Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.6e-81 306.2 179 100.0
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 1.9e-66 256.1 156 91.7
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.8e-65 252.3 155 92.9
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 3.7e-49 198.7 178 63.5
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 6.5e-46 188.0 182 62.1
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 1.1e-45 187.2 179 59.2
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.6e-44 183.3 180 60.6
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 1.6e-44 183.3 183 59.0
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 4.6e-44 181.8 174 59.2
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 7.4e-42 174.5 181 56.9
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 8.2e-41 171.0 183 57.4
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 1.1e-37 160.6 189 50.8
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 7.2e-37 157.9 186 52.7
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 4.7e-36 155.2 194 51.5
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 4.7e-36 155.2 191 52.9
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.0e-35 154.1 185 50.8
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.4e-35 153.7 215 55.3
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 3.0e-35 152.5 181 51.9
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 5.1e-35 151.8 209 55.5
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.1e-34 150.6 195 56.4
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 2.6e-34 149.4 196 56.1
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.6e-34 149.4 196 56.1
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 5.7e-34 148.3 193 52.3
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.2e-33 146.4 186 50.0
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.1e-32 144.1 195 48.2
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.4e-32 143.7 180 49.4
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.8e-32 143.3 190 57.9
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.8e-32 143.3 198 52.5
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.2e-31 140.6 198 51.5
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 5.9e-31 138.3 203 44.8
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 7.7e-31 137.9 206 54.4
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 1.3e-30 137.1 158 53.2
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 1.7e-30 136.7 202 56.4
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.2e-30 136.3 199 52.8
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 3.8e-30 135.6 199 52.8
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 5.0e-30 135.2 199 52.3
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.5e-29 132.9 192 46.9
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 4.2e-29 132.1 188 48.4
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 4.2e-29 132.1 195 48.7
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 5.5e-29 131.7 202 44.1
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 7.2e-29 131.3 181 48.6
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.2e-28 130.6 185 45.9
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 2.7e-28 129.4 192 45.8
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 4.7e-28 128.6 197 48.2
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.0e-27 127.5 177 52.5
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 1.4e-27 127.1 214 42.5
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.4e-27 127.1 181 57.5
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 3.9e-27 125.6 179 47.5
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 6.7e-27 124.8 189 46.0
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 1.1e-26 124.0 186 53.8
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 1.1e-26 124.0 189 45.0
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 9.7e-26 120.9 170 54.1
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 1.1e-24 117.5 191 45.0
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 1.4e-24 117.1 174 56.3
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 1.6e-23 113.6 178 46.1
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 3.5e-23 112.5 186 42.5
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 5.9e-23 111.7 174 44.3
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.7e-22 110.2 193 47.2
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 5.5e-21 105.1 178 44.9
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 9.4e-21 104.4 227 34.8
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 9.4e-21 104.4 202 48.5
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 8.0e-20 101.3 152 44.7
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.4e-19 100.5 207 44.0
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 1.8e-19 100.1 181 43.1
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 5.2e-19 98.6 182 40.7
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.2e-18 97.4 179 44.1
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 4.4e-18 95.5 227 34.4
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 4.4e-18 95.5 165 46.7
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 1.3e-17 94.0 231 34.2
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.3e-17 94.0 224 33.9
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 2.8e-17 92.8 229 34.1
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 4.8e-17 92.0 227 33.5
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 6.3e-17 91.7 187 38.5
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.8e-16 90.1 196 37.2
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 2.4e-16 89.7 232 31.9
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 2.0e-15 86.7 230 32.6
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 2.7e-15 86.3 185 45.9
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 3.5e-15 85.9 238 31.9
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 4.5e-15 85.5 232 32.8
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 5.9e-15 85.1 209 33.0
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 5.9e-15 85.1 209 33.0
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 5.9e-15 85.1 181 39.8
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 1.3e-14 84.0 232 32.8
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 1.7e-14 83.6 232 32.3
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 2.2e-14 83.2 238 34.5
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 2.9e-14 82.8 225 32.9
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 5.0e-14 82.0 181 43.1
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 1.1e-13 80.9 229 31.9
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 4.2e-13 79.0 227 32.6
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 5.5e-13 78.6 165 39.4
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 9.4e-13 77.8 109 48.6
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 4.7e-12 75.5 164 37.2
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.4e-11 73.9 220 31.4
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 2.3e-11 73.2 200 33.5
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 6.3e-09 65.1 202 31.7
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 1.8e-08 63.5 205 30.7
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 4.1e-08 62.4 189 31.2
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 1.0e-06 57.8 191 33.5
MBI06_g45442_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.3e-06 57.4 140 37.1


User provided reference genes

Program Settings