Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.I4GW9A Arachis hypogaea HOM05D003584 ORTHO05D004148 1.1e-56 223.0 113 100.0
arahy.Tifrunner.gnm1.ann1.17A2E3 Arachis hypogaea HOM05D003584 ORTHO05D004148 3.6e-50 201.4 104 99.0
arahy.Tifrunner.gnm1.ann1.IVLN14 Arachis hypogaea HOM05D003584 ORTHO05D004148 1.0e-49 199.9 103 99.0
arahy.Tifrunner.gnm1.ann1.QVG73I Arachis hypogaea HOM05D003584 ORTHO05D004148 1.2e-48 196.4 107 94.4
arahy.Tifrunner.gnm1.ann1.KD6WCB Arachis hypogaea HOM05D003584 ORTHO05D004148 9.7e-48 193.4 104 95.2
arahy.Tifrunner.gnm1.ann1.3409IM Arachis hypogaea HOM05D003584 ORTHO05D004148 1.3e-47 193.0 104 95.2
arahy.Tifrunner.gnm1.ann1.3AYS16 Arachis hypogaea HOM05D003584 ORTHO05D004148 2.2e-47 192.2 102 96.1
arahy.Tifrunner.gnm1.ann1.ZE4DKJ Arachis hypogaea HOM05D003584 ORTHO05D004148 2.8e-47 191.8 105 95.2
arahy.Tifrunner.gnm1.ann1.A68QNY Arachis hypogaea HOM05D003584 ORTHO05D004148 4.8e-47 191.0 104 93.3
arahy.Tifrunner.gnm1.ann1.MJT8A2 Arachis hypogaea HOM05D003584 ORTHO05D004148 4.8e-47 191.0 104 93.3
arahy.Tifrunner.gnm1.ann1.N17FYW Arachis hypogaea HOM05D003584 ORTHO05D004148 6.3e-47 190.7 103 96.1
arahy.Tifrunner.gnm1.ann1.GXU96K Arachis hypogaea HOM05D003584 ORTHO05D004148 1.4e-46 189.5 102 95.1
arahy.Tifrunner.gnm1.ann1.X13QWB Arachis hypogaea HOM05D003584 ORTHO05D004148 7.0e-46 187.2 99 96.0
Glyma.04G237000 Glycine max HOM05D003584 ORTHO05D004148 1.6e-45 186.0 100 94.0
arahy.Tifrunner.gnm1.ann1.52KVEJ Arachis hypogaea HOM05D003584 ORTHO05D004148 2.0e-45 185.7 107 90.7
arahy.Tifrunner.gnm1.ann1.DG0EBB Arachis hypogaea HOM05D003584 ORTHO05D004148 2.7e-45 185.3 100 96.0
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 5.9e-45 184.1 114 86.0
TPR.G17292 Trifolium pratense HOM05D003584 ORTHO05D004148 5.9e-45 184.1 104 86.5
arahy.Tifrunner.gnm1.ann1.QAQC1M Arachis hypogaea HOM05D003584 ORTHO05D004148 2.2e-44 182.2 99 94.9
Ca_16694_v3 Cicer arietinum L. HOM05D003584 ORTHO05D004148 2.2e-44 182.2 104 84.6
arahy.Tifrunner.gnm1.ann1.VUN7IK Arachis hypogaea HOM05D003584 ORTHO05D004148 3.8e-44 181.4 104 90.4
Psat5g079040 Pisum sativum HOM05D003584 ORTHO05D004148 3.8e-44 181.4 104 85.6
arahy.Tifrunner.gnm1.ann1.L2A86Z Arachis hypogaea HOM05D003584 ORTHO05D004148 5.0e-44 181.0 100 96.0
Lalb_Chr11g0066741 Lupinus albus HOM05D003584 ORTHO05D004148 5.0e-44 181.0 104 87.5
Medtr3g091190 Medicago truncatula HOM05D003584 ORTHO05D004148 1.1e-43 179.9 104 85.6
Glyma.06G127200 Glycine max HOM05D003584 ORTHO05D004148 1.5e-43 179.5 104 87.5
arahy.Tifrunner.gnm1.ann1.CC8XZU Arachis hypogaea HOM05D003584 ORTHO05D004148 2.5e-43 178.7 96 95.8
