Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 1.2e-166 589.7 291 100.0
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 4.9e-136 488.0 244 98.8
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 7.1e-135 484.2 244 98.0
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.2e-134 483.4 244 97.5
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 3.0e-133 478.8 244 96.7
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 5.5e-127 458.0 244 93.9
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 5.5e-127 458.0 244 91.4
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.0e-125 453.8 280 83.6
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 5.1e-125 451.4 244 90.2
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 5.6e-124 448.0 243 88.9
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 2.8e-123 445.7 244 88.5
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 6.2e-123 444.5 244 88.9
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 1.2e-121 440.3 243 86.8
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 1.5e-121 439.9 244 86.9
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 2.6e-121 439.1 244 87.3
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 1.1e-119 433.7 244 86.1
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 1.9e-119 433.0 244 85.7
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 1.9e-119 433.0 242 86.0
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 2.5e-119 432.6 244 85.7
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 2.5e-119 432.6 244 85.7
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 3.2e-119 432.2 244 84.8
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 3.2e-119 432.2 245 86.5
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 4.2e-119 431.8 244 85.2
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 5.5e-119 431.4 244 86.1
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 9.3e-119 430.6 244 85.7
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.6e-118 429.9 246 85.0
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.6e-118 429.9 246 85.4
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 1.6e-118 429.9 244 84.8
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 7.9e-118 427.6 244 84.0
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 1.0e-117 427.2 249 85.1
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 1.8e-117 426.4 244 84.4
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 1.8e-117 426.4 242 85.1
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 1.8e-117 426.4 245 84.1
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 3.9e-117 425.2 246 83.3
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 1.1e-116 423.7 244 83.2
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 1.5e-116 423.3 244 82.8
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 1.5e-116 423.3 244 83.2
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.9e-116 422.9 244 82.8
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 2.5e-116 422.5 245 84.5
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 2.5e-116 422.5 244 82.8
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 2.5e-116 422.5 244 83.6
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 3.3e-116 422.2 244 83.2
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 5.7e-116 421.4 244 81.6
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 5.7e-116 421.4 244 82.8
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 7.4e-116 421.0 244 82.0
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 9.7e-116 420.6 244 82.0
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 1.3e-115 420.2 241 83.4
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 1.3e-115 420.2 244 84.4
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 1.6e-115 419.9 244 83.6
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 1.6e-115 419.9 244 81.6
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 1.6e-115 419.9 244 81.6
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 1.6e-115 419.9 244 82.8
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 1.6e-115 419.9 244 83.2
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 2.2e-115 419.5 244 82.8
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 2.8e-115 419.1 244 82.4
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 3.7e-115 418.7 242 83.1
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 3.7e-115 418.7 238 84.0
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 4.8e-115 418.3 244 82.4
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 4.8e-115 418.3 244 82.0
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 8.2e-115 417.5 244 81.1
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.2e-115 417.5 244 81.6
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 1.1e-114 417.2 244 80.3
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 1.1e-114 417.2 244 81.6
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 1.1e-114 417.2 244 82.0
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 1.4e-114 416.8 244 82.0
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 1.8e-114 416.4 244 81.6
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-114 416.4 244 81.6
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 2.4e-114 416.0 245 81.2
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 3.1e-114 415.6 244 81.1
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 3.1e-114 415.6 244 81.1
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 3.1e-114 415.6 243 83.5
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 5.3e-114 414.8 244 82.8
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 5.3e-114 414.8 281 75.8
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 1.2e-113 413.7 244 80.3
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 1.5e-113 413.3 286 71.3
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 3.4e-113 412.1 244 80.3
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.5e-113 411.8 244 80.3
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 4.5e-113 411.8 244 81.6
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 4.5e-113 411.8 244 81.6
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 5.9e-113 411.4 244 83.2
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.7e-113 411.0 250 79.6
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.0e-112 410.6 250 79.6
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-112 409.8 250 79.6
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 3.8e-112 408.7 244 79.9
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 5.0e-112 408.3 245 80.0
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 6.5e-112 407.9 244 82.4
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 8.5e-112 407.5 245 80.0
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 1.4e-111 406.8 244 78.7
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 1.9e-111 406.4 244 78.7
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.9e-111 406.4 244 79.9
