Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IR2XKV Arachis hypogaea HOM05D004241 ORTHO05D006031 7.8e-95 350.5 184 100.0
arahy.Tifrunner.gnm1.ann1.Z8S8NK Arachis hypogaea HOM05D004241 ORTHO05D006031 8.9e-83 310.5 214 80.8
arahy.Tifrunner.gnm1.ann1.8A66NB Arachis hypogaea HOM05D004241 ORTHO05D006031 1.1e-61 240.4 308 51.6
Glyma.07G152300 Glycine max HOM05D004241 ORTHO05D006031 2.9e-57 225.7 310 48.7
TPR.G35446 Trifolium pratense HOM05D004241 ORTHO05D006031 4.9e-57 224.9 311 48.9
Lj1g0026131 Lotus japonicus HOM05D004241 ORTHO05D006031 8.4e-57 224.2 312 48.4
VMungo1383G0980 Vigna mungo HOM05D004241 ORTHO05D006031 1.1e-56 223.8 310 48.1
Glyma.18G203400 Glycine max HOM05D004241 ORTHO05D006031 1.9e-56 223.0 310 48.4
Phvul.008G096500 Phaseolus vulgaris HOM05D004241 ORTHO05D006031 1.9e-56 223.0 310 48.1
Ca_07660_v3 Cicer arietinum L. HOM05D004241 ORTHO05D006031 1.7e-54 216.5 312 47.1
Sc07g0006700 Simmondsia chinensis HOM05D004241 ORTHO05D006031 1.9e-53 213.0 285 47.7
Lalb_Chr19g0124421 Lupinus albus HOM05D004241 ORTHO05D006031 3.3e-53 212.2 313 47.0
Gohir.A04G092900 Gossypium hirsutum HOM05D004241 ORTHO05D006031 4.3e-53 211.8 280 48.2
Eucgr.A00535 Eucalyptus grandis HOM05D004241 ORTHO05D006031 5.6e-53 211.5 278 48.2
CSS0018345 Camellia sinensis var. sinensis HOM05D004241 ORTHO05D006031 1.6e-52 209.9 288 47.2
ClCG04G006920 Citrullus lanatus HOM05D004241 ORTHO05D006031 2.1e-52 209.5 299 46.8
MELO3C026000.2 Cucumis melo HOM05D004241 ORTHO05D006031 2.1e-52 209.5 306 47.4
Gohir.D04G132200 Gossypium hirsutum HOM05D004241 ORTHO05D006031 2.1e-52 209.5 278 48.2
Medtr7g069210 Medicago truncatula HOM05D004241 ORTHO05D006031 2.1e-52 209.5 309 46.9
Gorai.012G116000 Gossypium raimondii HOM05D004241 ORTHO05D006031 2.8e-52 209.1 279 48.0
MD00G1061800 Malus domestica HOM05D004241 ORTHO05D006031 3.6e-52 208.8 308 45.8
Manes.09G106900 Manihot esculenta HOM05D004241 ORTHO05D006031 4.8e-52 208.4 288 47.6
Psat3g126440 Pisum sativum HOM05D004241 ORTHO05D006031 4.8e-52 208.4 313 46.0
Duzib128G1618 Durio zibethinus HOM05D004241 ORTHO05D006031 3.1e-51 205.7 288 46.2
Thecc.05G012600 Theobroma cacao HOM05D004241 ORTHO05D006031 3.1e-51 205.7 278 47.5
TAR633G2528 Trochodendron aralioides HOM05D004241 ORTHO05D006031 3.1e-51 205.7 308 44.5
CiPaw.09G211300 Carya illinoinensis HOM05D004241 ORTHO05D006031 4.0e-51 205.3 312 46.2
Prupe.6G280100 Prunus persica HOM05D004241 ORTHO05D006031 9.0e-51 204.1 308 45.8
Atru.chr8.2269 Acer truncatum HOM05D004241 ORTHO05D006031 2.6e-50 202.6 319 45.1
CANSAT35G0589 Cannabis sativa HOM05D004241 ORTHO05D006031 2.6e-50 202.6 297 46.8
Nn2g10892 Nelumbo nucifera HOM05D004241 ORTHO05D006031 2.6e-50 202.6 278 46.8
QL07p035079 Quercus lobata HOM05D004241 ORTHO05D006031 2.6e-50 202.6 288 46.2