Lj1g0024878 Lotus japonicus HOM05D003584 ORTHO05D004148 9.4e-43 176.8 104 83.7
QL12p001817 Quercus lobata HOM05D003584 ORTHO05D004148 4.7e-42 174.5 104 80.8
Ciclev10000923m.g Citrus clementina HOM05D003584 ORTHO05D004148 5.2e-41 171.0 104 78.8
VMungo1309G1861 Vigna mungo HOM05D003584 ORTHO05D004148 5.2e-41 171.0 104 83.7
arahy.Tifrunner.gnm1.ann1.V9HF71 Arachis hypogaea HOM05D003584 ORTHO05D004148 8.8e-41 170.2 100 90.0
FAN08G3577 Fragaria x ananassa HOM05D003584 ORTHO05D004148 3.4e-40 168.3 100 82.0
FAN18G0612 Fragaria x ananassa HOM05D003584 ORTHO05D004148 3.4e-40 168.3 100 82.0
FAN18G4458 Fragaria x ananassa HOM05D003584 ORTHO05D004148 3.4e-40 168.3 100 82.0
Atru.chr7.1538 Acer truncatum HOM05D003584 ORTHO05D004148 4.4e-40 167.9 104 77.9
MELO3C003445.2 Cucumis melo HOM05D003584 ORTHO05D004148 4.4e-40 167.9 100 81.0
FAN04G2190 Fragaria x ananassa HOM05D003584 ORTHO05D004148 7.5e-40 167.2 100 81.0
FvH4_5g23300 Fragaria vesca HOM05D003584 ORTHO05D004148 9.8e-40 166.8 100 81.0
Phvul.009G055300 Phaseolus vulgaris HOM05D003584 ORTHO05D004148 9.8e-40 166.8 104 81.7
Atru.chr6.1539 Acer truncatum HOM05D003584 ORTHO05D004148 1.7e-39 166.0 104 76.0
CsaV3_3G048780 Cucumis sativus L. HOM05D003584 ORTHO05D004148 1.7e-39 166.0 100 80.0
RcHm_v2.0_Chr7g0212251 Rosa chinensis HOM05D003584 ORTHO05D004148 1.7e-39 166.0 104 76.0
FAN13G0019 Fragaria x ananassa HOM05D003584 ORTHO05D004148 2.2e-39 165.6 100 81.0
CiPaw.11G099800 Carya illinoinensis HOM05D003584 ORTHO05D004148 2.8e-39 165.2 100 80.0
ClCG09G011560 Citrullus lanatus HOM05D003584 ORTHO05D004148 6.3e-39 164.1 104 76.0
Sed0004953 Sechium edule HOM05D003584 ORTHO05D004148 1.1e-38 163.3 100 80.0
CSS0011945 Camellia sinensis var. sinensis HOM05D003584 ORTHO05D004148 1.4e-38 162.9 100 78.0
Dinv06917 Davidia involucrata HOM05D003584 ORTHO05D004148 1.4e-38 162.9 104 76.0
CSS0018892 Camellia sinensis var. sinensis HOM05D003584 ORTHO05D004148 1.8e-38 162.5 100 78.0
Dinv29018 Davidia involucrata HOM05D003584 ORTHO05D004148 5.4e-38 161.0 100 78.0
Prupe.5G026300 Prunus persica HOM05D003584 ORTHO05D004148 7.0e-38 160.6 104 75.0
Cpa.g.sc16.4 Carica papaya HOM05D003584 ORTHO05D004148 2.0e-37 159.1 101 72.3
Hma1.2p1_1645F.1_g295410 Hydrangea macrophylla HOM05D003584 ORTHO05D004148 2.0e-37 159.1 100 78.0
Peaxi162Scf00052g00324 Petunia axillaris HOM05D003584 ORTHO05D004148 2.0e-37 159.1 100 74.0
MD09G1247700 Malus domestica HOM05D003584 ORTHO05D004148 2.7e-37 158.7 104 72.1
Potri.003G098100 Populus trichocarpa HOM05D003584 ORTHO05D004148 2.7e-37 158.7 100 79.0
