Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IGNJ4P Arachis hypogaea HOM05D000623 ORTHO05D006801 3.5e-58 228.0 112 100.0
arahy.Tifrunner.gnm1.ann1.FVW7UZ Arachis hypogaea HOM05D000623 ORTHO05D006801 1.8e-38 162.5 112 80.4
arahy.Tifrunner.gnm1.ann1.5W88IT Arachis hypogaea HOM05D000623 ORTHO05D006801 2.9e-36 155.2 112 75.9
arahy.Tifrunner.gnm1.ann1.RS8UUT Arachis hypogaea HOM05D000623 ORTHO05D006801 5.0e-36 154.5 111 76.6
arahy.Tifrunner.gnm1.ann1.03WG9V Arachis hypogaea HOM05D000623 ORTHO05D006801 6.5e-36 154.1 110 77.3
TPR.G27321 Trifolium pratense HOM05D000623 ORTHO05D006801 1.8e-30 136.0 111 64.0
Medtr4g077920 Medicago truncatula HOM05D000623 ORTHO05D006801 5.3e-30 134.4 111 64.9
Phvul.011G019900 Phaseolus vulgaris HOM05D000623 ORTHO05D006801 9.1e-30 133.7 111 63.1
VMungo1127G0704 Vigna mungo HOM05D000623 ORTHO05D006801 2.6e-29 132.1 111 62.2
Psat7g170560 Pisum sativum HOM05D000623 ORTHO05D006801 3.4e-29 131.7 111 64.0
Glyma.12G017500 Glycine max HOM05D000623 ORTHO05D006801 4.5e-29 131.3 111 63.1
Lj3g0009745 Lotus japonicus HOM05D000623 ORTHO05D006801 4.5e-29 131.3 111 60.4
Glyma.11G107900 Glycine max HOM05D000623 ORTHO05D006801 1.0e-28 130.2 111 63.1
arahy.Tifrunner.gnm1.ann1.BIG5T2 Arachis hypogaea HOM05D000623 ORTHO05D006801 8.5e-28 127.1 113 65.5
arahy.Tifrunner.gnm1.ann1.K7NSYA Arachis hypogaea HOM05D000623 ORTHO05D082845 8.5e-28 127.1 98 70.4
Ca_04914_v3 Cicer arietinum L. HOM05D000623 ORTHO05D006801 8.5e-28 127.1 111 62.2
Lalb_Chr09g0320171 Lupinus albus HOM05D000623 ORTHO05D006801 2.7e-26 122.1 111 62.2
PGSC0003DMG402003156 Solanum tuberosum HOM05D000623 ORTHO05D006801 1.8e-25 119.4 108 59.3
Nitab4.5_0001762g0090 Nicotiana tabacum HOM05D000623 ORTHO05D006801 3.0e-25 118.6 109 59.6
CAN.G1131.16 Capsicum annuum HOM05D000623 ORTHO05D006801 1.1e-24 116.7 108 56.5
Sopen03g027800 Solanum pennellii HOM05D000623 ORTHO05D006801 1.1e-24 116.7 108 57.4
Peaxi162Scf00516g00649 Petunia axillaris HOM05D000623 ORTHO05D006801 1.5e-24 116.3 108 56.5
arahy.Tifrunner.gnm1.ann1.EVZ30F Arachis hypogaea HOM05D000623 ORTHO05D006801 2.0e-24 115.9 90 74.4
Solyc03g097060.4 Solanum lycopersicum HOM05D000623 ORTHO05D006801 2.6e-24 115.5 108 57.4
Haze_00420 Corylus avellana HOM05D000623 ORTHO05D006801 3.3e-24 115.2 101 61.4
QL09p023747 Quercus lobata HOM05D000623 ORTHO05D006801 4.4e-24 114.8 102 58.8
Duzib177G1063 Durio zibethinus HOM05D000623 ORTHO05D006801 5.7e-24 114.4 109 57.8
Cfa016037 Carpinus fangiana HOM05D000623 ORTHO05D006801 7.4e-24 114.0 101 60.4
Nitab4.5_0000021g0630 Nicotiana tabacum HOM05D000623 ORTHO05D006801 9.7e-24 113.6 102 59.8
Thecc.05G214300 Theobroma cacao HOM05D000623 ORTHO05D006801 2.2e-23 112.5 105 57.1
Potri.019G049800 Populus trichocarpa HOM05D000623 ORTHO05D006801 2.8e-23 112.1 109 56.0
