Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 6.0e-55 217.2 107 100.0
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 6.0e-55 217.2 107 100.0
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.0e-30 136.7 82 79.3
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.0e-30 136.7 82 79.3
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 1.0e-30 136.7 82 79.3
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 2.3e-30 135.6 82 78.0
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 6.6e-30 134.0 82 79.3
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 8.7e-30 133.7 82 76.8
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.1e-29 133.3 82 74.4
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 2.5e-29 132.1 82 75.6
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 3.3e-29 131.7 82 78.0
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 3.3e-29 131.7 82 74.4
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 3.3e-29 131.7 82 76.8
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 4.3e-29 131.3 82 75.6
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 7.3e-29 130.6 82 73.2
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 7.3e-29 130.6 84 73.8
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 9.6e-29 130.2 82 75.6
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.6e-28 129.4 82 74.4
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.6e-28 129.4 88 68.2
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.6e-28 129.4 78 75.6
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 2.1e-28 129.0 82 73.2
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.8e-28 128.6 79 77.2
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 2.8e-28 128.6 82 74.4
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 4.8e-28 127.9 76 77.6
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 8.1e-28 127.1 72 80.6
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 8.1e-28 127.1 82 73.2
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 2.4e-27 125.6 82 72.0
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 3.1e-27 125.2 81 74.1
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 3.1e-27 125.2 78 73.1
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 4.0e-27 124.8 78 74.4
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 4.0e-27 124.8 86 68.6
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 5.3e-27 124.4 72 79.2
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 6.9e-27 124.0 82 72.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 6.9e-27 124.0 78 73.1
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 6.9e-27 124.0 81 72.8
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 9.0e-27 123.6 82 70.7
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 9.0e-27 123.6 82 69.5
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 9.0e-27 123.6 82 72.0
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.2e-26 123.2 72 80.6
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.2e-26 123.2 75 78.7
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.5e-26 122.9 82 69.5
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.0e-26 122.5 72 77.8
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 2.0e-26 122.5 70 80.0
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 2.0e-26 122.5 79 73.4
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 2.6e-26 122.1 81 67.9
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 2.6e-26 122.1 82 70.7
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 2.6e-26 122.1 72 79.2
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 3.4e-26 121.7 82 70.7
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 3.4e-26 121.7 73 74.0
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 3.4e-26 121.7 71 78.9
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 5.8e-26 120.9 73 74.0
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 7.6e-26 120.6 79 69.6
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 9.9e-26 120.2 82 68.3
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 9.9e-26 120.2 80 70.0
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 1.3e-25 119.8 76 75.0
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.3e-25 119.8 79 72.2
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.3e-25 119.8 80 68.8
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-25 119.8 74 73.0
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-25 119.8 80 68.8
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-25 119.8 80 68.8
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.3e-25 119.8 80 68.8
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.7e-25 119.4 79 70.9
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 1.7e-25 119.4 79 70.9
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.7e-25 119.4 79 70.9
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.7e-25 119.4 79 70.9
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 1.7e-25 119.4 79 70.9
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.7e-25 119.4 72 79.2
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.7e-25 119.4 77 71.4
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.2e-25 119.0 79 72.2
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.2e-25 119.0 76 73.7
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 2.9e-25 118.6 96 62.5
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.8e-25 118.2 79 67.1
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 3.8e-25 118.2 82 68.3
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 6.4e-25 117.5 79 70.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.1e-24 116.7 71 76.1
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.1e-24 116.7 76 72.4
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 1.4e-24 116.3 74 74.3
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.4e-24 115.5 72 75.0
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.4e-24 115.5 72 73.6
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.2e-24 115.2 72 73.6
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 9.3e-24 113.6 75 66.7
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 9.3e-24 113.6 82 67.1
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.2e-23 113.2 71 70.4
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 1.6e-23 112.8 76 67.1
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 2.1e-23 112.5 79 68.4
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 4.6e-23 111.3 72 70.8
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 6.0e-23 110.9 76 65.8
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 6.0e-23 110.9 68 76.5
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 6.0e-23 110.9 69 72.5
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 6.0e-23 110.9 67 73.1
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.0e-22 110.2 72 72.2
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.8e-22 109.4 110 54.5
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.5e-21 106.3 72 68.1
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 3.3e-21 105.1 61 77.0
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.4e-19 99.8 57 80.7
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 2.4e-19 99.0 74 56.8
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 5.8e-18 94.4 55 80.0
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 9.9e-18 93.6 129 42.6
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.7e-17 92.8 76 53.9
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 4.9e-17 91.3 55 78.2
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.1e-16 90.1 65 60.0
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.9e-16 89.4 56 73.2
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.2e-16 88.6 59 67.8
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.2e-15 86.7 55 74.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 2.1e-15 85.9 45 84.4
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 2.7e-15 85.5 69 56.5
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.3e-14 83.2 54 72.2
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 5.6e-13 77.8 56 66.1
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 2.6e-10 68.9 74 43.2
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.0e-09 67.0 79 43.0


User provided reference genes

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