Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HMQ64L Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-171 605.5 310 100.0
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-93 346.3 414 55.3
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-83 313.2 399 51.4
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.1e-80 302.8 419 51.1
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 3.0e-75 286.2 252 64.3
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 7.5e-50 201.8 299 47.8
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.8e-43 180.6 329 43.8
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 7.5e-42 175.3 194 55.7
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.7e-41 172.9 195 46.7
arahy.Tifrunner.gnm1.ann1.IEL8E2 Arachis hypogaea HOM05D002954 ORTHO05D003353 6.8e-35 152.1 132 64.4
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 3.2e-32 143.3 292 38.0
arahy.Tifrunner.gnm1.ann1.D1MK81 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.9e-30 136.3 112 67.9
arahy.Tifrunner.gnm1.ann1.04XLZZ Arachis hypogaea HOM05D002954 ORTHO05D003353 5.6e-29 132.5 182 50.5
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 7.3e-29 132.1 200 37.0
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 2.1e-28 130.6 364 35.2
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.4e-24 117.9 130 50.0
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 3.6e-20 103.2 226 29.6
arahy.Tifrunner.gnm1.ann1.0IB4TY Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-19 101.3 307 34.2
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 3.1e-19 100.1 198 30.8
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 3.1e-19 100.1 191 34.6
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 9.0e-19 98.6 113 55.8
arahy.Tifrunner.gnm1.ann1.WG3QGY Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-18 97.8 85 70.6
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.4e-18 96.3 227 31.3
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 4.4e-18 96.3 227 28.2
TPR.G3822 Trifolium pratense HOM05D002954 ORTHO05D003353 4.4e-18 96.3 120 41.7
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.4e-17 92.0 202 30.7
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 8.4e-17 92.0 144 40.3
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 2.4e-16 90.5 144 39.6
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 2.4e-16 90.5 196 32.7
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 3.2e-16 90.1 209 32.5
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 7.1e-16 89.0 391 26.6
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 2.1e-15 87.4 235 24.7
arahy.Tifrunner.gnm1.ann1.683RJ2 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.0e-14 85.1 150 46.0
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 1.0e-14 85.1 225 25.8
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.3e-14 84.7 233 28.3
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 1.3e-14 84.7 125 44.8
Nitab4.5_0003920g0040 Nicotiana tabacum HOM05D002954 ORTHO05D015034 1.7e-14 84.3 209 29.2
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.3e-14 84.0 219 29.7
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.3e-14 84.0 232 29.7
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 3.0e-14 83.6 245 24.5
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 3.9e-14 83.2 233 28.3
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.9e-14 83.2 156 33.3
Solyc10g150115.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 5.1e-14 82.8 149 36.9
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-13 80.5 216 30.6
arahy.Tifrunner.gnm1.ann1.FX9Q6E Arachis hypogaea HOM05D002954 ORTHO05D003353 3.3e-13 80.1 320 29.1
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 3.3e-13 80.1 126 41.3
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 5.6e-13 79.3 52 63.5
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-12 78.2 162 36.4
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.1e-12 77.4 138 36.2
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.1e-12 77.4 136 39.7
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 2.8e-12 77.0 52 61.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.1e-12 75.5 303 27.7
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-11 75.1 150 31.3
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.4e-11 74.7 61 50.8
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.8e-11 74.3 165 32.7
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 1.8e-11 74.3 115 40.9
TPR.G32610 Trifolium pratense HOM05D002954 ORTHO05D003353 2.4e-11 73.9 79 48.1
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-10 71.6 79 48.1
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.0e-10 70.9 149 29.5
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 3.4e-10 70.1 159 27.0
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 4.5e-10 69.7 146 39.0
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 7.6e-10 68.9 53 54.7
arahy.Tifrunner.gnm1.ann1.3QU67Z Arachis hypogaea HOM05D002954 ORTHO05D003353 1.7e-09 67.8 68 63.2
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 1.7e-09 67.8 55 47.3
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-09 67.8 264 25.4
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.2e-09 67.4 61 49.2
Nitab4.5_0000358g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.9e-09 67.0 53 52.8
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.9e-09 67.0 53 52.8
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 2.9e-09 67.0 280 25.0
arahy.Tifrunner.gnm1.ann1.NBL2GQ Arachis hypogaea HOM05D009662 ORTHO05D003353 3.8e-09 66.6 116 43.1
Nitab4.5_0010215g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.8e-09 66.6 61 39.3
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-08 65.1 146 34.2
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 1.1e-08 65.1 135 30.4
arahy.Tifrunner.gnm1.ann1.2WW1WS Arachis hypogaea HOM05D009662 ORTHO05D003353 1.4e-08 64.7 118 39.8
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.9e-08 64.3 219 26.5
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.4e-08 63.9 173 27.7
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 2.4e-08 63.9 173 27.7
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.2e-08 63.5 123 33.3
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 3.2e-08 63.5 173 26.6
arahy.Tifrunner.gnm1.ann1.41X87M Arachis hypogaea HOM05D009662 ORTHO05D003353 7.1e-08 62.4 114 41.2
arahy.Tifrunner.gnm1.ann1.Q0XRI0 Arachis hypogaea HOM05D002954 ORTHO05D003353 7.1e-08 62.4 67 61.2
arahy.Tifrunner.gnm1.ann1.4Q4EL1 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.2e-07 61.6 62 64.5
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 2.1e-07 60.8 149 29.5
arahy.Tifrunner.gnm1.ann1.FG1AAR Arachis hypogaea HOM05D009662 ORTHO05D003353 2.7e-07 60.5 69 55.1
arahy.Tifrunner.gnm1.ann1.1E7WKS Arachis hypogaea HOM05D002954 ORTHO05D003353 3.5e-07 60.1 63 61.9
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.5e-07 60.1 62 40.3
PGSC0003DMG400007737 Solanum tuberosum HOM05D002131 ORTHO05D015034 3.5e-07 60.1 99 33.3
arahy.Tifrunner.gnm1.ann1.1S2QVS Arachis hypogaea HOM05D009662 ORTHO05D003353 4.6e-07 59.7 112 40.2
arahy.Tifrunner.gnm1.ann1.VKQ8LP Arachis hypogaea HOM05D009662 ORTHO05D003353 4.6e-07 59.7 113 45.1
arahy.Tifrunner.gnm1.ann1.XG7NYG Arachis hypogaea HOM05D009662 ORTHO05D003353 4.6e-07 59.7 112 40.2
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-06 58.5 241 25.7
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-06 58.5 131 30.5
Sopen09g012940 Solanum pennellii HOM05D009662 ORTHO05D000034 1.0e-06 58.5 98 37.8
arahy.Tifrunner.gnm1.ann1.4EB8G0 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.3e-06 58.2 112 40.2
arahy.Tifrunner.gnm1.ann1.JC8RXL Arachis hypogaea HOM05D009662 ORTHO05D003353 1.3e-06 58.2 120 38.3
PGSC0003DMG400040446 Solanum tuberosum HOM05D002954 ORTHO05D003353 1.8e-06 57.8 77 39.0
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 2.3e-06 57.4 83 32.5
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.0e-06 57.0 52 40.4
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.9e-06 56.6 134 30.6
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 3.9e-06 56.6 190 25.3
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-06 56.2 216 25.0
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 8.7e-06 55.5 122 30.3


User provided reference genes

Program Settings