TAR375G1157 Trochodendron aralioides HOM05D003584 ORTHO05D004148 2.7e-37 158.7 100 77.0
Rhsim11G0029400 Rhododendron simsii HOM05D003584 ORTHO05D004148 3.5e-37 158.3 100 76.0
Solyc06g066310.3 Solanum lycopersicum HOM05D003584 ORTHO05D004148 3.5e-37 158.3 100 75.0
arahy.Tifrunner.gnm1.ann1.J43AB2 Arachis hypogaea HOM05D003584 ORTHO05D004148 4.5e-37 157.9 94 87.2
Sopen06g021710 Solanum pennellii HOM05D003584 ORTHO05D004148 4.5e-37 157.9 100 75.0
MD17G1240600 Malus domestica HOM05D003584 ORTHO05D004148 5.9e-37 157.5 104 71.2
Potri.001G135500 Populus trichocarpa HOM05D003584 ORTHO05D004148 5.9e-37 157.5 100 78.0
Actinidia18138 Actinidia chinensis HOM05D003584 ORTHO05D004148 7.7e-37 157.1 100 77.0
Rhsim07G0134000 Rhododendron simsii HOM05D003584 ORTHO05D004148 7.7e-37 157.1 100 76.0
Thecc.03G311600 Theobroma cacao HOM05D003584 ORTHO05D004148 7.7e-37 157.1 100 77.0
Duzib084G0829 Durio zibethinus HOM05D003584 ORTHO05D004148 1.3e-36 156.4 101 76.2
Lj8C319G15 Lonicera japonica HOM05D003584 ORTHO05D004148 1.7e-36 156.0 101 75.2
COL.COLO4_16918 Corchorus olitorius HOM05D003584 ORTHO05D004148 2.2e-36 155.6 100 77.0
Nitab4.5_0002429g0030 Nicotiana tabacum HOM05D003584 ORTHO05D008233 2.2e-36 155.6 100 75.0
CANSAT21G2152 Cannabis sativa HOM05D003584 ORTHO05D004148 2.9e-36 155.2 100 73.0
MBI16_g31266_MAGBIO Magnolia biondii HOM05D003584 ORTHO05D004148 2.9e-36 155.2 103 69.9
TWI81G0829 Tripterygium wilfordii HOM05D003584 ORTHO05D004148 2.9e-36 155.2 104 71.2
TAR636G2924 Trochodendron aralioides HOM05D003584 ORTHO05D004148 2.9e-36 155.2 100 75.0
Actinidia14775 Actinidia chinensis HOM05D003584 ORTHO05D004148 3.8e-36 154.8 100 75.0
Oeu023587.1 Olea europaea HOM05D003584 ORTHO05D004148 3.8e-36 154.8 100 75.0
Nn1g01892 Nelumbo nucifera HOM05D003584 ORTHO05D004148 5.0e-36 154.5 100 76.0
Sabra03G0066500 Salix brachista HOM05D003584 ORTHO05D004148 6.5e-36 154.1 99 77.8
CAN.G474.24 Capsicum annuum HOM05D003584 ORTHO05D004148 8.5e-36 153.7 100 74.0
ClCG10G001230 Citrullus lanatus HOM05D003584 ORTHO05D004148 8.5e-36 153.7 100 75.0
Eucgr.E01312 Eucalyptus grandis HOM05D003584 ORTHO05D004148 8.5e-36 153.7 102 72.5
vmacro14207 Vaccinium macrocarpon HOM05D003584 ORTHO05D004148 8.5e-36 153.7 100 76.0
Oeu031077.4 Olea europaea HOM05D003584 ORTHO05D004148 1.1e-35 153.3 100 76.0
PGR042G1012 Punica granatum HOM05D003584 ORTHO05D004148 1.1e-35 153.3 104 72.1
vmacro22392 Vaccinium macrocarpon HOM05D003584 ORTHO05D004148 1.1e-35 153.3 99 76.8
CSS0034538 Camellia sinensis var. sinensis HOM05D003584 ORTHO05D004148 1.5e-35 152.9 100 75.0
