Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8U8ZZM Arachis hypogaea HOM05D005280 ORTHO05D006253 1.3e-89 334.0 319 100.0
arahy.Tifrunner.gnm1.ann1.IM81E3 Arachis hypogaea HOM05D005280 ORTHO05D006253 1.3e-89 334.0 319 100.0
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 6.7e-78 295.0 257 90.3
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 1.5e-77 293.9 319 74.6
Glyma.13G229400 Glycine max HOM05D005280 ORTHO05D006253 9.7e-77 291.2 254 89.8
Phvul.006G175800 Phaseolus vulgaris HOM05D005280 ORTHO05D006253 1.7e-76 290.4 253 90.1
Ca_00439_v3 Cicer arietinum L. HOM05D005280 ORTHO05D006253 1.1e-75 287.7 253 89.7
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 5.3e-75 285.4 258 88.4
Medtr2g016160 Medicago truncatula HOM05D005280 ORTHO05D006253 9.1e-75 284.6 252 89.7
Potri.004G057600 Populus trichocarpa HOM05D005280 ORTHO05D006253 2.0e-74 283.5 251 89.6
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 7.7e-74 281.6 325 72.6
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 1.3e-73 280.8 319 72.7
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 2.9e-73 279.6 325 72.3
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 2.9e-73 279.6 257 85.6
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 3.8e-73 279.3 327 71.6
Psat1g197880 Pisum sativum HOM05D005280 ORTHO05D006253 5.0e-73 278.9 249 90.0
Manes.16G040400 Manihot esculenta HOM05D005280 ORTHO05D006253 2.5e-72 276.6 248 88.7
Dinv16775 Davidia involucrata HOM05D005280 ORTHO05D006253 4.2e-72 275.8 257 86.8
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 4.2e-72 275.8 258 86.0
Ciclev10015974m.g Citrus clementina HOM05D005280 ORTHO05D006253 1.2e-71 274.2 251 89.2
Cfa000612 Carpinus fangiana HOM05D005280 ORTHO05D006253 1.6e-71 273.9 256 85.9
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 1.6e-71 273.9 320 71.6
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 2.1e-71 273.5 257 85.6
Haze_06226 Corylus avellana HOM05D005280 ORTHO05D006253 4.7e-71 272.3 257 85.6
Sabra04G0037300 Salix brachista HOM05D005280 ORTHO05D006253 6.1e-71 271.9 248 88.3
Dinv40681 Davidia involucrata HOM05D005280 ORTHO05D006253 1.4e-70 270.8 251 88.0
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 1.8e-70 270.4 319 70.5
MELO3C007211.2 Cucumis melo HOM05D005280 ORTHO05D006253 3.9e-70 269.2 248 89.5
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 3.9e-70 269.2 257 84.8
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 3.9e-70 269.2 257 85.2
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 5.1e-70 268.9 257 84.8
CANSAT80G2107 Cannabis sativa HOM05D005280 ORTHO05D006253 6.7e-70 268.5 143 86.7
FAN11G1284 Fragaria x ananassa HOM05D005280 ORTHO05D006253 6.7e-70 268.5 254 85.8
VMungo0540G1202 Vigna mungo HOM05D005280 ORTHO05D006253 6.7e-70 268.5 143 87.4
FAN25G0161 Fragaria x ananassa HOM05D005280 ORTHO05D006253 8.8e-70 268.1 254 86.2
ClCG01G023770 Citrullus lanatus HOM05D005280 ORTHO05D006253 1.1e-69 267.7 248 89.1
CsaV3_6G050930 Cucumis sativus L. HOM05D005280 ORTHO05D006253 1.1e-69 267.7 248 89.1
RcHm_v2.0_Chr5g0010881 Rosa chinensis HOM05D005280 ORTHO05D006253 2.0e-69 266.9 255 86.3
Atru.chr10.1658 Acer truncatum HOM05D005280 ORTHO05D006253 2.6e-69 266.5 251 86.5
FvH4_3g07730 Fragaria vesca HOM05D005280 ORTHO05D006253 3.3e-69 266.2 254 85.8
FAN21G3704 Fragaria x ananassa HOM05D005280 ORTHO05D006253 3.3e-69 266.2 253 85.8
CiPaw.10G059400 Carya illinoinensis HOM05D005280 ORTHO05D006253 7.4e-69 265.0 253 85.4
Glyma.15G083100 Glycine max HOM05D005280 ORTHO05D006253 7.4e-69 265.0 143 86.0
THA.LOC104812639 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 2.2e-68 263.5 252 86.5