RcHm_v2.0_Chr3g0462631 Rosa chinensis HOM05D004241 ORTHO05D006031 2.6e-50 202.6 290 46.9
Dinv13159 Davidia involucrata HOM05D004241 ORTHO05D006031 4.5e-50 201.8 310 45.2
THA.LOC104805975 Tarenaya hassleriana HOM05D004241 ORTHO05D006031 4.5e-50 201.8 300 46.3
PGR031G0770 Punica granatum HOM05D004241 ORTHO05D006031 5.8e-50 201.4 297 46.1
Ciclev10011985m.g Citrus clementina HOM05D004241 ORTHO05D006031 9.9e-50 200.7 294 45.6
CsaV3_4G026340 Cucumis sativus L. HOM05D004241 ORTHO05D006031 9.9e-50 200.7 310 45.2
GSVIVG01011187001 Vitis vinifera HOM05D004241 ORTHO05D006031 9.9e-50 200.7 304 46.1
FAN02G4369 Fragaria x ananassa HOM05D004241 ORTHO05D006031 1.3e-49 200.3 279 47.0
Hund14874 Selenicereus undatus HOM05D004241 ORTHO05D006031 1.3e-49 200.3 289 45.3
CiPaw.10G157700 Carya illinoinensis HOM05D004241 ORTHO05D006031 1.7e-49 199.9 307 44.6
Sed0025380 Sechium edule HOM05D004241 ORTHO05D006031 2.2e-49 199.5 309 46.0
TAR636G3470 Trochodendron aralioides HOM05D004241 ORTHO05D006031 2.9e-49 199.1 312 45.5
FvH4_6g11190 Fragaria vesca HOM05D004241 ORTHO05D006031 3.8e-49 198.7 279 47.0
FAN09G0733 Fragaria x ananassa HOM05D004241 ORTHO05D006031 4.9e-49 198.4 279 46.6
Nn2g13169 Nelumbo nucifera HOM05D004241 ORTHO05D006031 4.9e-49 198.4 294 44.2
Sabra06G0078400 Salix brachista HOM05D004241 ORTHO05D006031 4.9e-49 198.4 293 46.8
AUR62030817 Chenopodium quinoa HOM05D004241 ORTHO05D006031 6.4e-49 198.0 278 45.3
Dinv05780 Davidia involucrata HOM05D004241 ORTHO05D006031 8.4e-49 197.6 307 43.3
TWI74G0606 Tripterygium wilfordii HOM05D004241 ORTHO05D006031 1.9e-48 196.4 309 45.6
Dinv04461 Davidia involucrata HOM05D004241 ORTHO05D006031 2.4e-48 196.1 306 43.5
CARHR161450 Cardamine hirsuta HOM05D004241 ORTHO05D006031 3.2e-48 195.7 287 46.0
Migut.J00141 Erythranthe guttata HOM05D004241 ORTHO05D006031 3.2e-48 195.7 299 42.5
Cc06_g01120 Coffea canephora HOM05D004241 ORTHO05D006031 4.2e-48 195.3 304 43.8
EL10Ac5g12540 Beta vulgaris HOM05D004241 ORTHO05D006031 5.4e-48 194.9 279 45.5
MD12G1171900 Malus domestica HOM05D004241 ORTHO05D006031 5.4e-48 194.9 296 44.6
Oeu017800.1 Olea europaea HOM05D004241 ORTHO05D006031 7.1e-48 194.5 308 41.9
COL.COLO4_03385 Corchorus olitorius HOM05D004241 ORTHO05D006031 9.3e-48 194.1 250 51.6
Potri.016G119400 Populus trichocarpa HOM05D004241 ORTHO05D006031 9.3e-48 194.1 290 45.2
HanXRQChr06g0182231 Helianthus annuus HOM05D004241 ORTHO05D006031 1.6e-47 193.4 299 44.1
Potri.006G102100 Populus trichocarpa HOM05D004241 ORTHO05D006031 1.6e-47 193.4 305 44.6
PGSC0003DMG400008481 Solanum tuberosum HOM05D004241 ORTHO05D006031 1.6e-47 193.4 285 43.9
Oeu038754.1 Olea europaea HOM05D004241 ORTHO05D006031 2.1e-47 193.0 308 40.9
Ah.12g058810 Amaranthus hybridus HOM05D004241 ORTHO05D006031 2.7e-47 192.6 286 44.4
