Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HM2X2W Arachis hypogaea HOM05D006163 ORTHO05D007625 5.4e-122 441.0 226 100.0
arahy.Tifrunner.gnm1.ann1.SAF13J Arachis hypogaea HOM05D006163 ORTHO05D007625 2.8e-102 375.6 226 88.1
arahy.Tifrunner.gnm1.ann1.8Q7Z1Z Arachis hypogaea HOM05D006163 ORTHO05D007625 2.3e-101 372.5 227 86.8
arahy.Tifrunner.gnm1.ann1.D5BHID Arachis hypogaea HOM05D006163 ORTHO05D007625 2.6e-100 369.0 227 85.9
arahy.Tifrunner.gnm1.ann1.A5X75G Arachis hypogaea HOM05D006163 ORTHO05D007625 3.3e-95 352.1 227 83.3
arahy.Tifrunner.gnm1.ann1.14ZLQ3 Arachis hypogaea HOM05D006163 ORTHO05D007625 2.9e-83 312.4 195 84.1
Ca_18951_v3 Cicer arietinum L. HOM05D006163 ORTHO05D007625 4.9e-83 311.6 229 72.9
Psat7g170000 Pisum sativum HOM05D006163 ORTHO05D007625 3.2e-82 308.9 229 72.9
Lalb_Chr19g0140021 Lupinus albus HOM05D006163 ORTHO05D007625 2.1e-81 306.2 227 70.5
Glyma.12G016500 Glycine max HOM05D006163 ORTHO05D007625 5.1e-80 301.6 228 72.4
Glyma.11G108900 Glycine max HOM05D006163 ORTHO05D007625 8.7e-80 300.8 228 71.9
VMungo1127G1084 Vigna mungo HOM05D006163 ORTHO05D007625 1.5e-79 300.1 227 70.5
Phvul.011G018700 Phaseolus vulgaris HOM05D006163 ORTHO05D007625 1.9e-79 299.7 225 70.2
Medtr4g078150 Medicago truncatula HOM05D006163 ORTHO05D007625 4.3e-79 298.5 221 72.4
RcHm_v2.0_Chr1g0384531 Rosa chinensis HOM05D006163 ORTHO05D007625 2.4e-77 292.7 227 67.4
Lj3g0017647 Lotus japonicus HOM05D006163 ORTHO05D007625 3.1e-77 292.4 216 73.6
TPR.G28026 Trifolium pratense HOM05D006163 ORTHO05D007625 3.1e-77 292.4 221 71.0
COL.COLO4_15169 Corchorus olitorius HOM05D006163 ORTHO05D007625 5.3e-77 291.6 229 65.1
Haze_00381 Corylus avellana HOM05D006163 ORTHO05D007625 6.9e-77 291.2 228 65.4
FvH4_7g34180 Fragaria vesca HOM05D006163 ORTHO05D007625 2.0e-76 289.7 227 66.5
FAN01G0917 Fragaria x ananassa HOM05D006163 ORTHO05D007625 2.0e-76 289.7 227 66.5
Potri.013G078600 Populus trichocarpa HOM05D006163 ORTHO05D007625 3.4e-76 288.9 229 65.9
Prupe.2G328500 Prunus persica HOM05D006163 ORTHO05D007625 3.4e-76 288.9 227 65.6
FAN10G0627 Fragaria x ananassa HOM05D006163 ORTHO05D007625 4.4e-76 288.5 226 66.8
FAN03G2098 Fragaria x ananassa HOM05D006163 ORTHO05D007625 5.8e-76 288.1 227 66.1
Gohir.D03G053900 Gossypium hirsutum HOM05D006163 ORTHO05D007625 7.6e-76 287.7 230 63.0
Cfa016068 Carpinus fangiana HOM05D006163 ORTHO05D007625 1.3e-75 287.0 228 64.9
Gorai.003G056400 Gossypium raimondii HOM05D006163 ORTHO05D007625 1.3e-75 287.0 230 63.0
TAR375G0677 Trochodendron aralioides HOM05D006163 ORTHO05D007625 1.3e-75 287.0 227 65.2
Atru.chr12.1903 Acer truncatum HOM05D006163 ORTHO05D007625 1.7e-75 286.6 229 63.8
Atru.chr12.1911 Acer truncatum HOM05D006163 ORTHO05D007625 1.7e-75 286.6 229 63.8