CAN.G773.27 Capsicum annuum HOM05D003584 ORTHO05D004148 1.5e-35 152.9 100 72.0
Manes.08G071412 Manihot esculenta HOM05D003584 ORTHO05D004148 1.5e-35 152.9 100 73.0
arahy.Tifrunner.gnm1.ann1.X8J4LN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.9e-35 152.5 90 85.6
Haze_08130 Corylus avellana HOM05D003584 ORTHO05D004148 1.9e-35 152.5 133 60.2
PGSC0003DMG400009321 Solanum tuberosum HOM05D003584 ORTHO05D004148 1.9e-35 152.5 100 71.0
Peaxi162Scf00185g01121 Petunia axillaris HOM05D003584 ORTHO05D004148 2.5e-35 152.1 100 72.0
Psat5g281560 Pisum sativum HOM05D003584 ORTHO05D004148 2.5e-35 152.1 103 74.8
GSVIVG01013024001 Vitis vinifera HOM05D003584 ORTHO05D004148 2.5e-35 152.1 100 72.0
Duzib205G2005 Durio zibethinus HOM05D003584 ORTHO05D004148 4.2e-35 151.4 101 72.3
arahy.Tifrunner.gnm1.ann1.77ELBP Arachis hypogaea HOM05D003584 ORTHO05D004148 7.2e-35 150.6 103 78.6
Gohir.D12G207800 Gossypium hirsutum HOM05D003584 ORTHO05D004148 7.2e-35 150.6 101 75.2
Gorai.008G223300 Gossypium raimondii HOM05D003584 ORTHO05D004148 7.2e-35 150.6 101 75.2
Solyc08g076140.3 Solanum lycopersicum HOM05D003584 ORTHO05D004148 7.2e-35 150.6 100 71.0
Sopen08g024780 Solanum pennellii HOM05D003584 ORTHO05D004148 9.5e-35 150.2 100 71.0
TWI60G0249 Tripterygium wilfordii HOM05D003584 ORTHO05D004148 9.5e-35 150.2 100 74.0
Migut.A00606 Erythranthe guttata HOM05D003584 ORTHO05D004148 1.6e-34 149.4 100 75.0
HanXRQChr06g0175511 Helianthus annuus HOM05D003584 ORTHO05D004148 2.1e-34 149.1 100 73.0
Gohir.A12G205400 Gossypium hirsutum HOM05D003584 ORTHO05D004148 3.6e-34 148.3 101 75.2
Lj1g0021072 Lotus japonicus HOM05D003584 ORTHO05D004148 6.1e-34 147.5 86 83.7
Lsat_1_v5_gn_6_73200 Lactuca sativa HOM05D003584 ORTHO05D004148 1.0e-33 146.7 103 68.9
SGA_v2.0_scaffold111G31387 Striga asiatica HOM05D003584 ORTHO05D004148 1.0e-33 146.7 100 75.0
HanXRQChr03g0082001 Helianthus annuus HOM05D003584 ORTHO05D004148 1.8e-33 146.0 103 69.9
Hund11168 Selenicereus undatus HOM05D003584 ORTHO05D004148 1.8e-33 146.0 99 71.7
EL10Ac5g11993 Beta vulgaris HOM05D003584 ORTHO05D004148 2.3e-33 145.6 99 69.7
Carub.0001s3023 Capsella rubella HOM05D003584 ORTHO05D004148 2.3e-33 145.6 100 72.0
DCAR_004587 Daucus carota HOM05D003584 ORTHO05D004148 3.0e-33 145.2 101 72.3
AUR62018622 Chenopodium quinoa HOM05D003584 ORTHO05D004148 4.0e-33 144.8 99 70.7
DCAR_004572 Daucus carota HOM05D003584 ORTHO05D004148 4.0e-33 144.8 101 71.3
THA.LOC104798509 Tarenaya hassleriana HOM05D003584 ORTHO05D004148 4.0e-33 144.8 100 72.0
BcaC07g37640 Brassica carinata HOM05D003584 ORTHO05D004148 5.2e-33 144.4 100 71.0
A08p09410 Brassica napus HOM05D003584 ORTHO05D004148 5.2e-33 144.4 100 71.0
