.9 319 69.3
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 3.9e-118 428.7 319 68.7
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 5.1e-118 428.3 319 68.7
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 6.7e-118 427.9 319 68.3
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 8.7e-118 427.6 321 70.4
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 8.7e-118 427.6 321 70.4
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 8.7e-118 427.6 319 68.7
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 4.3e-117 425.2 319 69.0
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 4.3e-117 425.2 320 69.4
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 1.3e-116 423.7 319 66.1
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 8.2e-116 421.0 320 67.8
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 4.0e-115 418.7 319 66.8
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 9.0e-115 417.5 319 67.1
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 1.5e-114 416.8 319 67.1
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 2.6e-114 416.0 328 66.5
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 4.5e-114 415.2 328 66.5
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.7e-113 413.3 319 67.4
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 1.7e-113 413.3 319 66.1
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 1.1e-112 410.6 315 66.3
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 2.5e-112 409.5 319 65.2
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 5.5e-112 408.3 318 64.5
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 2.7e-111 406.0 319 65.8
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 2.7e-111 406.0 318 65.7
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 4.6e-111 405.2 318 65.1
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 7.9e-111 404.4 319 64.9
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 1.3e-110 403.7 319 64.3
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 1.8e-110 403.3 319 64.6
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 1.1e-109 400.6 318 64.8
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 1.9e-109 399.8 319 64.3
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 2.5e-109 399.4 318 64.8
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 7.4e-109 397.9 319 64.3
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 4.8e-108 395.2 320 64.4
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 1.1e-107 394.0 319 65.5
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 2.4e-107 392.9 322 64.0
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 5.3e-107 391.7 320 63.1
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 5.3e-107 391.7 319 63.3
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 2.0e-106 389.8 318 62.9
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 1.0e-105 387.5 322 62.1
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 1.0e-105 387.5 320 63.8
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.2e-105 386.3 319 64.3
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 3.8e-105 385.6 321 61.4
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 3.8e-105 385.6 321 61.4
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 5.0e-105 385.2 305 64.6
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.5e-105 384.8 319 63.9
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.5e-105 384.8 319 63.9
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.5e-105 384.8 319 63.9
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 1.1e-104 384.0 322 61.5
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 1.4e-104 383.6 321 63.2
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 2.5e-104 382.9 317 62.5
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.2e-104 382.5 319 63.6
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 5.5e-104 381.7 322 63.0
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 9.4e-104 380.9 320 62.5
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 1.6e-103 380.2 322 61.8
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 1.6e-103 380.2 322 61.2
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 2.1e-103 379.8 322 60.9
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 3.0e-102 375.9 318 62.3
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 3.0e-102 375.9 318 62.3
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 6.7e-102 374.8 318 62.3
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 8.8e-102 374.4 320 61.2
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 1.7e-100 370.2 328 60.4
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 2.2e-100 369.8 321 61.1
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 2.8e-100 369.4 322 59.9
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 4.8e-100 368.6 320 62.2
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 6.9e-99 364.8 322 59.9
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 4.5e-98 362.1 288 66.3
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 1.3e-97 360.5 320 59.1
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 3.8e-97 359.0 321 60.7
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 4.2e-96 355.5 291 63.6
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 7.2e-96 354.8 309 60.2
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 9.4e-96 354.4 326 59.2
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 3.6e-95 352.4 299 62.2
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 3.9e-94 349.0 321 56.1
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 1.1e-93 347.4 320 57.5
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 3.3e-93 345.9 324 56.5
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 9.7e-93 344.4 323 55.1
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 1.1e-91 340.9 314 56.7
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 7.7e-90 334.7 320 55.0
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 1.3e-89 334.0 323 56.7
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 5.0e-89 332.0 314 56.1
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 6.7e-86 321.6 310 56.8
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 3.1e-83 312.8 346 52.0
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 9.4e-80 301.2 327 52.0
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 9.4e-80 301.2 318 47.5
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 2.1e-79 300.1 326 49.7
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 8.0e-79 298.1 200 77.5
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 2.0e-77 293.5 229 70.3
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 9.7e-77 291.2 262 61.8
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 5.0e-73 278.9 199 68.3
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 2.8e-68 263.1 176 77.8
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 3.0e-62 243.0 198 62.1
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 4.0e-62 242.7 323 45.5
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 2.8e-60 236.5 206 60.2
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 3.5e-58 229.6 247 51.4
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 8.6e-57 224.9 320 41.9
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 7.3e-56 221.9 326 39.6
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 9.5e-56 221.5 306 45.1
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 1.6e-55 220.7 306 44.8
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 8.0e-55 218.4 339 40.7
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 5.4e-51 205.7 144 75.7
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 5.6e-48 195.7 322 35.1
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 3.2e-43 179.9 118 78.0
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 2.9e-36 156.8 166 56.6
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 3.7e-36 156.4 111 73.0
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 4.6e-34 149.4 197 48.7
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.6e-32 142.5 104 65.4
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 3.4e-29 133.3 88 77.3
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 7.6e-29 132.1 117 55.6
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.9e-28 130.2 103 61.2
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 8.4e-28 128.6 222 36.9
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 2.4e-27 127.1 96 63.5
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 2.7e-26 123.6 90 72.2
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 2.5e-24 117.1 114 53.5
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 2.3e-17 94.0 339 26.3
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 6.9e-14 82.4 125 40.8
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 4.5e-13 79.7 413 23.7
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.2e-10 71.6 44 70.5
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 7.9e-10 68.9 125 39.2
BcaC07g40074 Brassica carinata HOM05D001925 ORTHO05D005701 9.6e-08 62.0 84 46.4


User provided reference genes

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