vmacro16064 Vaccinium macrocarpon HOM05D005280 ORTHO05D006253 3.7e-68 262.7 244 89.8
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 4.8e-68 262.3 258 82.6
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 6.3e-68 261.9 257 84.4
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 6.3e-68 261.9 257 84.0
Rhsim02G0143200 Rhododendron simsii HOM05D005280 ORTHO05D006253 8.2e-68 261.5 244 89.8
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 8.2e-68 261.5 257 84.0
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.1e-67 261.2 258 82.6
Lsat_1_v5_gn_7_24160 Lactuca sativa HOM05D005280 ORTHO05D006253 1.1e-67 261.2 247 87.4
Aa31LG6G6330 Aethionema arabicum HOM05D005280 ORTHO05D006253 1.8e-67 260.4 251 86.5
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 3.1e-67 259.6 257 83.7
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 4.1e-67 259.2 257 82.9
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 4.1e-67 259.2 257 83.3
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 4.1e-67 259.2 257 83.3
Carub.0001s2739 Capsella rubella HOM05D005280 ORTHO05D006253 5.3e-67 258.8 253 85.4
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 5.3e-67 258.8 257 82.9
THA.LOC104804949 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 5.3e-67 258.8 251 86.1
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 1.2e-66 257.7 258 80.6
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 2.6e-66 256.5 257 82.5
Hma1.2p1_1912F.1_g307320 Hydrangea macrophylla HOM05D005280 ORTHO05D006253 3.5e-66 256.1 244 86.5
Thhalv10008237m.g Eutrema salsugineum HOM05D005280 ORTHO05D006253 5.9e-66 255.4 251 84.9
BcaC05g26943 Brassica carinata HOM05D005280 ORTHO05D006253 7.7e-66 255.0 252 84.5
A09p37140 Brassica napus HOM05D005280 ORTHO05D006253 7.7e-66 255.0 252 84.5
C05p27910 Brassica napus HOM05D005280 ORTHO05D006253 7.7e-66 255.0 252 84.5
BolC5t31517H Brassica oleracea HOM05D005280 ORTHO05D006253 7.7e-66 255.0 252 84.5
BraA09t39230Z Brassica rapa HOM05D005280 ORTHO05D006253 7.7e-66 255.0 252 84.5
Sp1g25120 Schrenkiella parvula HOM05D005280 ORTHO05D006253 7.7e-66 255.0 250 85.6
Sed0011601 Sechium edule HOM05D005280 ORTHO05D006253 1.0e-65 254.6 143 83.9
CARHR028510 Cardamine hirsuta HOM05D005280 ORTHO05D006253 1.3e-65 254.2 250 85.2
Cc02_g15040 Coffea canephora HOM05D005280 ORTHO05D006253 1.1e-64 251.1 146 80.8
DCAR_007943 Daucus carota HOM05D005280 ORTHO05D006253 3.2e-64 249.6 143 81.1
Actinidia39510 Actinidia chinensis HOM05D005280 ORTHO05D006253 4.2e-64 249.2 242 86.8
CSS0022801 Camellia sinensis var. sinensis HOM05D005280 ORTHO05D006253 9.4e-64 248.1 143 79.7
Gohir.A10G036800 Gossypium hirsutum HOM05D005280 ORTHO05D006253 9.4e-64 248.1 143 81.1
SGA_v2.0_scaffold1G00053 Striga asiatica HOM05D005280 ORTHO05D006253 2.1e-63 246.9 248 83.5
Thecc.06G170100 Theobroma cacao HOM05D005280 ORTHO05D006253 2.7e-63 246.5 143 80.4
Duzib192G0183 Durio zibethinus HOM05D005280 ORTHO05D006253 3.6e-63 246.1 143 80.4
Gohir.D10G037400 Gossypium hirsutum HOM05D005280 ORTHO05D006253 4.7e-63 245.7 143 80.4
COL.COLO4_31288 Corchorus olitorius HOM05D005280 ORTHO05D006253 8.0e-63 245.0 143 79.0
unitig_699.g19366 Utricularia gibba HOM05D005280 ORTHO05D006253 8.0e-63 245.0 248 83.1
Gorai.011G039400 Gossypium raimondii HOM05D005280 ORTHO05D006253 1.0e-62 244.6 143 79.7
Lj1A206T60 Lonicera japonica HOM05D005280 ORTHO05D006253 6.7e-62 241.9 143 76.9
BcaC01g00082 Brassica carinata HOM05D005280 ORTHO05D006253 8.8e-62 241.5 143 79.0
C03p75590 Brassica napus HOM05D005280 ORTHO05D006253 8.8e-62 241.5 143 79.0
BolC3t19816H Brassica oleracea HOM05D005280 ORTHO05D006253 8.8e-62 241.5 143 79.0
