Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IBL7LR Arachis hypogaea HOM05D006454 ORTHO05D008024 9.2e-175 617.5 499 100.0
arahy.Tifrunner.gnm1.ann1.AYWF3K Arachis hypogaea HOM05D006454 ORTHO05D008024 2.6e-169 599.4 502 98.6
Glyma.14G015800 Glycine max HOM05D006454 ORTHO05D008024 1.4e-117 427.6 513 75.4
VMungo0647G1066 Vigna mungo HOM05D006454 ORTHO05D008024 7.0e-114 415.2 509 75.2
Glyma.02G297900 Glycine max HOM05D006454 ORTHO05D008024 6.5e-112 408.7 506 74.9
Lalb_Chr04g0247971 Lupinus albus HOM05D006454 ORTHO05D008024 2.1e-110 403.7 435 76.1
Phvul.008G275700 Phaseolus vulgaris HOM05D006454 ORTHO05D008024 1.8e-109 400.6 521 68.9
LjContig00272g0005215 Lotus japonicus HOM05D006454 ORTHO05D008024 1.2e-100 371.3 442 75.6
Ca_06374_v3 Cicer arietinum L. HOM05D006454 ORTHO05D000136 4.2e-95 352.8 401 74.1
Haze_09788 Corylus avellana HOM05D006454 ORTHO05D008024 1.2e-94 351.3 530 63.4
Medtr5g094610 Medicago truncatula HOM05D006454 ORTHO05D008024 1.6e-94 350.9 455 67.3
FAN21G2064 Fragaria x ananassa HOM05D006454 ORTHO05D008024 4.4e-92 342.8 439 68.8
TPR.G14154 Trifolium pratense HOM05D006454 ORTHO05D008024 5.7e-92 342.4 512 64.5
Cfa020229 Carpinus fangiana HOM05D006454 ORTHO05D008024 9.8e-92 341.7 463 68.0
Gohir.D13G138500 Gossypium hirsutum HOM05D006454 ORTHO05D008024 9.8e-92 341.7 473 69.6
CANSAT11G2145 Cannabis sativa HOM05D006454 ORTHO05D008024 3.7e-91 339.7 462 70.6
Gorai.013G155100 Gossypium raimondii HOM05D006454 ORTHO05D008024 8.3e-91 338.6 473 69.1
FvH4_3g24060 Fragaria vesca HOM05D006454 ORTHO05D008024 1.1e-90 338.2 443 68.2
FAN11G0689 Fragaria x ananassa HOM05D006454 ORTHO05D008024 1.1e-90 338.2 443 68.2
Gohir.A13G134866 Gossypium hirsutum HOM05D006454 ORTHO05D008024 2.4e-90 337.0 473 68.9
FAN25G1123 Fragaria x ananassa HOM05D006454 ORTHO05D008024 7.0e-90 335.5 438 68.5
QL08p005504 Quercus lobata HOM05D006454 ORTHO05D008024 7.0e-90 335.5 449 67.7
FAN25G3289 Fragaria x ananassa HOM05D006454 ORTHO05D008024 9.1e-90 335.1 438 68.5
MD11G1204700 Malus domestica HOM05D006454 ORTHO05D008024 9.1e-90 335.1 446 67.0
RcHm_v2.0_Chr5g0042641 Rosa chinensis HOM05D006454 ORTHO05D008024 2.0e-89 334.0 442 68.1
Atru.chr2.3605 Acer truncatum HOM05D006454 ORTHO05D008024 8.6e-88 328.6 477 70.4
Manes.15G063200 Manihot esculenta HOM05D006454 ORTHO05D008024 8.6e-88 328.6 516 65.5
MD03G1188700 Malus domestica HOM05D006454 ORTHO05D008024 1.1e-87 328.2 446 71.3
Ciclev10008511m.g Citrus clementina HOM05D006454 ORTHO05D008024 2.5e-87 327.0 465 71.8
