Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 2.0e-106 389.4 244 100.0
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 7.1e-104 380.9 244 98.8
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 1.7e-73 280.0 244 83.2
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 2.5e-72 276.2 244 82.8
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.5e-48 197.2 244 52.9
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 3.7e-44 182.6 244 47.5
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 3.1e-43 179.5 244 55.3
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 4.1e-43 179.1 244 49.2
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 2.7e-42 176.4 244 59.0
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 5.9e-42 175.3 244 53.7
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.9e-41 172.9 237 46.8
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 3.8e-41 172.6 243 44.4
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 3.8e-41 172.6 243 46.5
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.2e-39 167.5 246 45.9
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 4.7e-39 165.6 228 52.6
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 8.0e-39 164.9 240 47.1
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 1.8e-38 163.7 246 47.6
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 2.3e-38 163.3 246 54.9
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 5.7e-37 158.7 232 51.7
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 9.8e-37 157.9 245 44.5
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 1.7e-36 157.1 249 44.2
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.2e-36 156.8 230 47.8
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.2e-36 156.8 231 45.0
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.9e-36 155.6 244 51.6
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.9e-36 155.6 244 51.6
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 4.9e-36 155.6 229 44.5
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 1.1e-35 154.5 228 47.4
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 1.4e-35 154.1 230 53.0
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 3.1e-35 152.9 251 41.0
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 3.1e-35 152.9 231 44.2
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 4.1e-35 152.5 246 42.3
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 7.0e-35 151.8 246 42.7
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 7.0e-35 151.8 246 41.9
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 7.0e-35 151.8 246 41.9
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 1.6e-34 150.6 227 43.2
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.6e-34 150.6 228 47.4
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.6e-34 150.6 228 42.5
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.7e-34 149.8 246 39.8
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.5e-34 149.1 235 43.4
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 5.9e-34 148.7 246 58.5
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 5.9e-34 148.7 232 43.1
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 1.0e-33 147.9 229 46.3
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.3e-33 147.5 229 43.2
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.3e-33 147.5 246 41.9
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 1.3e-33 147.5 246 42.7
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.3e-33 147.5 246 58.9
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.3e-33 147.5 225 43.1
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 2.9e-33 146.4 241 45.6
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 5.0e-33 145.6 230 42.6
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 5.0e-33 145.6 229 41.9
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 6.6e-33 145.2 242 40.9
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.5e-32 144.1 225 42.2
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 1.5e-32 144.1 230 52.6
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.9e-32 143.7 233 40.3
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.9e-32 143.7 242 40.5
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 2.5e-32 143.3 243 44.0
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 2.5e-32 143.3 230 43.0
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 7.3e-32 141.7 244 41.4
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 9.5e-32 141.4 244 38.1
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 1.6e-31 140.6 226 57.1
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.1e-31 140.2 232 40.9
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 2.1e-31 140.2 234 41.5
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 2.8e-31 139.8 230 39.6
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 2.8e-31 139.8 234 53.4
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 4.7e-31 139.0 231 44.2
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 4.7e-31 139.0 230 39.1
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 4.7e-31 139.0 234 53.4
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 8.0e-31 138.3 231 40.3
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 1.0e-30 137.9 240 40.0
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.4e-30 137.5 235 43.0
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 1.8e-30 137.1 241 39.4
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 2.3e-30 136.7 231 43.7
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 2.3e-30 136.7 235 41.7
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.0e-30 136.0 234 40.2
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 1.5e-29 134.0 249 53.4
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 3.4e-29 132.9 226 43.8
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 4.4e-29 132.5 226 43.4
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 5.8e-29 132.1 226 43.8
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 5.8e-29 132.1 226 43.8
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 9.8e-29 131.3 232 40.9
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 1.3e-28 131.0 227 45.4
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 1.3e-28 131.0 254 40.6
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 1.3e-28 131.0 248 42.7
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 1.3e-28 131.0 229 42.8
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.7e-28 130.6 226 50.0
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 3.7e-28 129.4 228 57.0
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 3.7e-28 129.4 238 37.4
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 3.7e-28 129.4 226 45.1
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 4.9e-28 129.0 226 40.7
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 6.4e-28 128.6 250 42.8
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 6.4e-28 128.6 247 44.5
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.1e-27 127.9 226 38.9
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.4e-27 127.5 248 37.1
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 1.9e-27 127.1 226 39.8
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 4.1e-27 125.9 248 48.8
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 1.2e-26 124.4 227 40.1
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 1.6e-26 124.0 226 38.9
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 1.6e-26 124.0 228 45.2
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.0e-26 123.6 228 56.6
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 2.7e-26 123.2 221 38.9
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 4.6e-26 122.5 231 39.0
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.3e-25 120.9 230 38.7
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.7e-25 120.6 227 37.4
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 2.3e-25 120.2 225 36.4
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.1e-24 117.9 237 36.7
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 1.1e-24 117.9 231 36.4
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 9.5e-24 114.8 220 42.3
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 2.8e-23 113.2 137 67.2
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 3.6e-23 112.8 132 50.8
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 4.0e-22 109.4 220 41.4
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 4.0e-22 109.4 220 41.4
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 8.9e-22 108.2 200 36.0
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.7e-20 104.0 230 46.1
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.4e-19 100.9 232 34.5
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.2e-18 97.8 196 38.8
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.0e-17 93.2 137 44.5
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 1.9e-16 90.5 225 33.8
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.1e-14 84.7 197 35.5
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.8e-14 84.0 230 28.7
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 5.2e-14 82.4 121 41.3
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 6.8e-14 82.0 122 41.0
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 8.9e-14 81.6 212 32.5
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 5.8e-13 79.0 226 29.6
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 9.9e-13 78.2 67 62.7
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.2e-11 73.2 238 31.1
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 2.1e-10 70.5 225 26.7
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 7.8e-10 68.6 119 56.3
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 8.6e-09 65.1 213 40.4
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 2.5e-08 63.5 218 26.6
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 4.3e-08 62.8 221 29.4
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.4e-06 57.8 120 31.7
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 8.9e-06 55.1 98 35.7


User provided reference genes

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