HPP92_008751 Vanilla planifolia HOM05D005280 ORTHO05D006253 8.8e-62 241.5 252 80.6
BcaB07g32507 Brassica carinata HOM05D005280 ORTHO05D006253 1.1e-61 241.1 143 78.3
BraA08t34477Z Brassica rapa HOM05D005280 ORTHO05D006253 2.0e-61 240.4 143 78.3
EL10Ac9g22853 Beta vulgaris HOM05D005280 ORTHO05D006253 3.3e-61 239.6 143 76.2
AL1G42940 Arabidopsis lyrata HOM05D005280 ORTHO05D006253 9.7e-61 238.0 143 78.3
BcaB03g12145 Brassica carinata HOM05D005280 ORTHO05D006253 9.7e-61 238.0 143 77.6
PSO229G0003 Papaver somniferum HOM05D005280 ORTHO05D006253 1.3e-60 237.7 143 75.5
Aqoxy170s003 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 2.8e-60 236.5 143 76.2
Aqoxy7G03216 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 2.8e-60 236.5 143 76.2
Nn1g04427 Nelumbo nucifera HOM05D005280 ORTHO05D006253 2.8e-60 236.5 143 76.9
MBI05_g10770_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 3.7e-60 236.1 143 75.5
MBI07_g43934_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 3.7e-60 236.1 143 76.2
PSO675G8759 Papaver somniferum HOM05D005280 ORTHO05D006253 6.3e-60 235.3 143 74.8
Migut.M01035 Erythranthe guttata HOM05D005280 ORTHO05D006253 5.3e-59 232.3 243 82.3
TAR629G2088 Trochodendron aralioides HOM05D005280 ORTHO05D006253 9.1e-59 231.5 143 72.0
MSTRG.7412 Avicennia marina HOM05D005280 ORTHO05D006253 3.5e-58 229.6 143 74.8
CDE10G0374 Ceratophyllum demersum HOM05D005280 ORTHO05D006253 1.9e-56 223.8 143 70.6
Cpa.g.sc7.74 Carica papaya HOM05D005280 ORTHO05D006253 3.5e-50 203.0 257 78.2
Mapoly0030s0014 Marchantia polymorpha HOM05D005280 ORTHO05D006253 1.5e-48 197.6 143 62.2
Pp3c17_8040 Physcomitrium patens HOM05D005280 ORTHO05D006253 5.2e-46 189.1 143 58.7
PSO782G3364 Papaver somniferum HOM05D005280 ORTHO05D006253 8.8e-46 188.3 115 73.0
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 5.7e-45 185.7 214 82.2
SMO119G0322 Selaginella moellendorffii HOM05D005280 ORTHO05D006253 3.7e-44 183.0 143 60.1
Cre17.g730200 Chlamydomonas reinhardtii HOM05D005280 ORTHO05D006253 6.3e-44 182.2 139 59.7
A08p25250 Brassica napus HOM05D005280 ORTHO05D006253 1.4e-43 181.0 143 62.2
Zm00001eb238680 Zea mays HOM05D005280 ORTHO05D006253 1.4e-43 181.0 144 56.2
AagrBONN_evm.TU.Sc2ySwM_117.3414 Anthoceros agrestis HOM05D005280 ORTHO05D006253 2.8e-39 166.8 143 58.0
Aqoxy1G02047 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 3.6e-39 166.4 106 74.5
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 9.8e-37 158.3 257 65.8
CBR_g23503 Chara braunii HOM05D005280 ORTHO05D006253 9.2e-35 151.8 255 61.6
PRCOL_00004365 Prasinoderma coloniale HOM05D005280 ORTHO05D006253 3.9e-33 146.4 110 61.8
MCO15G120 Micromonas commoda HOM05D005280 ORTHO05D006253 1.8e-30 137.5 109 56.9
ATR0706G060 Amborella trichopoda HOM05D005280 ORTHO05D006253 9.8e-29 131.7 114 58.8
Pp3c15_2410 Physcomitrium patens HOM05D005280 ORTHO05D006253 1.3e-28 131.3 131 46.6
AUR62034161 Chenopodium quinoa HOM05D005280 ORTHO05D006253 3.1e-22 110.2 143 41.3
MBI16_g15539_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 3.6e-15 86.7 143 35.7
Potri.011G066600 Populus trichocarpa HOM05D005280 ORTHO05D006253 6.2e-15 85.9 208 60.6
Dinv41375 Davidia involucrata HOM05D000140 ORTHO05D000087 1.5e-13 81.3 127 43.3
FAN14G0286 Fragaria x ananassa HOM05D005280 ORTHO05D019446 2.4e-11 73.9 111 40.5
TPR.G11693 Trifolium pratense HOM05D005280 ORTHO05D006253 3.5e-10 70.1 33 93.9
VMungo1383G1864 Vigna mungo HOM05D005280 ORTHO05D006253 1.3e-09 68.2 41 73.2
VMungo0331G0944 Vigna mungo HOM05D005280 ORTHO05D006253 1.2e-07 61.6 35 74.3
Cfa022092 Carpinus fangiana HOM05D000164 ORTHO05D121826 8.9e-06 55.5 76 39.5


User provided reference genes

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