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 9.4e-111 404.1 244 78.7
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 1.6e-110 403.3 245 79.2
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 1.6e-110 403.3 240 82.9
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 2.7e-110 402.5 246 79.7
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 1.0e-109 400.6 245 78.8
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 1.4e-109 400.2 242 81.4
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 6.7e-109 397.9 270 73.0
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 2.5e-108 396.0 244 75.8
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 5.7e-108 394.8 244 78.7
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 6.3e-107 391.3 244 78.3
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 1.4e-106 390.2 261 73.9
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 3.1e-106 389.0 244 77.9
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 4.1e-106 388.7 273 67.4
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 5.3e-106 388.3 216 87.5
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.2e-105 387.1 250 77.2
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 4.5e-105 385.2 244 77.9
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 7.7e-105 384.4 244 77.9
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 1.3e-104 383.6 236 75.8
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 1.7e-104 383.3 244 77.5
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 2.2e-104 382.9 272 66.9
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 3.8e-104 382.1 244 77.9
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 3.8e-104 382.1 244 74.6
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 1.9e-103 379.8 244 76.2
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 2.5e-103 379.4 270 70.4
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 2.7e-102 375.9 243 73.7
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 3.6e-102 375.6 244 74.6
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.9e-102 374.4 244 75.4
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 2.3e-101 372.9 244 70.5
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 6.7e-101 371.3 244 74.6
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 8.8e-101 370.9 216 83.8
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 1.1e-100 370.5 244 73.4
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.8e-99 365.9 244 73.8
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 2.8e-99 365.9 214 86.4
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-98 363.2 277 64.3
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 2.4e-98 362.8 212 84.9
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.1e-98 362.1 271 65.7
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.2e-97 360.5 271 65.3
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.2e-97 360.5 245 70.2
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.5e-97 359.0 277 64.3
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.5e-97 358.6 277 64.3
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 4.5e-97 358.6 244 72.5
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.0e-96 357.5 246 69.9
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 5.0e-96 355.1 246 69.5
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.9e-95 353.2 246 69.1
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 4.2e-95 352.1 244 70.1
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 4.2e-95 352.1 246 68.3
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 9.4e-95 350.9 210 79.0
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.6e-94 350.1 245 67.8
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 5.2e-93 345.1 245 66.5
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 5.7e-92 341.7 245 65.3
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 2.8e-91 339.3 244 65.2
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 2.8e-91 339.3 245 66.1
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 3.1e-90 335.9 187 85.6
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 4.1e-90 335.5 246 67.1
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 1.2e-89 334.0 245 65.3
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 3.2e-87 325.9 246 65.0
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.7e-83 313.5 224 66.5
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 3.1e-82 309.3 212 74.5
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.2e-78 297.4 172 83.7
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 3.0e-77 292.7 270 55.2
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 2.6e-76 289.7 164 82.3
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.6e-72 274.6 164 77.4
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.4e-69 267.3 247 54.7
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 1.5e-60 237.3 143 79.7
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 3.0e-56 223.0 181 64.1
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 3.4e-52 209.5 188 61.7
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 2.5e-47 193.4 250 40.8
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 5.6e-47 192.2 164 58.5
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 8.3e-43 178.3 239 40.6
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 5.4e-42 175.6 102 81.4
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.1e-42 175.3 108 74.1
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 3.1e-37 159.8 129 65.9
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 3.4e-36 156.4 109 74.3
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 1.7e-32 144.1 254 35.4
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 6.2e-30 135.6 80 81.2
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 8.1e-30 135.2 77 81.8
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.9e-27 126.7 67 89.6
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 1.9e-23 114.0 108 54.6
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 6.2e-22 109.0 64 79.7
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 2.4e-21 107.1 67 67.2
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 5.8e-20 102.4 65 73.8
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 2.4e-18 97.1 57 78.9
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 6.0e-17 92.4 82 56.1
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 3.7e-14 83.2 65 61.5
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 8.1e-14 82.0 60 63.3
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 3.1e-13 80.1 49 73.5
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 3.1e-13 80.1 49 73.5
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 4.5e-12 76.3 57 64.9
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 7.6e-12 75.5 57 64.9
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 1.3e-08 64.7 50 64.0
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.3e-08 63.9 44 63.6


User provided reference genes

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