CiPaw.05G214500 Carya illinoinensis HOM05D006163 ORTHO05D007625 2.2e-75 286.2 227 66.1
GSVIVG01024341001 Vitis vinifera HOM05D006163 ORTHO05D007625 2.9e-75 285.8 228 65.8
Manes.09G128800 Manihot esculenta HOM05D006163 ORTHO05D007625 3.8e-75 285.4 229 66.4
Thecc.05G221400 Theobroma cacao HOM05D006163 ORTHO05D007625 8.4e-75 284.3 229 64.2
Ciclev10031395m.g Citrus clementina HOM05D006163 ORTHO05D007625 1.1e-74 283.9 229 63.8
Duzib177G0052 Durio zibethinus HOM05D006163 ORTHO05D007625 1.9e-74 283.1 229 63.8
MD07G1310500 Malus domestica HOM05D006163 ORTHO05D007625 1.9e-74 283.1 227 65.2
CSS0011721 Camellia sinensis var. sinensis HOM05D006163 ORTHO05D007625 4.2e-74 282.0 229 64.6
CSS0040571 Camellia sinensis var. sinensis HOM05D006163 ORTHO05D007625 4.2e-74 282.0 229 64.6
Gohir.A02G127100 Gossypium hirsutum HOM05D006163 ORTHO05D007625 4.2e-74 282.0 230 62.6
THA.LOC104821716 Tarenaya hassleriana HOM05D006163 ORTHO05D007625 4.2e-74 282.0 229 62.0
QL09p021166 Quercus lobata HOM05D006163 ORTHO05D007625 9.3e-74 280.8 228 64.9
Duzib128G1201 Durio zibethinus HOM05D006163 ORTHO05D007625 1.2e-73 280.4 227 62.6
PGSC0003DMG400026470 Solanum tuberosum HOM05D006163 ORTHO05D007625 1.2e-73 280.4 228 63.2
PSO782G2449 Papaver somniferum HOM05D006163 ORTHO05D007625 2.1e-73 279.6 230 64.3
TAR636G3625 Trochodendron aralioides HOM05D006163 ORTHO05D007625 2.7e-73 279.3 229 64.2
Peaxi162Scf00516g00670 Petunia axillaris HOM05D006163 ORTHO05D007625 6.0e-73 278.1 225 63.1
MBI04_g22924_MAGBIO Magnolia biondii HOM05D006163 ORTHO05D007625 7.9e-73 277.7 228 62.7
Nitab4.5_0000021g0780 Nicotiana tabacum HOM05D006163 ORTHO05D007625 7.9e-73 277.7 228 62.3
CAN.G1131.33 Capsicum annuum HOM05D006163 ORTHO05D007625 1.0e-72 277.3 226 63.7
Nitab4.5_0004530g0040 Nicotiana tabacum HOM05D006163 ORTHO05D007625 1.3e-72 276.9 228 62.3
THA.LOC104823799 Tarenaya hassleriana HOM05D006163 ORTHO05D007625 3.0e-72 275.8 229 60.7
TWI34G1340 Tripterygium wilfordii HOM05D006163 ORTHO05D007625 5.1e-72 275.0 229 62.9
CANSAT21G1837 Cannabis sativa HOM05D006163 ORTHO05D007625 6.6e-72 274.6 233 61.8
AUR62002085 Chenopodium quinoa HOM05D006163 ORTHO05D007625 6.6e-72 274.6 209 66.0
Actinidia08761 Actinidia chinensis HOM05D006163 ORTHO05D007625 8.7e-72 274.2 229 62.9
PSO063G3404 Papaver somniferum HOM05D006163 ORTHO05D007625 8.7e-72 274.2 230 63.0
Nn1g00138 Nelumbo nucifera HOM05D006163 ORTHO05D007625 1.5e-71 273.5 227 62.6
PGR042G2551 Punica granatum HOM05D006163 ORTHO05D007625 1.5e-71 273.5 227 60.4
Rhsim03G0223500 Rhododendron simsii HOM05D006163 ORTHO05D007625 1.5e-71 273.5 229 62.9
AUR62028203 Chenopodium quinoa HOM05D006163 ORTHO05D007625 2.5e-71 272.7 209 65.6
CsaV3_3G050100 Cucumis sativus L. HOM05D006163 ORTHO05D007625 4.3e-71 271.9 223 61.9