Sopen09g007610 Solanum pennellii HOM05D004241 ORTHO05D006031 2.7e-47 192.6 285 43.5
Nitab4.5_0008676g0010 Nicotiana tabacum HOM05D004241 ORTHO05D006031 3.5e-47 192.2 303 43.6
AT3G51820 Arabidopsis thaliana HOM05D004241 ORTHO05D006031 6.0e-47 191.4 287 45.3
BcaB01g00474 Brassica carinata HOM05D004241 ORTHO05D006031 6.0e-47 191.4 307 44.3
BolC8t50320H Brassica oleracea HOM05D004241 ORTHO05D006031 6.0e-47 191.4 307 44.3
AL5G32280 Arabidopsis lyrata HOM05D004241 ORTHO05D006031 7.9e-47 191.0 296 44.3
A09p44970 Brassica napus HOM05D004241 ORTHO05D006031 1.3e-46 190.3 280 45.4
BraA09t39957Z Brassica rapa HOM05D004241 ORTHO05D006031 1.3e-46 190.3 280 45.4
Nitab4.5_0000261g0130 Nicotiana tabacum HOM05D004241 ORTHO05D006031 1.3e-46 190.3 299 43.8
BolC1t02821H Brassica oleracea HOM05D004241 ORTHO05D006031 1.8e-46 189.9 297 43.1
Hma1.2p1_0362F.1_g136490 Hydrangea macrophylla HOM05D004241 ORTHO05D006031 1.8e-46 189.9 308 43.2
Aa31LG10G9090 Aethionema arabicum HOM05D004241 ORTHO05D006031 2.3e-46 189.5 298 44.3
BraA01t02235Z Brassica rapa HOM05D004241 ORTHO05D006031 2.3e-46 189.5 274 45.3
Carub.0005s1817 Capsella rubella HOM05D004241 ORTHO05D006031 2.3e-46 189.5 295 44.4
DCAR_015394 Daucus carota HOM05D004241 ORTHO05D006031 2.3e-46 189.5 312 42.9
Lj3A950T42 Lonicera japonica HOM05D004241 ORTHO05D006031 2.3e-46 189.5 279 44.4
Aqoxy2G00847 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 3.0e-46 189.1 280 44.6
Duzib093G0784 Durio zibethinus HOM05D004241 ORTHO05D006031 3.9e-46 188.7 250 48.8
BcaNung00368 Brassica carinata HOM05D004241 ORTHO05D006031 5.1e-46 188.3 275 45.5
C08p27050 Brassica napus HOM05D004241 ORTHO05D006031 5.1e-46 188.3 280 45.0
ECA236G0379 Erigeron canadensis HOM05D000031 ORTHO05D006031 5.1e-46 188.3 293 44.4
Thhalv10010408m.g Eutrema salsugineum HOM05D004241 ORTHO05D006031 5.1e-46 188.3 296 43.6
Dinv01710 Davidia involucrata HOM05D004241 ORTHO05D006031 6.7e-46 188.0 307 42.3
BcaB01g00414 Brassica carinata HOM05D004241 ORTHO05D006031 8.7e-46 187.6 279 44.8
MSTRG.18996 Avicennia marina HOM05D004241 ORTHO05D006031 1.5e-45 186.8 297 41.4
BcaC09g50106 Brassica carinata HOM05D004241 ORTHO05D006031 1.5e-45 186.8 297 42.8
AUR62030480 Chenopodium quinoa HOM05D004241 ORTHO05D006031 1.5e-45 186.8 250 48.8
Sp5g10450 Schrenkiella parvula HOM05D004241 ORTHO05D006031 1.5e-45 186.8 296 43.6
Haze_21025 Corylus avellana HOM05D004241 ORTHO05D006031 1.9e-45 186.4 370 39.2
Actinidia05359 Actinidia chinensis HOM05D004241 ORTHO05D006031 4.3e-45 185.3 289 43.3
CAN.G283.14 Capsicum annuum HOM05D004241 ORTHO05D006031 4.3e-45 185.3 297 43.1
CDE04G1685 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 4.3e-45 185.3 283 42.8
ATR0681G392 Amborella trichopoda HOM05D004241 ORTHO05D006031 1.6e-44 183.3 281 43.4