BolC8t48013H Brassica oleracea HOM05D003584 ORTHO05D004148 5.2e-33 144.4 100 71.0
BraA08t32940Z Brassica rapa HOM05D003584 ORTHO05D004148 5.2e-33 144.4 100 71.0
Ah.12g055580 Amaranthus hybridus HOM05D003584 ORTHO05D004148 6.8e-33 144.1 99 69.7
Migut.E01323 Erythranthe guttata HOM05D003584 ORTHO05D004148 6.8e-33 144.1 100 72.0
PSO170G5482 Papaver somniferum HOM05D003584 ORTHO05D004148 6.8e-33 144.1 100 69.0
BcaB04g18004 Brassica carinata HOM05D003584 ORTHO05D004148 8.8e-33 143.7 100 70.0
AUR62007367 Chenopodium quinoa HOM05D003584 ORTHO05D004148 1.2e-32 143.3 99 69.7
Aa31LG2G14140 Aethionema arabicum HOM05D003584 ORTHO05D004148 2.0e-32 142.5 100 72.0
BcaB04g17900 Brassica carinata HOM05D003584 ORTHO05D004148 2.6e-32 142.1 100 70.0
CARHR031250 Cardamine hirsuta HOM05D003584 ORTHO05D004148 2.6e-32 142.1 100 71.0
ECA240G0026 Erigeron canadensis HOM05D003584 ORTHO05D004148 2.6e-32 142.1 103 67.0
Cc08_g03790 Coffea canephora HOM05D003584 ORTHO05D004148 3.4e-32 141.7 100 72.0
MSTRG.1794 Avicennia marina HOM05D003584 ORTHO05D004148 5.7e-32 141.0 100 71.0
Thhalv10007477m.g Eutrema salsugineum HOM05D003584 ORTHO05D004148 5.7e-32 141.0 100 70.0
Aqoxy2G01071 Aquilegia oxysepala HOM05D003584 ORTHO05D004148 9.8e-32 140.2 102 65.7
PSO017G0107 Papaver somniferum HOM05D003584 ORTHO05D004148 9.8e-32 140.2 100 68.0
AL1G46000 Arabidopsis lyrata HOM05D003584 ORTHO05D004148 1.3e-31 139.8 100 70.0
AT1G31910 Arabidopsis thaliana HOM05D003584 ORTHO05D004148 3.7e-31 138.3 100 69.0
Sp1g27630 Schrenkiella parvula HOM05D003584 ORTHO05D004148 8.3e-31 137.1 100 69.0
Zm00001eb010900 Zea mays HOM05D003584 ORTHO05D004148 4.1e-30 134.8 104 63.5
Sc07g0008560 Simmondsia chinensis HOM05D003584 ORTHO05D004148 7.0e-30 134.0 99 65.7
Lsat_1_v5_gn_0_9341 Lactuca sativa HOM05D003584 ORTHO05D004148 1.2e-29 133.3 104 63.5
ECA246G3990 Erigeron canadensis HOM05D003584 ORTHO05D004148 1.6e-29 132.9 100 63.0
Os03g0253100 Oryza sativa ssp. japonica HOM05D003584 ORTHO05D004148 2.7e-29 132.1 101 64.4
unitig_748.g7408 Utricularia gibba HOM05D003584 ORTHO05D004148 2.7e-29 132.1 100 69.0
HPP92_020889 Vanilla planifolia HOM05D003584 ORTHO05D004148 2.7e-29 132.1 100 64.0
CDE03G0071 Ceratophyllum demersum HOM05D003584 ORTHO05D004148 7.8e-29 130.6 102 62.7
Zm00001eb398490 Zea mays HOM05D003584 ORTHO05D004148 7.8e-29 130.6 100 64.0
ATR0796G169 Amborella trichopoda HOM05D003584 ORTHO05D004148 1.7e-28 129.4 101 64.4
Nitab4.5_0002897g0030 Nicotiana tabacum HOM05D003584 ORTHO05D004148 3.8e-28 128.3 100 63.0