Actinidia34326 Actinidia chinensis HOM05D006163 ORTHO05D007625 5.6e-71 271.6 229 62.0
A03p57370 Brassica napus HOM05D006163 ORTHO05D007625 5.6e-71 271.6 220 61.4
BraA03t14803Z Brassica rapa HOM05D006163 ORTHO05D007625 5.6e-71 271.6 220 61.4
Eucgr.A02987 Eucalyptus grandis HOM05D006163 ORTHO05D007625 5.6e-71 271.6 229 59.8
BcaC06g32679 Brassica carinata HOM05D006163 ORTHO05D007625 9.6e-71 270.8 220 61.4
C07p55580 Brassica napus HOM05D006163 ORTHO05D007625 9.6e-71 270.8 220 61.4
BolC7t46037H Brassica oleracea HOM05D006163 ORTHO05D007625 9.6e-71 270.8 220 61.4
Sed0018021 Sechium edule HOM05D006163 ORTHO05D007625 9.6e-71 270.8 223 61.4
MELO3C003308.2 Cucumis melo HOM05D006163 ORTHO05D007625 1.3e-70 270.4 223 61.4
vmacro06384 Vaccinium macrocarpon HOM05D006163 ORTHO05D007625 1.6e-70 270.0 251 57.0
CANSAT35G0373 Cannabis sativa HOM05D006163 ORTHO05D007625 2.8e-70 269.2 235 60.4
ClCG09G013140 Citrullus lanatus HOM05D006163 ORTHO05D007625 2.8e-70 269.2 223 60.5
Solyc03g097210.3 Solanum lycopersicum HOM05D006163 ORTHO05D007625 1.8e-69 266.5 209 63.6
Lj3A885T47 Lonicera japonica HOM05D006163 ORTHO05D007625 2.4e-69 266.2 227 61.2
Nn6g33561 Nelumbo nucifera HOM05D006163 ORTHO05D007625 2.4e-69 266.2 227 59.9
Sed0010720 Sechium edule HOM05D006163 ORTHO05D007625 2.4e-69 266.2 223 61.4
Sopen03g027970 Solanum pennellii HOM05D006163 ORTHO05D007625 3.1e-69 265.8 209 63.6
Thhalv10025109m.g Eutrema salsugineum HOM05D006163 ORTHO05D007625 4.0e-69 265.4 222 60.8
BcaNung01655 Brassica carinata HOM05D006163 ORTHO05D007625 5.3e-69 265.0 222 60.8
CARHR235300 Cardamine hirsuta HOM05D006163 ORTHO05D007625 5.3e-69 265.0 222 59.9
AL7G25120 Arabidopsis lyrata HOM05D006163 ORTHO05D007625 6.9e-69 264.6 221 61.1
AT4G27600 Arabidopsis thaliana HOM05D006163 ORTHO05D007625 6.9e-69 264.6 221 61.1
Migut.H00007 Erythranthe guttata HOM05D006163 ORTHO05D007625 6.9e-69 264.6 230 59.6
A01p18840 Brassica napus HOM05D006163 ORTHO05D007625 9.0e-69 264.2 222 60.8
BraA01t01827Z Brassica rapa HOM05D006163 ORTHO05D007625 9.0e-69 264.2 222 60.8
Carub.0007s1325 Capsella rubella HOM05D006163 ORTHO05D007625 1.2e-68 263.8 221 60.6
Hund09806 Selenicereus undatus HOM05D006163 ORTHO05D007625 1.2e-68 263.8 209 63.6
Aa31LG9G8200 Aethionema arabicum HOM05D006163 ORTHO05D007625 2.0e-68 263.1 229 58.1
MSTRG.8568 Avicennia marina HOM05D006163 ORTHO05D007625 2.6e-68 262.7 229 60.3
BcaC09g50576 Brassica carinata HOM05D006163 ORTHO05D007625 4.5e-68 261.9 222 60.4
Ah.13g072360 Amaranthus hybridus HOM05D006163 ORTHO05D007625 9.9e-68 260.8 206 65.0
Sp7g25550 Schrenkiella parvula HOM05D006163 ORTHO05D007625 1.7e-67 260.0 222 59.9
Sc13g0010940 Simmondsia chinensis HOM05D006163 ORTHO05D007625 2.2e-67 259.6 210 64.3