FvH4_7g34020 Fragaria vesca HOM05D000623 ORTHO05D006801 4.8e-23 111.3 101 59.4
RcHm_v2.0_Chr1g0384281 Rosa chinensis HOM05D000623 ORTHO05D006801 6.3e-23 110.9 101 58.4
Prupe.2G326700 Prunus persica HOM05D000623 ORTHO05D006801 8.2e-23 110.5 101 58.4
Sabra17G0072200 Salix brachista HOM05D000623 ORTHO05D006801 8.2e-23 110.5 101 57.4
EL10Ac3g05072 Beta vulgaris HOM05D000623 ORTHO05D006801 1.1e-22 110.2 103 59.2
Manes.09G126700 Manihot esculenta HOM05D000623 ORTHO05D006801 1.4e-22 109.8 101 56.4
Sed0018270 Sechium edule HOM05D000623 ORTHO05D006801 1.4e-22 109.8 108 52.8
Gohir.D03G051000 Gossypium hirsutum HOM05D000623 ORTHO05D006801 1.8e-22 109.4 101 57.4
Gorai.003G052700 Gossypium raimondii HOM05D000623 ORTHO05D006801 1.8e-22 109.4 101 57.4
MD07G1309300 Malus domestica HOM05D000623 ORTHO05D006801 1.8e-22 109.4 101 58.4
FAN03G1666 Fragaria x ananassa HOM05D000623 ORTHO05D006801 3.1e-22 108.6 101 59.4
Eucgr.K00083 Eucalyptus grandis HOM05D000623 ORTHO05D006801 4.1e-22 108.2 108 50.0
Hma1.2p1_1680F.1_g297150 Hydrangea macrophylla HOM05D000623 ORTHO05D006801 4.1e-22 108.2 98 59.2
vmacro06513 Vaccinium macrocarpon HOM05D000623 ORTHO05D006801 4.1e-22 108.2 101 57.4
Zm00001eb150150 Zea mays HOM05D000623 ORTHO05D006801 4.1e-22 108.2 103 57.3
CiPaw.05G219300 Carya illinoinensis HOM05D000623 ORTHO05D006801 5.3e-22 107.8 102 55.9
CsaV3_2G007550 Cucumis sativus L. HOM05D000623 ORTHO05D006801 5.3e-22 107.8 108 53.7
CANSAT21G1001 Cannabis sativa HOM05D000623 ORTHO05D006801 7.0e-22 107.5 109 52.3
Hund09794 Selenicereus undatus HOM05D000623 ORTHO05D006801 7.0e-22 107.5 111 53.2
TWI34G1816 Tripterygium wilfordii HOM05D000623 ORTHO05D006801 7.0e-22 107.5 108 52.8
Ciclev10019794m.g Citrus clementina HOM05D000623 ORTHO05D006801 9.1e-22 107.1 106 56.6
Gorai.004G257200 Gossypium raimondii HOM05D000623 ORTHO05D006801 1.2e-21 106.7 108 50.9
Rhsim03G0221800 Rhododendron simsii HOM05D000623 ORTHO05D006801 1.2e-21 106.7 102 55.9
CSS0015652 Camellia sinensis var. sinensis HOM05D000623 ORTHO05D006801 2.6e-21 105.5 102 58.8
MELO3C004131.2 Cucumis melo HOM05D000623 ORTHO05D006801 5.9e-21 104.4 108 51.9
Gohir.A08G221672 Gossypium hirsutum HOM05D000623 ORTHO05D006801 5.9e-21 104.4 108 50.0
SalBow4G1923 Salvia bowleyana HOM05D000623 ORTHO05D006801 5.9e-21 104.4 107 51.4
Sed0007302 Sechium edule HOM05D000623 ORTHO05D006801 5.9e-21 104.4 99 55.6
GSVIVG01014123001 Vitis vinifera HOM05D000623 ORTHO05D006801 5.9e-21 104.4 101 56.4
Actinidia34310 Actinidia chinensis HOM05D000623 ORTHO05D006801 7.7e-21 104.0 107 53.3
PSO384G3175 Papaver somniferum HOM05D000623 ORTHO05D006801 7.7e-21 104.0 108 53.7
Cc00_g28230 Coffea canephora HOM05D000623 ORTHO05D006801 1.0e-20 103.6 103 55.3