unitig_578.g15901 Utricularia gibba HOM05D004241 ORTHO05D006031 6.2e-44 181.4 294 41.5
Rhsim04G0126500 Rhododendron simsii HOM05D004241 ORTHO05D006031 1.8e-43 179.9 275 44.4
MBI15_g19417_MAGBIO Magnolia biondii HOM05D004241 ORTHO05D006031 4.0e-43 178.7 323 39.6
PSO801G0614 Papaver somniferum HOM05D004241 ORTHO05D006031 5.3e-43 178.3 279 43.4
CDE08G0537 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 1.2e-42 177.2 283 41.0
Peaxi162Scf00890g00119 Petunia axillaris HOM05D004241 ORTHO05D006031 1.5e-42 176.8 296 41.2
SEGI_30165 Sequoiadendron giganteum HOM05D004241 ORTHO05D006031 1.5e-42 176.8 283 42.4
C01p28890 Brassica napus HOM05D003030 ORTHO05D006031 2.0e-42 176.4 323 39.9
A01p23250 Brassica napus HOM05D003030 ORTHO05D006031 4.5e-42 175.3 300 41.3
HPP92_013785 Vanilla planifolia HOM05D004241 ORTHO05D006031 1.0e-41 174.1 278 42.4
Os05g0349700 Oryza sativa ssp. japonica HOM05D004241 ORTHO05D006031 2.2e-41 172.9 282 43.6
PSO339G5814 Papaver somniferum HOM05D004241 ORTHO05D006031 3.8e-41 172.2 309 40.5
Lj2C71T11 Lonicera japonica HOM05D004241 ORTHO05D006031 1.1e-40 170.6 285 41.8
Sabra16G0115300 Salix brachista HOM05D004241 ORTHO05D006031 2.1e-39 166.4 273 42.1
Cpa.g.sc11.77 Carica papaya HOM05D004241 ORTHO05D006031 1.0e-38 164.1 265 43.8
arahy.Tifrunner.gnm1.ann1.XTCX6A Arachis hypogaea HOM05D004241 ORTHO05D006031 1.8e-38 163.3 161 63.4
Lsat_1_v5_gn_8_101501 Lactuca sativa HOM05D004241 ORTHO05D006031 7.4e-37 157.9 254 41.3
Mapoly0045s0080 Marchantia polymorpha HOM05D004241 ORTHO05D006031 7.4e-37 157.9 271 40.2
SMO271G0089 Selaginella moellendorffii HOM05D004241 ORTHO05D006031 3.7e-36 155.6 274 38.3
Glyma.16G098000 Glycine max HOM05D004241 ORTHO05D006031 2.4e-35 152.9 121 69.4
Cfa017182 Carpinus fangiana HOM05D004241 ORTHO05D006031 3.1e-35 152.5 124 66.1
arahy.Tifrunner.gnm1.ann1.F5Z0S5 Arachis hypogaea HOM05D004241 ORTHO05D006031 4.1e-35 152.1 316 38.0
PSO384G4055 Papaver somniferum HOM05D004241 ORTHO05D006031 4.1e-35 152.1 278 38.5
arahy.Tifrunner.gnm1.ann1.44A4XL Arachis hypogaea HOM05D004241 ORTHO05D026924 9.0e-35 151.0 130 66.9
PSO339G4053 Papaver somniferum HOM05D004241 ORTHO05D006031 1.2e-34 150.6 315 35.9
Solyc09g014760.4 Solanum lycopersicum HOM05D004241 ORTHO05D006031 1.5e-34 150.2 121 65.3
arahy.Tifrunner.gnm1.ann1.YJ5G8U Arachis hypogaea HOM05D004241 ORTHO05D006031 2.0e-34 149.8 318 38.4
FAN14G2181 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.0e-34 149.8 121 67.8
FAN05G3727 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.6e-34 149.4 121 66.9
Pp3c13_13830 Physcomitrium patens HOM05D004241 ORTHO05D006031 1.3e-33 147.1 273 38.1
Aqoxy4G02498 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 1.7e-33 146.7 280 38.6
vmacro08889 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 3.8e-33 145.6 121 64.5