Psat2g008800 Pisum sativum HOM05D006454 ORTHO05D008024 1.2e-86 324.7 440 72.7
Thecc.07G022300 Theobroma cacao HOM05D006454 ORTHO05D008024 2.1e-86 323.9 472 66.3
Potri.001G361800 Populus trichocarpa HOM05D006454 ORTHO05D008024 8.9e-85 318.5 447 68.9
Prupe.4G234400 Prunus persica HOM05D006454 ORTHO05D008024 7.5e-84 315.5 441 66.0
CiPaw.11G201000 Carya illinoinensis HOM05D006454 ORTHO05D008024 1.4e-82 311.2 349 81.9
Aa31LG3G11530 Aethionema arabicum HOM05D006454 ORTHO05D008024 2.0e-81 307.4 450 66.0
MELO3C024909.2 Cucumis melo HOM05D006454 ORTHO05D008024 1.3e-80 304.7 468 62.0
TWI39G0040 Tripterygium wilfordii HOM05D006454 ORTHO05D008024 1.7e-80 304.3 458 68.6
ClCG09G021120 Citrullus lanatus HOM05D006454 ORTHO05D008024 2.3e-80 303.9 467 67.7
Eucgr.F03524 Eucalyptus grandis HOM05D006454 ORTHO05D008024 2.3e-80 303.9 457 71.8
DCAR_013215 Daucus carota HOM05D006454 ORTHO05D008024 5.0e-80 302.8 440 66.1
THA.LOC104813444 Tarenaya hassleriana HOM05D006454 ORTHO05D008024 8.6e-80 302.0 458 66.4
AL8G31150 Arabidopsis lyrata HOM05D006454 ORTHO05D008024 1.5e-79 301.2 441 65.3
BcaC01g06383 Brassica carinata HOM05D006454 ORTHO05D008024 1.5e-79 301.2 442 65.8
TAR626G0559 Trochodendron aralioides HOM05D006454 ORTHO05D008024 1.5e-79 301.2 447 64.0
A03p13940 Brassica napus HOM05D006454 ORTHO05D008024 1.9e-79 300.8 440 66.4
BraA03t10695Z Brassica rapa HOM05D006454 ORTHO05D008024 1.9e-79 300.8 440 66.4
Sed0021870 Sechium edule HOM05D006454 ORTHO05D008024 3.3e-79 300.1 489 63.8
BcaB01g04358 Brassica carinata HOM05D006454 ORTHO05D008024 4.3e-79 299.7 445 66.1
BolC3t14060H Brassica oleracea HOM05D006454 ORTHO05D008024 5.6e-79 299.3 442 65.4
C03p16380 Brassica napus HOM05D006454 ORTHO05D008024 7.3e-79 298.9 442 65.6
Aqoxy4G02215 Aquilegia oxysepala HOM05D006454 ORTHO05D008024 9.5e-79 298.5 470 66.4
Sp6g17500 Schrenkiella parvula HOM05D006454 ORTHO05D008024 2.1e-78 297.4 449 64.6
Sabra11G0078800 Salix brachista HOM05D006454 ORTHO05D008024 6.2e-78 295.8 445 68.1
Sabra11G0073300 Salix brachista HOM05D006454 ORTHO05D008024 1.0e-77 295.0 506 62.5
CsaV3_7G018450 Cucumis sativus L. HOM05D006454 ORTHO05D008024 1.8e-77 294.3 464 65.9
Carub.0008s1595 Capsella rubella HOM05D006454 ORTHO05D008024 3.1e-77 293.5 455 62.4
AT5G55580 Arabidopsis thaliana HOM05D006454 ORTHO05D008024 4.0e-77 293.1 442 65.6
AUR62017060 Chenopodium quinoa HOM05D006454 ORTHO05D008024 5.2e-77 292.7 434 67.5
Cc05_g14700 Coffea canephora HOM05D006454 ORTHO05D008024 2.0e-76 290.8 464 65.1
AUR62040658 Chenopodium quinoa HOM05D006454 ORTHO05D008024 4.4e-76 289.7 457 64.8