AUR62028180 Chenopodium quinoa HOM05D000623 ORTHO05D006801 1.3e-20 103.2 102 56.9
Migut.F00093 Erythranthe guttata HOM05D000623 ORTHO05D006801 1.3e-20 103.2 108 54.6
SGA_v2.0_scaffold18G08512 Striga asiatica HOM05D000623 ORTHO05D006801 1.3e-20 103.2 102 54.9
AL6G27900 Arabidopsis lyrata HOM05D000623 ORTHO05D006801 2.2e-20 102.4 116 51.7
HanXRQChr03g0088471 Helianthus annuus HOM05D000623 ORTHO05D006801 2.2e-20 102.4 108 51.9
Cc02_g00260 Coffea canephora HOM05D000623 ORTHO05D006801 2.9e-20 102.1 103 54.4
Lsat_1_v5_gn_9_47601 Lactuca sativa HOM05D000623 ORTHO05D006801 2.9e-20 102.1 108 49.1
MBI19_g25012_MAGBIO Magnolia biondii HOM05D000623 ORTHO05D006801 2.9e-20 102.1 106 51.9
THA.LOC104802924 Tarenaya hassleriana HOM05D000623 ORTHO05D006801 2.9e-20 102.1 110 47.3
MSTRG.26928 Avicennia marina HOM05D000623 ORTHO05D006801 3.8e-20 101.7 107 53.3
Oeu063726.1 Olea europaea HOM05D000623 ORTHO05D006801 3.8e-20 101.7 104 53.8
SGA_v2.0_scaffold44G16894 Striga asiatica HOM05D000623 ORTHO05D006801 5.0e-20 101.3 101 53.5
Nn7g37138 Nelumbo nucifera HOM05D000623 ORTHO05D006801 6.5e-20 100.9 104 54.8
TAR375G0749 Trochodendron aralioides HOM05D000623 ORTHO05D006801 6.5e-20 100.9 108 50.0
CiPaw.06G033100 Carya illinoinensis HOM05D000623 ORTHO05D006801 8.5e-20 100.5 101 55.4
ATR1096G091 Amborella trichopoda HOM05D000623 ORTHO05D006801 1.1e-19 100.1 108 50.9
Aqoxy7G00639 Aquilegia oxysepala HOM05D000623 ORTHO05D006801 1.1e-19 100.1 103 57.3
MD01G1236700 Malus domestica HOM05D000623 ORTHO05D006801 1.5e-19 99.8 125 47.2
unitig_60.g25782 Utricularia gibba HOM05D000623 ORTHO05D006801 1.9e-19 99.4 98 56.1
FAN09G0159 Fragaria x ananassa HOM05D000623 ORTHO05D006801 2.5e-19 99.0 96 56.2
CARHR196270 Cardamine hirsuta HOM05D000623 ORTHO05D006801 3.2e-19 98.6 104 50.0
AT5G16890 Arabidopsis thaliana HOM05D000623 ORTHO05D006801 5.5e-19 97.8 103 49.5
BcaNung04949 Brassica carinata HOM05D000623 ORTHO05D006801 5.5e-19 97.8 104 49.0
Carub.0006s1511 Capsella rubella HOM05D000623 ORTHO05D006801 5.5e-19 97.8 102 53.9
CDE09G1431 Ceratophyllum demersum HOM05D000623 ORTHO05D006801 5.5e-19 97.8 109 50.5
Rhsim07G0247900 Rhododendron simsii HOM05D000623 ORTHO05D006801 5.5e-19 97.8 156 39.7
A10p22340 Brassica napus HOM05D000623 ORTHO05D006801 7.2e-19 97.4 104 50.0
C09p60190 Brassica napus HOM05D000623 ORTHO05D006801 7.2e-19 97.4 103 49.5
BolC9t58852H Brassica oleracea HOM05D000623 ORTHO05D006801 7.2e-19 97.4 103 49.5
BraA03t10132Z Brassica rapa HOM05D000623 ORTHO05D006801 7.2e-19 97.4 104 49.0
BraA10t44293Z Brassica rapa HOM05D000623 ORTHO05D006801 7.2e-19 97.4 104 50.0
BcaB01g04966 Brassica carinata HOM05D000623 ORTHO05D006801 9.4e-19 97.1 99 49.5
Thhalv10020554m.g Eutrema salsugineum HOM05D000623 ORTHO05D006801 1.2e-18 96.7 107 48.6
