Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.1e-72 276.6 138 100.0
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 5.5e-69 264.2 138 95.7
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 9.1e-40 167.2 139 69.8
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 8.0e-36 154.1 138 64.5
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 2.3e-35 152.5 139 65.5
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 7.5e-34 147.5 138 63.8
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.0e-30 137.1 138 63.0
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.6e-28 129.8 138 58.0
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 6.1e-28 127.9 138 54.3
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 4.4e-26 121.7 136 57.4
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 2.9e-25 119.0 142 50.0
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 4.9e-25 118.2 141 55.3
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 8.3e-25 117.5 134 50.7
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 3.2e-24 115.5 137 50.4
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 2.0e-23 112.8 138 49.3
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.7e-23 112.5 119 53.8
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.3e-22 110.2 128 55.5
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.3e-22 110.2 128 55.5
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.3e-22 110.2 115 59.1
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 2.3e-22 109.4 93 63.4
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.3e-22 109.4 133 46.6
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 2.3e-22 109.4 135 51.1
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 2.3e-22 109.4 136 47.1
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 5.0e-22 108.2 139 49.6
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 6.6e-22 107.8 138 47.1
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.1e-21 107.1 134 52.2
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.5e-21 106.7 109 55.0
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.5e-21 106.7 95 65.3
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 2.5e-21 105.9 110 57.3
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.3e-21 105.5 135 45.9
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 4.3e-21 105.1 125 52.0
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.6e-21 104.8 141 47.5
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.6e-21 104.8 128 53.1
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.3e-21 104.4 133 45.9
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 9.5e-21 104.0 145 50.3
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.2e-20 103.6 110 55.5
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.1e-20 102.8 83 66.3
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 2.8e-20 102.4 133 45.1
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 3.6e-20 102.1 138 47.8
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 3.6e-20 102.1 94 56.4
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 8.0e-20 100.9 132 47.7
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 1.4e-19 100.1 86 59.3
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.8e-19 99.8 132 48.5
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 3.1e-19 99.0 151 45.7
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 3.1e-19 99.0 85 61.2
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 3.1e-19 99.0 132 47.7
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 6.8e-19 97.8 105 55.2
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 8.9e-19 97.4 139 46.0
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 8.9e-19 97.4 136 46.3
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 8.9e-19 97.4 133 47.4
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 1.2e-18 97.1 132 50.8
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 1.5e-18 96.7 87 60.9
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.5e-18 96.7 91 61.5
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 2.0e-18 96.3 139 49.6
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 2.0e-18 96.3 142 43.7
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.6e-18 95.9 114 51.8
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 2.6e-18 95.9 105 54.3
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 2.6e-18 95.9 105 54.3
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 4.4e-18 95.1 110 52.7
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.8e-18 94.7 61 70.5
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 7.5e-18 94.4 132 47.7
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 7.5e-18 94.4 132 47.7
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 9.8e-18 94.0 108 52.8
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 1.3e-17 93.6 63 73.0
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.3e-17 93.6 63 73.0
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.3e-17 93.6 63 73.0
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 1.3e-17 93.6 140 45.7
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-17 92.8 66 71.2
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.9e-17 92.4 135 47.4
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.9e-17 92.4 135 47.4
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 6.4e-17 91.3 112 49.1
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 6.4e-17 91.3 87 55.2
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 6.4e-17 91.3 78 60.3
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.1e-16 90.5 137 45.3
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.1e-16 90.5 139 45.3
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.2e-16 89.0 94 56.4
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 7.0e-16 87.8 108 50.9
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 9.2e-16 87.4 147 40.8
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 2.0e-15 86.3 148 42.6
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 2.7e-15 85.9 132 47.7
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 7.8e-15 84.3 139 43.2
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.0e-14 84.0 69 63.8
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.3e-14 82.8 138 39.1
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 3.0e-14 82.4 138 37.7
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 5.0e-14 81.6 138 39.1
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 5.0e-14 81.6 147 36.1
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.5e-13 80.1 133 46.6
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.9e-13 79.7 140 42.9
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 5.6e-13 78.2 116 47.4
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 7.3e-13 77.8 140 37.9
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.2e-12 77.0 88 53.4
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.1e-12 76.3 131 41.2
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 6.2e-12 74.7 136 41.9
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 6.2e-12 74.7 79 53.2
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 8.1e-12 74.3 102 48.0
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 1.1e-11 73.9 72 56.9
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.4e-11 73.6 136 38.2
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 2.3e-11 72.8 135 39.3
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.1e-11 72.4 119 45.4
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.0e-11 72.0 136 37.5
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 5.2e-11 71.6 86 48.8
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 3.4e-10 68.9 112 41.1
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 3.4e-10 68.9 67 56.7
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 5.8e-10 68.2 87 48.3
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 5.8e-10 68.2 93 45.2
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 2.2e-09 66.2 56 58.9
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.9e-09 65.9 71 54.9
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 4.9e-09 65.1 138 42.0
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 6.4e-09 64.7 85 50.6
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 1.9e-08 63.2 132 35.6
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.2e-08 62.4 74 45.9
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 4.1e-08 62.0 61 55.7
Lalb_Chr09g0333561 Lupinus albus HOM05D006100 ORTHO05D007539 9.2e-08 60.8 132 37.9
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 3.5e-07 58.9 57 57.9
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 3.5e-07 58.9 57 57.9
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 6.0e-07 58.2 161 32.9
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.0e-06 57.4 125 36.8
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 3.9e-06 55.5 89 38.2


User provided reference genes

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