HanXRQChr17g0560551 Helianthus annuus HOM05D006163 ORTHO05D007625 2.9e-67 259.2 229 59.0
ECA233G4936 Erigeron canadensis HOM05D006163 ORTHO05D007625 3.8e-67 258.8 229 58.5
Hma1.2p1_0649F.1_g195200 Hydrangea macrophylla HOM05D006163 ORTHO05D007625 4.9e-67 258.5 226 61.5
Cpa.g.c31592 Carica papaya HOM05D006163 ORTHO05D007625 2.4e-66 256.1 214 60.7
DCAR_010527 Daucus carota HOM05D006163 ORTHO05D007625 4.2e-66 255.4 210 62.4
Aqoxy3G02310 Aquilegia oxysepala HOM05D006163 ORTHO05D007625 9.3e-66 254.2 221 60.2
Cc02_g00150 Coffea canephora HOM05D006163 ORTHO05D007625 4.6e-65 251.9 214 61.7
SGA_v2.0_scaffold34G13939 Striga asiatica HOM05D006163 ORTHO05D007625 6.0e-65 251.5 213 60.6
Os10g0573000 Oryza sativa ssp. japonica HOM05D006163 ORTHO05D007625 1.1e-63 247.3 226 57.1
SGA_v2.0_scaffold70G23507 Striga asiatica HOM05D006163 ORTHO05D007625 6.2e-62 241.5 212 59.4
Lsat_1_v5_gn_8_142440 Lactuca sativa HOM05D006163 ORTHO05D007625 4.0e-61 238.8 227 55.9
HPP92_002586 Vanilla planifolia HOM05D006163 ORTHO05D007625 5.3e-61 238.4 228 56.1
Zm00001eb024550 Zea mays HOM05D006163 ORTHO05D007625 2.6e-60 236.1 213 57.7
ATR0057G079 Amborella trichopoda HOM05D006163 ORTHO05D007625 3.4e-60 235.7 223 54.7
Dinv29134 Davidia involucrata HOM05D006163 ORTHO05D007625 2.5e-58 229.6 192 60.9
unitig_747.g21710 Utricularia gibba HOM05D006163 ORTHO05D007625 2.5e-58 229.6 219 57.1
SEGI_27900 Sequoiadendron giganteum HOM05D006163 ORTHO05D007625 5.5e-58 228.4 232 52.6
EL10Ac3g05052 Beta vulgaris HOM05D006163 ORTHO05D007625 9.3e-58 227.6 209 56.9
AagrBONN_evm.TU.Sc2ySwM_344.936 Anthoceros agrestis HOM05D006163 ORTHO05D007625 9.0e-53 211.1 207 53.1
Pp3c17_23450 Physcomitrium patens HOM05D006163 ORTHO05D007625 2.0e-52 209.9 205 52.2
Mapoly0014s0025 Marchantia polymorpha HOM05D006163 ORTHO05D007625 4.5e-52 208.8 205 53.7
Pp3c2_520 Physcomitrium patens HOM05D006163 ORTHO05D007625 1.7e-51 206.8 205 52.2
Pp3c14_24300 Physcomitrium patens HOM05D006163 ORTHO05D007625 4.2e-50 202.2 205 50.7
SMO139G0077 Selaginella moellendorffii HOM05D006163 ORTHO05D007625 9.7e-47 191.0 211 48.8
THA.LOC104824563 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 1.0e-27 127.9 184 39.7
C01p23770 Brassica napus HOM05D006163 ORTHO05D007625 5.5e-26 122.1 112 56.2
BolC1t02328H Brassica oleracea HOM05D006163 ORTHO05D007625 2.7e-25 119.8 112 55.4
BcaB03g12539 Brassica carinata HOM05D006163 ORTHO05D007625 2.0e-20 103.6 72 68.1
CDE11G0223 Ceratophyllum demersum HOM05D006163 ORTHO05D007625 2.0e-20 103.6 97 54.6
Cre03.g185850 Chlamydomonas reinhardtii HOM05D006163 ORTHO05D007625 1.2e-15 87.8 234 28.2
Mapoly0012s0094 Marchantia polymorpha HOM05D004293 ORTHO05D005044 1.8e-08 63.9 150 30.0


User provided reference genes

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