Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 2.3e-162 575.5 285 100.0
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 8.2e-160 567.0 285 98.6
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 2.0e-118 429.5 288 77.8
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 3.3e-116 422.2 286 76.6
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 1.6e-115 419.9 277 77.6
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 3.4e-113 412.1 276 76.4
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 2.2e-112 409.5 277 76.9
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 4.9e-112 408.3 276 76.1
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 6.6e-109 397.9 272 74.6
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 5.4e-103 378.3 285 67.0
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 3.0e-101 372.5 290 65.2
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 3.9e-101 372.1 292 65.8
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 1.1e-100 370.5 284 65.8
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.1e-100 370.5 284 65.8
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 2.5e-100 369.4 278 65.5
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 3.3e-100 369.0 275 65.8
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 7.3e-100 367.9 286 62.6
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.1e-99 366.3 282 64.5
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 3.6e-99 365.5 288 62.8
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 4.7e-99 365.2 274 68.2
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.7e-99 365.2 284 65.1
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 4.7e-99 365.2 285 66.3
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 1.2e-97 360.5 283 62.9
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 2.0e-97 359.8 279 65.2
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 3.4e-97 359.0 280 63.9
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 7.5e-97 357.8 290 62.1
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.7e-96 356.7 278 62.9
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 2.2e-96 356.3 283 63.6
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 2.9e-96 355.9 286 65.0
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.4e-95 353.6 290 62.1
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 4.1e-95 352.1 289 60.2
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 4.1e-95 352.1 280 63.6
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 7.0e-95 351.3 199 86.4
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 1.2e-94 350.5 274 62.0
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 1.6e-94 350.1 291 61.5
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 3.5e-94 349.0 274 62.8
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 3.5e-94 349.0 255 66.3
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 3.5e-94 349.0 255 66.3
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 3.5e-94 349.0 288 61.8
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 4.6e-94 348.6 282 63.5
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 4.6e-94 348.6 271 63.1
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 6.0e-94 348.2 270 63.7
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.7e-93 346.7 248 66.5
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 2.3e-93 346.3 282 61.3
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 3.0e-93 345.9 296 59.5
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 3.9e-93 345.5 270 63.3
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 3.9e-93 345.5 282 61.3
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 3.9e-93 345.5 294 60.9
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 5.0e-93 345.1 281 64.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 6.6e-93 344.7 289 60.2
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 6.6e-93 344.7 270 63.3
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 6.6e-93 344.7 274 63.1
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 8.6e-93 344.4 291 61.2
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.6e-92 341.7 294 59.9
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 5.6e-92 341.7 291 60.8
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 9.5e-92 340.9 285 61.1
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.2e-91 340.5 271 62.0
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 8.1e-91 337.8 290 59.3
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 1.8e-90 336.7 270 61.9
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 5.2e-90 335.1 269 61.3
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 8.9e-90 334.3 280 62.9
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 8.9e-90 334.3 283 59.0
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 4.4e-89 332.0 273 60.8
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 9.9e-89 330.9 272 61.4
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 4.9e-88 328.6 281 59.4
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.1e-87 327.4 278 59.4
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 1.9e-87 326.6 269 60.2
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.2e-86 323.9 315 54.0
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.6e-86 323.6 315 53.7
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 2.1e-86 323.2 263 63.1
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.3e-85 320.5 271 59.8
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.3e-85 319.7 283 59.7
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 2.1e-83 313.2 276 60.5
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 4.7e-83 312.0 211 71.1
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 4.7e-83 312.0 305 53.4
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 8.9e-82 307.8 211 68.2
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 1.5e-81 307.0 330 50.9
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 5.8e-81 305.1 270 58.5
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 7.6e-81 304.7 212 69.8
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 1.9e-79 300.1 247 62.3
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 3.2e-79 299.3 234 60.7
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 5.6e-76 288.5 198 69.7
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 1.2e-75 287.3 232 60.8
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 6.4e-72 275.0 268 54.5
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 4.2e-71 272.3 233 57.9
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 2.1e-70 270.0 220 62.3
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 7.8e-70 268.1 197 64.0
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 4.5e-65 252.3 233 51.1
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.4e-63 247.3 290 49.7
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 5.6e-60 235.3 194 61.9
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 1.3e-59 234.2 181 63.0
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 3.7e-59 232.6 228 50.4
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 6.2e-59 231.9 211 61.6
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 1.8e-58 230.3 225 54.2
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 1.8e-58 230.3 223 55.6
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 9.9e-57 224.6 171 66.1
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 4.8e-51 205.7 178 59.6
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.8e-50 203.8 133 73.7
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.9e-47 193.7 104 91.3
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 1.9e-47 193.7 102 92.2
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 5.5e-47 192.2 177 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 5.1e-45 185.7 175 55.4
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 2.5e-44 183.3 97 89.7
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 4.3e-44 182.6 237 43.0
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 1.4e-42 177.6 161 56.5
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 2.4e-42 176.8 305 36.7
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 6.7e-37 158.7 102 78.4
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.8e-35 153.3 140 52.1
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.5e-33 147.5 83 84.3
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 3.8e-32 142.9 102 65.7
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 3.8e-32 142.9 130 56.2
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 2.3e-29 133.7 100 62.0
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 1.3e-27 127.9 101 58.4
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 2.2e-27 127.1 94 69.1
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 6.3e-27 125.6 149 49.0
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 2.4e-26 123.6 102 59.8
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 4.1e-26 122.9 65 87.7
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 9.1e-26 121.7 87 63.2
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 2.9e-24 116.7 67 83.6
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 1.0e-21 108.2 235 31.5
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 2.8e-19 100.1 96 54.2
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-19 99.0 125 47.2
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 3.6e-14 83.2 124 45.2
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 4.0e-13 79.7 50 72.0
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 9.7e-12 75.1 54 66.7


User provided reference genes

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