Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.I9F5AW Arachis hypogaea HOM05D008911 ORTHO05D010818 8.3e-148 527.3 329 100.0
arahy.Tifrunner.gnm1.ann1.KRWC22 Arachis hypogaea HOM05D008911 ORTHO05D010818 4.7e-111 405.2 343 74.1
arahy.Tifrunner.gnm1.ann1.32QDND Arachis hypogaea HOM05D008911 ORTHO05D010818 6.2e-111 404.8 366 77.9
arahy.Tifrunner.gnm1.ann1.00CGR0 Arachis hypogaea HOM05D008911 ORTHO05D010818 2.7e-106 389.4 335 80.6
arahy.Tifrunner.gnm1.ann1.A6C13D Arachis hypogaea HOM05D008911 ORTHO05D010818 9.6e-96 354.4 366 73.0
arahy.Tifrunner.gnm1.ann1.LA96E9 Arachis hypogaea HOM05D008911 ORTHO05D010818 2.1e-95 353.2 338 68.6
arahy.Tifrunner.gnm1.ann1.FHHV9X Arachis hypogaea HOM05D008911 ORTHO05D010818 4.5e-93 345.5 344 66.3
arahy.Tifrunner.gnm1.ann1.IH53PY Arachis hypogaea HOM05D008911 ORTHO05D010818 1.7e-92 343.6 356 72.5
arahy.Tifrunner.gnm1.ann1.1WNZ6F Arachis hypogaea HOM05D008911 ORTHO05D010818 4.5e-85 318.9 305 66.9
arahy.Tifrunner.gnm1.ann1.368SCS Arachis hypogaea HOM05D008911 ORTHO05D010818 7.4e-80 301.6 288 77.8
arahy.Tifrunner.gnm1.ann1.QNC19D Arachis hypogaea HOM05D008911 ORTHO05D010818 7.4e-80 301.6 345 55.1
arahy.Tifrunner.gnm1.ann1.16ZD3Q Arachis hypogaea HOM05D008911 ORTHO05D010818 1.9e-22 110.9 143 49.0
Medtr7g057460 Medicago truncatula HOM05D016779 ORTHO05D010818 1.9e-19 100.9 134 40.3
Medtr7g057480 Medicago truncatula HOM05D016779 ORTHO05D010818 1.9e-19 100.9 134 40.3
Medtr4g039410 Medicago truncatula HOM05D016779 ORTHO05D010818 7.3e-19 99.0 135 38.5
Glyma.08G347200 Glycine max HOM05D008911 ORTHO05D010818 9.5e-19 98.6 113 44.2
Glyma.18G173700 Glycine max HOM05D008911 ORTHO05D010818 3.6e-18 96.7 126 42.1
Lj1g0019231 Lotus japonicus HOM05D008911 ORTHO05D010818 4.7e-18 96.3 131 41.2
Ca_07510_v3 Cicer arietinum L. HOM05D008911 ORTHO05D010818 8.0e-18 95.5 133 42.1
Ca_24126_v3 Cicer arietinum L. HOM05D008911 ORTHO05D010818 8.0e-18 95.5 133 42.1
Medtr0637s0010 Medicago truncatula HOM05D016779 ORTHO05D010818 8.0e-18 95.5 134 39.6
Lalb_Chr00c01g0403771 Lupinus albus HOM05D008911 ORTHO05D010818 1.4e-17 94.7 138 37.0
Glyma.18G173900 Glycine max HOM05D008911 ORTHO05D010818 2.3e-17 94.0 126 40.5
Glyma.18G174000 Glycine max HOM05D008911 ORTHO05D010818 2.3e-17 94.0 126 40.5
Glyma.18G174100 Glycine max HOM05D008911 ORTHO05D010818 4.0e-17 93.2 126 40.5
Medtr0702s0010 Medicago truncatula HOM05D008911 ORTHO05D010818 2.6e-16 90.5 136 39.0
Medtr0702s0020 Medicago truncatula HOM05D008911 ORTHO05D010818 2.6e-16 90.5 130 40.8
Ca_24128_v3 Cicer arietinum L. HOM05D008911 ORTHO05D010818 3.4e-16 90.1 133 40.6
Phvul.008G123933 Phaseolus vulgaris HOM05D008911 ORTHO05D010818 7.5e-16 89.0 106 39.6
Ca_24129_v3 Cicer arietinum L. HOM05D008911 ORTHO05D010818 1.3e-15 88.2 133 39.8
Medtr8g081520 Medicago truncatula HOM05D008911 ORTHO05D010818 1.3e-15 88.2 134 38.1
Ca_22775_v3 Cicer arietinum L. HOM05D008911 ORTHO05D010818 2.2e-15 87.4 137 37.2
Ca_22776_v3 Cicer arietinum L. HOM05D008911 ORTHO05D010818 2.2e-15 87.4 137 37.2
Medtr0662s0020 Medicago truncatula HOM05D008911 ORTHO05D010818 2.2e-15 87.4 139 37.4
Lj3g0024339 Lotus japonicus HOM05D008911 ORTHO05D010818 3.7e-15 86.7 126 37.3
TPR.G15295 Trifolium pratense HOM05D008911 ORTHO05D010818 2.4e-14 84.0 133 37.6
Phvul.011G108200 Phaseolus vulgaris HOM05D008911 ORTHO05D010818 4.1e-14 83.2 108 37.0
Psat0s3118g0120 Pisum sativum HOM05D008911 ORTHO05D010818 6.6e-12 75.9 125 36.0
Psat2g118200 Pisum sativum HOM05D008911 ORTHO05D010818 8.6e-12 75.5 126 35.7
Phvul.011G108400 Phaseolus vulgaris HOM05D008911 ORTHO05D010818 1.1e-11 75.1 101 38.6
VMungo1383G1256 Vigna mungo HOM05D008911 ORTHO05D010818 1.1e-09 68.6 99 36.4