AagrBONN_evm.TU.Sc2ySwM_228.1146 Anthoceros agrestis HOM05D004241 ORTHO05D006031 3.2e-32 142.5 309 36.6
FAN14G4537 Fragaria x ananassa HOM05D004241 ORTHO05D006031 3.9e-30 135.6 83 85.5
vmacro08890 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 1.3e-28 130.6 438 31.7
Cre06.g294750 Chlamydomonas reinhardtii HOM05D004241 ORTHO05D006031 1.0e-25 120.9 83 71.1
CBR_g38410 Chara braunii HOM05D004241 ORTHO05D006031 2.9e-25 119.4 70 82.9
MCO16G058 Micromonas commoda HOM05D004241 ORTHO05D006031 1.4e-24 117.1 83 69.9
arahy.Tifrunner.gnm1.ann1.12W07B Arachis hypogaea HOM05D004241 ORTHO05D001299 1.2e-23 114.0 112 61.6
CDE04G2983 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 7.9e-23 111.3 348 30.2
arahy.Tifrunner.gnm1.ann1.X8HB46 Arachis hypogaea HOM05D004241 ORTHO05D026893 1.5e-21 107.1 94 66.0
PRCOL_00003234 Prasinoderma coloniale HOM05D004241 ORTHO05D006031 4.8e-20 102.1 85 64.7
Cfa017183 Carpinus fangiana HOM05D004241 ORTHO05D006031 1.1e-19 100.9 115 56.5
FAN09G0084 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.0e-18 96.7 83 62.7
SalBow5G3053 Salvia bowleyana HOM05D004241 ORTHO05D006031 2.9e-17 92.8 313 29.1
A09p02030 Brassica napus HOM05D004241 ORTHO05D018769 8.5e-17 91.3 92 56.5
BraA07t28631Z Brassica rapa HOM05D004241 ORTHO05D018769 1.9e-16 90.1 90 56.7
BraA02t07759Z Brassica rapa HOM05D004241 ORTHO05D018769 5.5e-16 88.6 90 56.7
C04p53880 Brassica napus HOM05D004241 ORTHO05D018769 2.7e-15 86.3 47 89.4
C09p54590 Brassica napus HOM05D004241 ORTHO05D018769 2.7e-15 86.3 47 89.4
BolC1t02697H Brassica oleracea HOM05D004241 ORTHO05D018769 2.7e-15 86.3 47 89.4
C04p30330 Brassica napus HOM05D004241 ORTHO05D026893 1.1e-13 80.9 46 87.0
BolC4t24566H Brassica oleracea HOM05D004241 ORTHO05D026893 1.1e-13 80.9 46 87.0
Zm00001eb286140 Zea mays HOM05D004241 ORTHO05D006031 2.0e-13 80.1 91 52.7
arahy.Tifrunner.gnm1.ann1.DE57MX Arachis hypogaea HOM05D004241 ORTHO05D001299 1.7e-12 77.0 101 48.5
HPP92_013874 Vanilla planifolia HOM05D004241 ORTHO05D006031 6.3e-12 75.1 82 53.7
Rhsim04G0126400 Rhododendron simsii HOM05D004241 ORTHO05D006031 8.2e-12 74.7 55 70.9
arahy.Tifrunner.gnm1.ann1.I63G1M Arachis hypogaea HOM05D004241 ORTHO05D006031 1.2e-10 70.9 42 88.1
BcaC02g10323 Brassica carinata HOM05D004241 ORTHO05D026893 1.6e-10 70.5 42 85.7
A02p27320 Brassica napus HOM05D004241 ORTHO05D018769 2.6e-10 69.7 92 47.8
arahy.Tifrunner.gnm1.ann1.ZW8CA6 Arachis hypogaea HOM05D004241 ORTHO05D006031 3.5e-10 69.3 62 62.9
FAN05G0935 Fragaria x ananassa HOM05D004241 ORTHO05D026924 1.0e-09 67.8 49 73.5
FAN14G2483 Fragaria x ananassa HOM05D004241 ORTHO05D026924 3.8e-09 65.9 49 71.4
A09p61840 Brassica napus HOM05D004241 ORTHO05D018769 8.0e-07 58.2 72 51.4


User provided reference genes

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