THA.LOC104827211 Tarenaya hassleriana HOM05D000623 ORTHO05D006801 1.2e-18 96.7 99 48.5
Ah.13g072730 Amaranthus hybridus HOM05D000623 ORTHO05D006801 1.6e-18 96.3 103 54.4
ECA232G1729 Erigeron canadensis HOM05D002083 ORTHO05D006801 1.6e-18 96.3 107 47.7
SalBow4G0865 Salvia bowleyana HOM05D000623 ORTHO05D006801 1.6e-18 96.3 107 46.7
BcaC03g18521 Brassica carinata HOM05D000623 ORTHO05D006801 2.1e-18 95.9 103 49.5
Aa31LG11G12690 Aethionema arabicum HOM05D000623 ORTHO05D006801 2.7e-18 95.5 108 47.2
C03p09330 Brassica napus HOM05D000623 ORTHO05D006801 2.7e-18 95.5 104 48.1
BolC3t13428H Brassica oleracea HOM05D000623 ORTHO05D006801 2.7e-18 95.5 104 48.1
Sp6g27210 Schrenkiella parvula HOM05D000623 ORTHO05D006801 3.6e-18 95.1 103 48.5
A03p08070 Brassica napus HOM05D000623 ORTHO05D006801 4.7e-18 94.7 104 48.1
PSO339G0021 Papaver somniferum HOM05D000623 ORTHO05D006801 4.7e-18 94.7 99 52.5
BraA02t05349Z Brassica rapa HOM05D000623 ORTHO05D006801 1.0e-17 93.6 104 48.1
A02p03830 Brassica napus HOM05D000623 ORTHO05D006801 1.4e-17 93.2 104 48.1
Thhalv10013266m.g Eutrema salsugineum HOM05D000623 ORTHO05D006801 8.8e-17 90.5 104 47.1
arahy.Tifrunner.gnm1.ann1.EGZ3AH Arachis hypogaea HOM05D000623 ORTHO05D006801 3.3e-16 88.6 93 53.8
CDE08G0653 Ceratophyllum demersum HOM05D000623 ORTHO05D006801 1.3e-15 86.7 94 53.2
ClCG02G014450 Citrullus lanatus HOM05D000623 ORTHO05D006801 1.7e-15 86.3 108 45.4
BolC2t06780H Brassica oleracea HOM05D000623 ORTHO05D006801 2.8e-15 85.5 109 45.9
C02p08640 Brassica napus HOM05D000106 ORTHO05D006801 4.8e-15 84.7 108 46.3
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 1.2e-13 80.1 87 52.9
SMO164G0109 Selaginella moellendorffii HOM05D000623 ORTHO05D006801 1.6e-13 79.7 103 40.8
Gohir.D08G241900 Gossypium hirsutum HOM05D000623 ORTHO05D006801 2.7e-13 79.0 108 40.7
Pp3c14_19620 Physcomitrium patens HOM05D000623 ORTHO05D006801 9.4e-11 70.5 103 37.9
Atru.BG.252.p Acer truncatum HOM05D000623 ORTHO05D006801 1.0e-09 67.0 57 59.6
COL.COLO4_37804 Corchorus olitorius HOM05D000623 ORTHO05D006801 1.8e-09 66.2 57 57.9
DCAR_020410 Daucus carota HOM05D000623 ORTHO05D006801 1.8e-09 66.2 57 57.9
Duzib128G0029 Durio zibethinus HOM05D000623 ORTHO05D006801 3.0e-09 65.5 57 57.9
Oeu031700.1 Olea europaea HOM05D002083 ORTHO05D000332 8.8e-09 63.9 57 57.9
PGR142G3700 Punica granatum HOM05D000623 ORTHO05D006801 1.2e-08 63.5 57 54.4
Cpa.g.sc43.87 Carica papaya HOM05D000623 ORTHO05D006801 1.5e-08 63.2 57 56.1
DCAR_009018 Daucus carota HOM05D000623 ORTHO05D006801 4.4e-08 61.6 57 56.1
AUR62002067 Chenopodium quinoa HOM05D000623 ORTHO05D006801 1.1e-06 57.0 57 52.6


User provided reference genes

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