Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ID4K19 Arachis hypogaea HOM05D000668 ORTHO05D015975 1.2e-32 142.5 68 100.0
arahy.Tifrunner.gnm1.ann1.JM09FW Arachis hypogaea HOM05D000668 ORTHO05D015975 9.1e-25 116.3 73 78.1
arahy.Tifrunner.gnm1.ann1.Z1A7TI Arachis hypogaea HOM05D000668 ORTHO05D015975 9.1e-25 116.3 73 78.1
arahy.Tifrunner.gnm1.ann1.TD4C26 Arachis hypogaea HOM05D000668 ORTHO05D015975 3.2e-22 107.8 72 73.6
arahy.Tifrunner.gnm1.ann1.XX9KI1 Arachis hypogaea HOM05D000668 ORTHO05D015975 3.2e-22 107.8 72 73.6
arahy.Tifrunner.gnm1.ann1.FIQ4J0 Arachis hypogaea HOM05D000668 ORTHO05D015975 2.6e-19 98.2 61 75.4
arahy.Tifrunner.gnm1.ann1.JCRS0V Arachis hypogaea HOM05D000668 ORTHO05D015975 2.6e-19 98.2 61 75.4
arahy.Tifrunner.gnm1.ann1.AE87VC Arachis hypogaea HOM05D000668 ORTHO05D015975 6.3e-18 93.6 73 67.1
arahy.Tifrunner.gnm1.ann1.NHS9X5 Arachis hypogaea HOM05D000668 ORTHO05D015975 6.3e-18 93.6 73 67.1
arahy.Tifrunner.gnm1.ann1.DUTG24 Arachis hypogaea HOM05D000668 ORTHO05D015975 3.5e-16 87.8 59 71.2
arahy.Tifrunner.gnm1.ann1.NSAU2C Arachis hypogaea HOM05D000668 ORTHO05D015975 3.5e-16 87.8 59 71.2
Cc03_g01950 Coffea canephora HOM05D000668 ORTHO05D000516 2.9e-07 58.2 59 47.5
Oeu030342.1 Olea europaea HOM05D000668 ORTHO05D000516 8.6e-07 56.6 59 44.1
PSO151G0171 Papaver somniferum HOM05D000668 ORTHO05D000516 8.6e-07 56.6 59 47.5
TAR362G0455 Trochodendron aralioides HOM05D000668 ORTHO05D000516 8.6e-07 56.6 59 49.2
CAN.G665.20 Capsicum annuum HOM05D000668 ORTHO05D000516 1.1e-06 56.2 60 46.7
CiPaw.01G148800 Carya illinoinensis HOM05D000668 ORTHO05D000516 1.1e-06 56.2 59 49.2
Oeu043356.1 Olea europaea HOM05D000668 ORTHO05D000516 1.1e-06 56.2 59 44.1
MSTRG.20420 Avicennia marina HOM05D000668 ORTHO05D000516 1.5e-06 55.8 60 46.7
MSTRG.27981 Avicennia marina HOM05D000668 ORTHO05D000516 1.5e-06 55.8 60 46.7
DCAR_002812 Daucus carota HOM05D000668 ORTHO05D000516 1.5e-06 55.8 59 49.2
Eucgr.B01916 Eucalyptus grandis HOM05D000668 ORTHO05D000516 1.5e-06 55.8 59 47.5
Manes.03G194800 Manihot esculenta HOM05D000668 ORTHO05D000516 1.9e-06 55.5 59 49.2
MD13G1168800 Malus domestica HOM05D000668 ORTHO05D000516 2.5e-06 55.1 59 45.8
TAR633G1015 Trochodendron aralioides HOM05D000668 ORTHO05D000516 2.5e-06 55.1 59 47.5
Medtr4g119860 Medicago truncatula HOM05D000668 ORTHO05D000516 3.3e-06 54.7 59 47.5
GSVIVG01017757001 Vitis vinifera HOM05D000668 ORTHO05D000516 3.3e-06 54.7 59 49.2
Eucgr.H04532 Eucalyptus grandis HOM05D000668 ORTHO05D000516 4.2e-06 54.3 60 46.7
Gohir.A11G115300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 47.5
HanXRQChr13g0411301 Helianthus annuus HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 44.1
Nitab4.5_0002344g0010 Nicotiana tabacum HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 45.8
Nitab4.5_0008329g0040 Nicotiana tabacum HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 45.8
Peaxi162Scf00037g00921 Petunia axillaris HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 45.8
Sc19g0005310 Simmondsia chinensis HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 45.8
TPR.G39809 Trifolium pratense HOM05D000668 ORTHO05D000516 4.2e-06 54.3 59 47.5
MSTRG.5110 Avicennia marina HOM05D000668 ORTHO05D000516 5.5e-06 53.9 59 47.5
CANSAT78G0305 Cannabis sativa HOM05D000668 ORTHO05D000516 5.5e-06 53.9 59 45.8
CAN.G185.13 Capsicum annuum HOM05D000668 ORTHO05D000516 5.5e-06 53.9 60 43.3
MD16G1169200 Malus domestica HOM05D000668 ORTHO05D000516 5.5e-06 53.9 59 47.5
Oeu012116.1 Olea europaea HOM05D000668 ORTHO05D000516 5.5e-06 53.9 60 45.0
SalBow7G1520 Salvia bowleyana HOM05D000668 ORTHO05D000516 5.5e-06 53.9 59 45.8
Solyc01g099520.3 Solanum lycopersicum HOM05D000668 ORTHO05D000516 5.5e-06 53.9 59 45.8
Sopen01g043030 Solanum pennellii HOM05D000668 ORTHO05D000516 5.5e-06 53.9 59 45.8
MELO3C016020.2 Cucumis melo HOM05D000668 ORTHO05D000516 7.2e-06 53.5 59 45.8
Lalb_Chr12g0196571 Lupinus albus HOM05D000668 ORTHO05D000516 7.2e-06 53.5 60 46.7
Psat4g026000 Pisum sativum HOM05D000668 ORTHO05D000516 7.2e-06 53.5 59 47.5
Ca_10128_v3 Cicer arietinum L. HOM05D000668 ORTHO05D000516 9.5e-06 53.1 59 47.5
Nitab4.5_0000191g0100 Nicotiana tabacum HOM05D000668 ORTHO05D000516 9.5e-06 53.1 59 44.1
Nitab4.5_0003546g0030 Nicotiana tabacum HOM05D000668 ORTHO05D000516 9.5e-06 53.1 59 44.1


User provided reference genes

Program Settings