Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.IAT0HN Arachis hypogaea HOM05D000181 ORTHO05D084057 2.9e-44 181.4 85 100.0
arahy.Tifrunner.gnm1.ann1.MKNY28 Arachis hypogaea HOM05D000181 ORTHO05D008575 9.3e-19 96.7 78 64.1
arahy.Tifrunner.gnm1.ann1.34YIIN Arachis hypogaea HOM05D000181 ORTHO05D008575 1.9e-08 62.4 29 96.6
arahy.Tifrunner.gnm1.ann1.K5ELC5 Arachis hypogaea HOM05D000181 ORTHO05D008575 1.9e-08 62.4 29 96.6
Cfa003671 Carpinus fangiana HOM05D000181 ORTHO05D008575 4.3e-08 61.2 29 93.1
CiPaw.01G233000 Carya illinoinensis HOM05D000181 ORTHO05D008575 4.3e-08 61.2 29 93.1
Haze_15820 Corylus avellana HOM05D000181 ORTHO05D008575 4.3e-08 61.2 29 93.1
Lalb_Chr24g0396101 Lupinus albus HOM05D000181 ORTHO05D008575 4.3e-08 61.2 39 69.2
QL05p020644 Quercus lobata HOM05D000181 ORTHO05D008575 4.3e-08 61.2 29 93.1
Prupe.3G061400 Prunus persica HOM05D000181 ORTHO05D008575 1.3e-07 59.7 39 71.8
Lj3g0006443 Lotus japonicus HOM05D000181 ORTHO05D008575 2.2e-07 58.9 29 89.7
MD09G1206000 Malus domestica HOM05D000181 ORTHO05D008575 2.2e-07 58.9 29 89.7
Glyma.13G355400 Glycine max HOM05D000181 ORTHO05D008575 4.8e-07 57.8 29 86.2
Glyma.15G018800 Glycine max HOM05D000181 ORTHO05D008575 4.8e-07 57.8 29 86.2
Phvul.005G167100 Phaseolus vulgaris HOM05D000181 ORTHO05D008575 8.2e-07 57.0 29 86.2
Prupe.3G065400 Prunus persica HOM05D000181 ORTHO05D008575 8.2e-07 57.0 39 69.2
VMungo1080G1473 Vigna mungo HOM05D000181 ORTHO05D008575 8.2e-07 57.0 29 86.2
Nitab4.5_0003039g0070 Nicotiana tabacum HOM05D000181 ORTHO05D008575 1.4e-06 56.2 33 72.7
Ca_01156_v3 Cicer arietinum L. HOM05D000181 ORTHO05D008575 1.8e-06 55.8 30 76.7
ClCG09G000030 Citrullus lanatus HOM05D000181 ORTHO05D008575 3.1e-06 55.1 29 82.8
Sed0006712 Sechium edule HOM05D000181 ORTHO05D008575 3.1e-06 55.1 29 82.8
FvH4_6g32150 Fragaria vesca HOM05D000181 ORTHO05D008575 4.1e-06 54.7 29 82.8
FAN02G2536 Fragaria x ananassa HOM05D000181 ORTHO05D008575 4.1e-06 54.7 29 82.8
FAN05G1720 Fragaria x ananassa HOM05D000181 ORTHO05D008575 4.1e-06 54.7 29 82.8
FAN09G0786 Fragaria x ananassa HOM05D000181 ORTHO05D008575 4.1e-06 54.7 29 82.8
FAN14G4410 Fragaria x ananassa HOM05D000181 ORTHO05D008575 4.1e-06 54.7 29 82.8
RcHm_v2.0_Chr2g0140041 Rosa chinensis HOM05D000181 ORTHO05D008575 4.1e-06 54.7 29 82.8
CANSAT56G0902 Cannabis sativa HOM05D000181 ORTHO05D008575 6.9e-06 53.9 40 57.5
CARHR091500 Cardamine hirsuta HOM05D000181 ORTHO05D008575 6.9e-06 53.9 29 82.8
Gohir.A02G118800 Gossypium hirsutum HOM05D000181 ORTHO05D008575 6.9e-06 53.9 29 82.8
Gorai.003G063400 Gossypium raimondii HOM05D000181 ORTHO05D008575 6.9e-06 53.9 29 82.8
Hma1.2p1_1056F.1_g252680 Hydrangea macrophylla HOM05D000181 ORTHO05D008575 6.9e-06 53.9 29 82.8
Thecc.06G097300 Theobroma cacao HOM05D000181 ORTHO05D008575 6.9e-06 53.9 29 82.8
ATR0705G164 Amborella trichopoda HOM05D000181 ORTHO05D008575 9.1e-06 53.5 29 79.3
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 9.1e-06 53.5 29 79.3
Potri.003G050600 Populus trichocarpa HOM05D000181 ORTHO05D008575 9.1e-06 53.5 29 79.3
Sabra03G0028300 Salix brachista HOM05D000181 ORTHO05D008575 9.1e-06 53.5 29 79.3
TAR624G1089 Trochodendron aralioides HOM05D000181 ORTHO05D008575 9.1e-06 53.5 29 79.3


User provided reference genes

Program Settings