SEGI_25723 Sequoiadendron giganteum HOM05D003584 ORTHO05D004148 3.4e-24 115.2 102 56.9
arahy.Tifrunner.gnm1.ann1.0FP5K8 Arachis hypogaea HOM05D003584 ORTHO05D004148 8.3e-23 110.5 58 96.6
arahy.Tifrunner.gnm1.ann1.5ESV8I Arachis hypogaea HOM05D003584 ORTHO05D015980 1.4e-22 109.8 58 96.6
arahy.Tifrunner.gnm1.ann1.TJMB8X Arachis hypogaea HOM05D003584 ORTHO05D004148 2.4e-22 109.0 58 96.6
arahy.Tifrunner.gnm1.ann1.YZ31UQ Arachis hypogaea HOM05D003584 ORTHO05D004148 4.1e-22 108.2 55 96.4
arahy.Tifrunner.gnm1.ann1.8HI23N Arachis hypogaea HOM05D003584 ORTHO05D004148 1.6e-21 106.3 53 98.1
CAN.G129.30 Capsicum annuum HOM05D003584 ORTHO05D004148 1.6e-21 106.3 77 66.2
arahy.Tifrunner.gnm1.ann1.880EI2 Arachis hypogaea HOM05D003584 ORTHO05D004148 7.8e-21 104.0 53 96.2
arahy.Tifrunner.gnm1.ann1.CS76E6 Arachis hypogaea HOM05D003584 ORTHO05D004148 7.8e-21 104.0 66 81.8
arahy.Tifrunner.gnm1.ann1.7ZZB5D Arachis hypogaea HOM05D003584 ORTHO05D086657 5.6e-19 97.8 64 81.2
SEGI_33170 Sequoiadendron giganteum HOM05D003584 ORTHO05D004148 9.5e-19 97.1 77 63.6
Pp3c6_2460 Physcomitrium patens HOM05D003584 ORTHO05D004148 1.2e-18 96.7 92 54.3
Mapoly0108s0066 Marchantia polymorpha HOM05D003584 ORTHO05D004148 2.1e-18 95.9 103 53.4
arahy.Tifrunner.gnm1.ann1.NF31AE Arachis hypogaea HOM05D003584 ORTHO05D004148 2.8e-18 95.5 53 90.6
Actinidia29282 Actinidia chinensis HOM05D003584 ORTHO05D004148 2.6e-16 89.0 105 50.5
arahy.Tifrunner.gnm1.ann1.4I5WJB Arachis hypogaea HOM05D003584 ORTHO05D004148 9.8e-16 87.0 55 83.6
arahy.Tifrunner.gnm1.ann1.2S5V57 Arachis hypogaea HOM05D003103 ORTHO05D004148 2.2e-15 85.9 100 54.0
Sabra01G0104900 Salix brachista HOM05D003584 ORTHO05D004148 2.2e-15 85.9 78 57.7
arahy.Tifrunner.gnm1.ann1.RVVF1M Arachis hypogaea HOM05D003584 ORTHO05D004148 3.7e-15 85.1 46 89.1
arahy.Tifrunner.gnm1.ann1.5H0MDK Arachis hypogaea HOM05D003103 ORTHO05D015980 1.1e-14 83.6 100 53.0
SMO351G0538 Selaginella moellendorffii HOM05D003584 ORTHO05D004148 2.4e-14 82.4 87 50.6
Actinidia24579 Actinidia chinensis HOM05D003584 ORTHO05D004148 1.1e-11 73.6 45 80.0
arahy.Tifrunner.gnm1.ann1.DP0IAK Arachis hypogaea HOM05D003103 ORTHO05D013496 1.2e-10 70.1 90 50.0
arahy.Tifrunner.gnm1.ann1.5Y0QX9 Arachis hypogaea HOM05D000121 ORTHO05D000003 2.1e-10 69.3 42 85.7
Sed0001384 Sechium edule HOM05D003584 ORTHO05D004148 3.4e-08 62.0 84 45.2
arahy.Tifrunner.gnm1.ann1.K2RNYS Arachis hypogaea HOM05D003103 ORTHO05D003999 1.3e-07 60.1 33 87.9
arahy.Tifrunner.gnm1.ann1.Y5ZQKW Arachis hypogaea HOM05D003584 ORTHO05D084898 3.7e-07 58.5 32 87.5


User provided reference genes

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