Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HX0PY9 Arachis hypogaea HOM05D002759 ORTHO05D003290 3.9e-207 724.5 359 100.0
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 2.0e-123 446.4 554 50.4
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 2.6e-123 446.0 554 50.2
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 6.2e-80 302.0 556 36.7
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 5.2e-79 298.9 556 37.2
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 2.6e-78 296.6 556 37.1
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 9.9e-78 294.7 556 36.5
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 2.2e-77 293.5 556 37.4
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 4.9e-77 292.4 556 36.7
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 7.1e-76 288.5 571 35.4
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 2.3e-74 283.5 550 36.2
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 6.2e-72 275.4 586 35.2
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.1e-68 264.6 544 35.8
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.1e-68 264.6 544 35.8
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 2.8e-64 250.0 559 34.2
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 3.3e-49 199.9 566 27.6
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 2.6e-46 190.3 545 27.7
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.7e-45 187.6 554 28.3
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 8.4e-45 185.3 569 26.5
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 1.1e-44 184.9 564 27.3
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 5.7e-41 172.6 245 39.2
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 2.1e-40 170.6 234 39.7
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 5.3e-39 166.0 559 25.2
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 5.8e-38 162.5 570 25.1
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 2.2e-37 160.6 568 25.5
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 6.5e-37 159.1 238 40.8
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 4.2e-36 156.4 568 24.3
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 1.6e-35 154.5 568 25.5
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.6e-35 154.5 567 23.8
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 2.7e-35 153.7 238 35.7
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 4.6e-35 152.9 317 35.0
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 4.6e-35 152.9 236 40.3
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 7.9e-35 152.1 568 24.8
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.0e-34 151.8 566 25.4
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 5.1e-34 149.4 560 25.4
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 6.7e-34 149.1 238 36.6
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.1e-33 148.3 568 23.4
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 1.5e-33 147.9 255 36.1
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.9e-33 147.5 234 36.3
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 2.5e-33 147.1 239 35.1
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 7.4e-33 145.6 233 36.1
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.3e-32 144.8 346 31.5
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 1.6e-32 144.4 567 25.0
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 4.8e-32 142.9 237 35.9
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 8.2e-32 142.1 237 36.3
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 4.1e-31 139.8 237 36.3
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 9.0e-31 138.7 244 33.6
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.4e-30 136.7 570 23.9
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 5.9e-30 136.0 338 31.1
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 3.8e-29 133.3 237 35.9
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.1e-28 131.7 235 36.2
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.1e-28 131.7 237 35.0
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 1.1e-28 131.7 235 36.2
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.1e-28 131.7 241 32.0
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 1.1e-28 131.7 576 24.7
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 1.4e-28 131.3 237 35.0
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.4e-28 131.3 237 35.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 2.5e-28 130.6 242 35.5
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 4.2e-28 129.8 237 35.0
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 9.4e-28 128.6 569 23.2
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.2e-27 128.3 570 23.3
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.6e-27 127.9 234 33.3
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.6e-27 127.9 205 37.1
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.6e-27 127.9 238 31.9
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 2.7e-27 127.1 222 36.0
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 2.7e-27 127.1 214 35.0
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 3.6e-27 126.7 235 35.3
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 3.6e-27 126.7 235 35.3
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.3e-26 124.0 521 24.2
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 1.5e-25 121.3 237 34.2
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 7.4e-25 119.0 272 27.6
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 2.8e-24 117.1 237 30.4
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 2.8e-24 117.1 240 32.5
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 6.3e-24 115.9 359 27.0
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 6.3e-24 115.9 235 31.9
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.8e-23 114.4 237 31.2
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 3.1e-23 113.6 461 23.6
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 6.9e-23 112.5 207 35.3
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.5e-22 111.3 214 33.6
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 4.5e-22 109.8 245 31.4
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 5.9e-22 109.4 245 31.4
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 2.2e-21 107.5 235 31.9
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.4e-20 104.8 238 31.5
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 1.4e-20 104.8 214 33.6
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 2.5e-20 104.0 363 24.8
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 2.7e-19 100.5 229 30.1
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 3.6e-19 100.1 181 34.8
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 4.7e-19 99.8 261 28.7
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 4.7e-19 99.8 204 31.4
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 6.1e-19 99.4 202 31.2
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 5.1e-18 96.3 269 28.6
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 2.6e-17 94.0 386 26.9
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.4e-15 87.4 188 30.3
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 7.0e-15 85.9 190 33.7
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 7.0e-15 85.9 245 29.0
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 9.1e-15 85.5 210 30.5
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 1.7e-13 81.3 234 26.1
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 5.0e-13 79.7 209 26.8
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 2.5e-12 77.4 209 28.2
AT5G28550 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 7.2e-12 75.9 175 28.6
MD08G1226100 Malus domestica HOM05D002759 ORTHO05D003290 3.0e-10 70.5 379 25.3
SHI26605 Sapria himalayana HOM05D002759 ORTHO05D003290 1.1e-09 68.6 154 32.5
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 3.3e-09 67.0 269 23.8
SEGI_09272 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 2.8e-08 63.9 242 22.7
SHI26604 Sapria himalayana HOM05D002759 ORTHO05D003290 1.1e-07 62.0 86 41.9
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 4.1e-07 60.1 465 21.1
MD00G1111200 Malus domestica HOM05D002759 ORTHO05D003290 1.6e-06 58.2 154 27.3


User provided reference genes

Program Settings