Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 6.0e-247 857.1 433 100.0
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 9.6e-237 823.2 431 95.6
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.9e-200 702.6 462 80.7
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.4e-187 659.8 452 75.2
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 3.2e-184 648.7 451 75.2
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 2.7e-183 645.6 432 75.0
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 2.7e-183 645.6 451 74.3
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 8.8e-182 640.6 438 75.1
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 2.1e-175 619.4 449 73.1
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.8e-174 616.3 442 73.5
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 2.4e-171 605.9 437 71.2
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 2.0e-157 559.7 330 85.8
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 2.6e-157 559.3 402 69.4
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 8.3e-156 554.3 394 71.1
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.2e-154 550.4 402 69.2
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 2.7e-154 549.3 400 71.2
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 1.1e-152 543.9 410 68.3
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 2.1e-151 539.7 414 67.1
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 2.8e-151 539.3 401 68.6
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 8.1e-151 537.7 422 66.1
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 6.8e-150 534.6 434 64.5
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 3.4e-149 532.3 395 69.1
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.4e-149 532.3 437 63.4
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 4.4e-149 531.9 417 66.2
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 9.9e-149 530.8 435 64.4
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 8.3e-148 527.7 441 61.9
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.2e-146 523.9 356 73.3
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 3.5e-146 522.3 414 65.9
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 7.8e-146 521.2 436 62.2
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 1.0e-145 520.8 401 68.1
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.3e-145 519.6 405 65.4
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 2.3e-145 519.6 383 69.2
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 1.1e-144 517.3 399 67.4
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 1.1e-144 517.3 434 63.6
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 7.3e-144 514.6 436 62.6
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 9.5e-144 514.2 411 64.5
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 3.6e-143 512.3 400 65.0
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 6.2e-143 511.5 459 59.9
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 1.1e-142 510.8 419 62.1
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.1e-142 510.8 419 64.0
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 4.0e-142 508.8 398 65.3
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 7.6e-141 504.6 402 64.2
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 2.4e-139 499.6 417 63.1
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 2.1e-138 496.5 392 63.3
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 4.6e-138 495.4 403 63.8
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 6.0e-138 495.0 369 67.8
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 3.0e-137 492.7 401 63.1
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 8.7e-137 491.1 398 63.8
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.5e-136 490.3 402 63.2
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.9e-136 490.0 394 63.7
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 3.3e-136 489.2 402 63.2
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 3.2e-131 472.6 397 62.2
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 5.4e-131 471.9 415 59.0
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 5.4e-131 471.9 369 63.4
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 9.3e-131 471.1 397 61.7
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 4.6e-130 468.8 376 62.5
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 4.8e-127 458.8 369 62.3
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 4.8e-127 458.8 392 61.0
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 2.4e-126 456.4 342 68.4
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 5.3e-126 455.3 371 62.5
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 5.3e-126 455.3 393 61.1
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 6.4e-124 448.4 413 58.8
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.1e-120 437.6 397 59.7
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 4.9e-116 422.2 364 60.2
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.9e-115 420.2 304 68.1
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 1.6e-114 417.2 400 57.2
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 8.7e-113 411.4 301 68.8
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.3e-111 407.5 298 68.5
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 4.0e-110 402.5 436 51.1
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.5e-109 400.6 466 52.4
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.0e-108 397.9 286 69.6
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 2.9e-100 369.8 426 49.3
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.8e-97 360.5 367 54.5
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 3.0e-97 359.8 286 62.6
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.7e-92 344.0 391 47.3
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.2e-91 339.3 304 55.3
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.2e-90 337.8 340 50.9
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 1.5e-85 320.9 423 48.0
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 1.6e-77 294.3 206 70.4
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 2.9e-76 290.0 187 76.5
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 2.1e-74 283.9 257 56.4
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.4e-73 281.2 379 43.5
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.3e-73 280.4 420 40.2
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 8.8e-73 278.5 231 60.2
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.4e-70 270.4 218 66.1
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.2e-63 247.3 253 52.6
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 3.5e-61 240.0 186 67.2
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 7.2e-59 232.3 166 66.3
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 1.4e-57 228.0 278 47.8
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.1e-46 191.8 129 76.7
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 5.6e-35 152.9 136 62.5
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 6.0e-29 132.9 123 56.1
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.6e-26 124.8 86 72.1
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 1.6e-26 124.8 127 58.3
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 8.9e-25 119.0 62 95.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.5e-24 118.2 117 54.7
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.4e-22 111.7 85 65.9
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.3e-19 100.5 125 43.2
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.3e-19 100.5 125 43.2
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 2.9e-15 87.4 116 46.6
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 3.8e-15 87.0 87 55.2
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.3e-12 78.6 52 76.9
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 2.8e-10 70.9 42 85.7
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.8e-09 68.2 61 62.3
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 5.8e-08 63.2 58 56.9


User provided reference genes

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