Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.1e-56 223.0 104 100.0
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 7.9e-36 153.7 104 67.3
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 5.1e-35 151.0 105 65.7
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 4.8e-33 144.4 101 67.3
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 3.2e-29 131.7 106 59.4
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 3.5e-28 128.3 103 56.3
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 6.7e-27 124.0 101 57.4
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 6.7e-27 124.0 118 54.2
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 1.1e-26 123.2 83 63.9
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 1.5e-26 122.9 115 53.9
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 1.5e-26 122.9 104 49.0
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 1.9e-26 122.5 90 57.8
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 5.7e-26 120.9 80 61.2
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 2.1e-25 119.0 97 56.7
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 3.7e-25 118.2 95 52.6
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 6.2e-25 117.5 105 54.3
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.4e-24 116.3 89 57.3
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.8e-24 115.9 87 55.2
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 2.4e-24 115.5 102 52.9
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.4e-24 115.5 87 57.5
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.1e-24 114.8 88 56.8
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 4.1e-24 114.8 111 50.5
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 5.3e-24 114.4 104 51.0
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 1.2e-23 113.2 87 56.3
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 1.2e-23 113.2 71 57.7
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 2.0e-23 112.5 111 49.5
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 2.6e-23 112.1 111 49.5
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 2.6e-23 112.1 105 50.5
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 3.4e-23 111.7 87 55.2
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 4.5e-23 111.3 105 52.4
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 4.5e-23 111.3 109 51.4
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 1.7e-22 109.4 87 54.0
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 1.7e-22 109.4 87 54.0
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 1.7e-22 109.4 87 54.0
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 5.0e-22 107.8 93 55.9
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 5.0e-22 107.8 93 55.9
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 8.4e-22 107.1 83 54.2
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 1.1e-21 106.7 88 52.3
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.1e-21 106.7 105 49.5
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.9e-21 105.9 97 50.5
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.5e-21 105.5 93 54.8
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 1.6e-20 102.8 113 46.0
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 2.1e-20 102.4 92 51.1
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 2.7e-20 102.1 101 51.5
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 3.5e-20 101.7 106 49.1
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 4.6e-20 101.3 110 44.5
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 3.9e-19 98.2 101 46.5
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 6.7e-19 97.4 105 45.7
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 6.7e-19 97.4 105 47.6
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 7.4e-18 94.0 101 45.5
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 4.8e-17 91.3 70 54.3
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 1.1e-16 90.1 70 50.0
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 1.4e-16 89.7 84 45.2
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.4e-16 89.7 67 52.2
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 2.4e-16 89.0 73 47.9
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 4.1e-16 88.2 70 47.1
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 5.3e-16 87.8 70 47.1
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 6.9e-16 87.4 86 45.3
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 9.0e-16 87.0 91 44.0
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 9.0e-16 87.0 91 44.0
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 9.0e-16 87.0 91 44.0
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 9.0e-16 87.0 86 44.2
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 1.5e-15 86.3 95 37.9
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 2.0e-15 85.9 73 47.9
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 2.0e-15 85.9 73 47.9
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 2.0e-15 85.9 73 47.9
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 4.5e-15 84.7 91 42.9
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 4.5e-15 84.7 91 42.9
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 5.9e-15 84.3 93 41.9
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 3.8e-14 81.6 70 45.7
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 3.8e-14 81.6 70 45.7
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 5.0e-14 81.3 94 40.4
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 1.4e-13 79.7 70 48.6
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 3.2e-13 78.6 55 58.2
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 9.4e-13 77.0 63 47.6
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.6e-12 76.3 63 47.6
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.6e-12 76.3 63 47.6
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 2.1e-12 75.9 63 47.6
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 3.9e-11 71.6 94 40.4
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 1.7e-09 66.2 87 33.3


User provided reference genes

Program Settings