Oeu054328.1 Olea europaea HOM05D006454 ORTHO05D008024 7.5e-76 288.9 457 65.2
ECA246G2030 Erigeron canadensis HOM05D006454 ORTHO05D008024 4.9e-75 286.2 452 58.0
Nitab4.5_0002517g0040 Nicotiana tabacum HOM05D006454 ORTHO05D008024 4.9e-75 286.2 455 66.8
SalBow8G0989 Salvia bowleyana HOM05D006454 ORTHO05D008024 4.9e-75 286.2 462 59.7
Ah.04g166440 Amaranthus hybridus HOM05D006454 ORTHO05D008024 1.4e-74 284.6 454 67.2
MBI16_g11566_MAGBIO Magnolia biondii HOM05D006454 ORTHO05D008024 1.9e-74 284.3 472 61.0
CSS0002313 Camellia sinensis var. sinensis HOM05D006454 ORTHO05D000036 4.1e-74 283.1 397 64.0
CARHR268890 Cardamine hirsuta HOM05D006454 ORTHO05D008024 4.1e-74 283.1 332 77.4
Thhalv10013311m.g Eutrema salsugineum HOM05D006454 ORTHO05D008024 2.7e-73 280.4 450 52.9
EL10Ac4g07613 Beta vulgaris HOM05D006454 ORTHO05D008024 4.6e-73 279.6 458 66.4
Actinidia05032 Actinidia chinensis HOM05D006454 ORTHO05D008024 2.3e-72 277.3 459 64.7
Lsat_1_v5_gn_5_8060 Lactuca sativa HOM05D006454 ORTHO05D008024 3.0e-72 276.9 499 61.5
MSTRG.6985 Avicennia marina HOM05D006454 ORTHO05D008024 5.0e-72 276.2 473 63.0
HanXRQChr08g0235811 Helianthus annuus HOM05D006454 ORTHO05D008024 9.5e-71 271.9 450 60.0
PSO675G2716 Papaver somniferum HOM05D006454 ORTHO05D008024 2.3e-69 267.3 474 62.4
Nitab4.5_0000163g0310 Nicotiana tabacum HOM05D006454 ORTHO05D008024 2.0e-68 264.2 454 59.0
PSO541G2941 Papaver somniferum HOM05D006454 ORTHO05D008024 2.0e-68 264.2 465 63.0
CDE12G0728 Ceratophyllum demersum HOM05D006454 ORTHO05D008024 1.4e-66 258.1 333 72.4
Solyc12g015640.2 Solanum lycopersicum HOM05D006454 ORTHO05D008024 1.9e-66 257.7 442 59.0
Migut.M01675 Erythranthe guttata HOM05D006454 ORTHO05D008024 2.4e-66 257.3 470 53.8
PGR031G1939 Punica granatum HOM05D006454 ORTHO05D008024 7.1e-66 255.8 466 60.7
CiPaw.12G136000 Carya illinoinensis HOM05D006454 ORTHO05D008024 2.1e-65 254.2 467 56.5
vmacro11560 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 4.6e-65 253.1 401 63.8
Sopen12g007540 Solanum pennellii HOM05D006454 ORTHO05D008024 1.3e-64 251.5 434 60.6
CAN.G1239.14 Capsicum annuum HOM05D006454 ORTHO05D008024 6.6e-64 249.2 432 60.9
Peaxi162Scf00955g00214 Petunia axillaris HOM05D006454 ORTHO05D008024 8.6e-64 248.8 448 58.7
Lj1A885G30 Lonicera japonica HOM05D006454 ORTHO05D008024 1.2e-62 245.0 413 61.0
SGA_v2.0_scaffold171G38887 Striga asiatica HOM05D006454 ORTHO05D008024 2.1e-62 244.2 468 59.8
GSVIVG01037780001 Vitis vinifera HOM05D006454 ORTHO05D008024 3.6e-62 243.4 389 67.1
