Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 1.7e-38 162.2 82 100.0
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 3.6e-36 154.5 82 95.1
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 6.2e-12 73.9 96 49.0
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 6.2e-12 73.9 96 49.0
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.8e-11 72.4 110 43.6
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 4.0e-11 71.2 90 50.0
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 5.8e-10 67.4 110 43.6
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 1.3e-09 66.2 96 47.9
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 8.4e-09 63.5 95 45.3
AL4G13410 Arabidopsis lyrata HOM05D010906 ORTHO05D011864 1.4e-08 62.8 82 45.1
Carub.0004s0265 Capsella rubella HOM05D010906 ORTHO05D011864 1.4e-08 62.8 89 44.9
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 3.2e-08 61.6 111 38.7
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 5.5e-08 60.8 54 57.4
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 7.1e-08 60.5 90 46.7
A09p56910 Brassica napus HOM05D010906 ORTHO05D011864 1.6e-07 59.3 84 42.9
BraA09t41083Z Brassica rapa HOM05D010906 ORTHO05D011864 1.6e-07 59.3 84 42.9
Ca_21180_v3 Cicer arietinum L. HOM05D010906 ORTHO05D011864 1.6e-07 59.3 67 47.8
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 1.6e-07 59.3 98 41.8
BcaC07g40985 Brassica carinata HOM05D010906 ORTHO05D011864 2.1e-07 58.9 88 45.5
C08p39870 Brassica napus HOM05D010906 ORTHO05D011864 2.1e-07 58.9 84 42.9
BolC8t51559H Brassica oleracea HOM05D010906 ORTHO05D011864 2.1e-07 58.9 84 42.9
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 2.7e-07 58.5 100 39.0
AT2G23440 Arabidopsis thaliana HOM05D010906 ORTHO05D011864 3.5e-07 58.2 83 41.0
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.5e-07 58.2 108 41.7
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.5e-07 58.2 108 41.7
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 3.5e-07 58.2 110 36.4
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 4.6e-07 57.8 110 36.4
A04p17870 Brassica napus HOM05D010906 ORTHO05D011864 6.1e-07 57.4 85 43.5
BraA04t17407Z Brassica rapa HOM05D010906 ORTHO05D011864 6.1e-07 57.4 85 43.5
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 7.9e-07 57.0 100 37.0
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 7.9e-07 57.0 100 37.0
BolC4t26842H Brassica oleracea HOM05D010906 ORTHO05D011864 7.9e-07 57.0 85 44.7
ECA232G4194 Erigeron canadensis HOM05D008581 ORTHO05D009966 1.0e-06 56.6 43 65.1
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.3e-06 56.2 97 42.3
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 1.8e-06 55.8 100 38.0
C04p52770 Brassica napus HOM05D010906 ORTHO05D011864 2.3e-06 55.5 85 43.5
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.3e-06 55.5 95 41.1
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.3e-06 55.5 95 41.1
BcaB06g27898 Brassica carinata HOM05D010906 ORTHO05D011864 3.0e-06 55.1 65 49.2
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 3.0e-06 55.1 97 41.2
Thhalv10000591m.g Eutrema salsugineum HOM05D010906 ORTHO05D011864 5.1e-06 54.3 86 41.9
Lsat_1_v5_gn_4_167560 Lactuca sativa HOM05D008581 ORTHO05D009966 5.1e-06 54.3 103 36.9


User provided reference genes

Program Settings