GSVIVG01021322001 Vitis vinifera HOM05D000336 ORTHO05D000593 5.2e-09 66.2 131 33.6
CiPaw.10G098000 Carya illinoinensis HOM05D000336 ORTHO05D000593 6.8e-09 65.9 135 34.1
Ciclev10014673m.g Citrus clementina HOM05D000336 ORTHO05D000593 1.2e-08 65.1 117 34.2
arahy.Tifrunner.gnm1.ann1.UZ271C Arachis hypogaea HOM05D002216 ORTHO05D002011 2.0e-08 64.3 117 34.2
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 7.5e-08 62.4 133 33.1
THA.LOC104806108 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 1.7e-07 61.2 119 36.1
Lj3g0003889 Lotus japonicus HOM05D000336 ORTHO05D018477 2.9e-07 60.5 111 31.5
MD05G1292900 Malus domestica HOM05D000336 ORTHO05D000593 3.7e-07 60.1 117 34.2
Potri.001G355300 Populus trichocarpa HOM05D000336 ORTHO05D000593 3.7e-07 60.1 121 33.9
AL8G11800 Arabidopsis lyrata HOM05D000336 ORTHO05D000593 4.9e-07 59.7 119 32.8
CiPaw.09G131900 Carya illinoinensis HOM05D000336 ORTHO05D000593 4.9e-07 59.7 121 33.9
Lalb_Chr13g0295421 Lupinus albus HOM05D000336 ORTHO05D000593 6.4e-07 59.3 118 33.1
Thecc.06G159500 Theobroma cacao HOM05D000336 ORTHO05D000593 6.4e-07 59.3 121 32.2
Aqoxy4G00167 Aquilegia oxysepala HOM05D000336 ORTHO05D000593 8.3e-07 58.9 120 30.8
Potri.011G077100 Populus trichocarpa HOM05D000336 ORTHO05D000593 8.3e-07 58.9 120 32.5
Duzib160G0793 Durio zibethinus HOM05D000336 ORTHO05D000593 1.1e-06 58.5 121 33.1
Lsat_1_v5_gn_7_26420 Lactuca sativa HOM05D000336 ORTHO05D000593 1.1e-06 58.5 131 32.8
Lj6g0004648 Lotus japonicus HOM05D000336 ORTHO05D000593 1.1e-06 58.5 143 30.8
Actinidia39543 Actinidia chinensis HOM05D000336 ORTHO05D000593 1.4e-06 58.2 116 33.6
AT5G46550 Arabidopsis thaliana HOM05D000336 ORTHO05D000593 1.4e-06 58.2 115 34.8
Ca_00499_v3 Cicer arietinum L. HOM05D000336 ORTHO05D000593 1.4e-06 58.2 125 28.8
ClCG01G024140 Citrullus lanatus HOM05D000336 ORTHO05D000593 1.4e-06 58.2 134 30.6
Thhalv10000859m.g Eutrema salsugineum HOM05D000336 ORTHO05D000593 1.4e-06 58.2 115 32.2
Sabra11G0064100 Salix brachista HOM05D000336 ORTHO05D000593 1.4e-06 58.2 121 33.1
MELO3C007177.2 Cucumis melo HOM05D000336 ORTHO05D000593 1.9e-06 57.8 116 31.0
Glyma.15G089700 Glycine max HOM05D000336 ORTHO05D000593 1.9e-06 57.8 115 33.9
Manes.17G063000 Manihot esculenta HOM05D000336 ORTHO05D000593 1.9e-06 57.8 117 32.5
THA.LOC104827741 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 1.9e-06 57.8 119 32.8
TWI73G1232 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 1.9e-06 57.8 122 32.8
Hma1.2p1_0012F.1_g007690 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 2.4e-06 57.4 135 31.9
CSS0024579 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 3.2e-06 57.0 116 33.6
Gohir.D10G033100 Gossypium hirsutum HOM05D000336 ORTHO05D000593 3.2e-06 57.0 121 33.1
Duzib235G1112 Durio zibethinus HOM05D000336 ORTHO05D000593 4.1e-06 56.6 121 33.1
Lalb_Chr12g0204811 Lupinus albus HOM05D000336 ORTHO05D000593 4.1e-06 56.6 115 33.9
vmacro19596 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 4.1e-06 56.6 112 28.6
Dinv32307 Davidia involucrata HOM05D000336 ORTHO05D000593 5.4e-06 56.2 116 32.8
MSTRG.16194 Avicennia marina HOM05D000336 ORTHO05D000593 7.1e-06 55.8 115 33.9
MD10G1268800 Malus domestica HOM05D000336 ORTHO05D000593 7.1e-06 55.8 117 32.5
CSS0035401 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 9.2e-06 55.5 136 30.1
CsaV3_6G051270 Cucumis sativus L. HOM05D000336 ORTHO05D000593 9.2e-06 55.5 134 30.6
Gohir.A10G032300 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.2e-06 55.5 121 32.2
Gorai.011G034900 Gossypium raimondii HOM05D000336 ORTHO05D000593 9.2e-06 55.5 121 32.2
Lj3g0009213 Lotus japonicus HOM05D000336 ORTHO05D018477 9.2e-06 55.5 102 32.4


User provided reference genes

Program Settings