ATR1149G086 Amborella trichopoda HOM05D006454 ORTHO05D008024 1.1e-61 241.9 327 70.9
Dinv40835 Davidia involucrata HOM05D006454 ORTHO05D008024 5.8e-60 236.1 292 76.7
HPP92_007883 Vanilla planifolia HOM05D006454 ORTHO05D008024 4.9e-59 233.0 332 77.1
COL.COLO4_09787 Corchorus olitorius HOM05D006454 ORTHO05D008024 5.4e-58 229.6 446 60.5
Rhsim06G0226800 Rhododendron simsii HOM05D006454 ORTHO05D008024 2.7e-57 227.3 326 65.6
Sc16g0003560 Simmondsia chinensis HOM05D006454 ORTHO05D008024 2.2e-51 207.6 325 65.2
Hund01917 Selenicereus undatus HOM05D006454 ORTHO05D008024 7.1e-50 202.6 393 59.0
Oeu031063.1 Olea europaea HOM05D006454 ORTHO05D008024 2.7e-49 200.7 292 79.1
PGSC0003DMG401029813 Solanum tuberosum HOM05D006454 ORTHO05D008024 1.6e-46 191.4 292 73.3
Cpa.g.sc12.193 Carica papaya HOM05D006454 ORTHO05D008024 1.4e-45 188.3 267 49.8
HPP92_007898 Vanilla planifolia HOM05D006454 ORTHO05D008024 9.0e-45 185.7 285 81.8
Actinidia00093 Actinidia chinensis HOM05D006454 ORTHO05D008024 2.0e-44 184.5 394 61.2
Os07g0583200 Oryza sativa ssp. japonica HOM05D006454 ORTHO05D008024 6.4e-43 179.5 388 60.1
Zm00001eb107900 Zea mays HOM05D006454 ORTHO05D008024 1.9e-42 177.9 383 62.4
CAN.G489.2 Capsicum annuum HOM05D006454 ORTHO05D008024 2.4e-42 177.6 299 51.8
Prupe.4G234100 Prunus persica HOM05D006454 ORTHO05D008024 3.5e-41 173.7 140 83.6
Hund01916 Selenicereus undatus HOM05D006454 ORTHO05D008024 4.0e-37 160.2 443 31.2
BcaNung06723 Brassica carinata HOM05D000081 ORTHO05D008024 3.3e-31 140.6 322 42.2
unitig_899.g15274 Utricularia gibba HOM05D006454 ORTHO05D008024 1.4e-29 135.2 105 62.9
Nn1g07440 Nelumbo nucifera HOM05D006454 ORTHO05D008024 4.0e-29 133.7 92 88.0
BolC2t07758H Brassica oleracea HOM05D006454 ORTHO05D008024 7.1e-26 122.9 120 55.8
Cpa.g.sc12.192 Carica papaya HOM05D006454 ORTHO05D008024 2.7e-25 120.9 92 79.3
SEGI_11937 Sequoiadendron giganteum HOM05D047912 ORTHO05D008024 1.5e-20 105.1 322 56.5
Pp3c7_3780 Physcomitrium patens HOM05D006454 ORTHO05D008024 2.6e-20 104.4 323 59.4
Pp3c11_22990 Physcomitrium patens HOM05D006454 ORTHO05D008024 9.3e-18 95.9 323 55.1
Mapoly0042s0040 Marchantia polymorpha HOM05D006454 ORTHO05D008024 1.8e-16 91.7 325 52.6
BcaNung06724 Brassica carinata HOM05D006454 ORTHO05D008024 2.3e-16 91.3 55 74.5
vmacro10144 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 2.2e-11 74.7 326 25.2
AagrBONN_evm.TU.Sc2ySwM_117.1902 Anthoceros agrestis HOM05D006454 ORTHO05D008024 1.1e-07 62.4 103 27.2


User provided reference genes

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